Garra rufa (doctor fish): 141334694
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Entry
141334694 CDS
T11039
Symbol
grin1b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04020
Calcium signaling pathway
grf04080
Neuroactive ligand-receptor interaction
grf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
141334694 (grin1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
141334694 (grin1b)
04082 Neuroactive ligand signaling
141334694 (grin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141334694 (grin1b)
Ion channels [BR:
grf04040
]
Ligand-gated channels
Glutamate (ionotropic)
141334694 (grin1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
SIP
DUF6724
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
141334694
NCBI-ProteinID:
XP_073695996
LinkDB
All DBs
Position
5:35180432..35215420
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AA seq
937 aa
AA seq
DB search
MRLVLFAFLISCSCARGGCEPKTVNIGAVLSQKRYEQVFKDAVTQANNIYGKDKFKMNAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAQVWFDMMREFQWNHIILIVSDDHEGRAAQKRLETL
LEERETKSKNRNYENLDQLSFDNKRGPKAEKVLLFSQDTNLTALLQEAKELEARVIILSA
SEDEAAAIYKSARQLNMTGSGYVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAHIYD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPDGLTGRVEFNDD
GDRRFAHYSILNYQKTRLVQVGVYNGSQVVMNTQRKIIWPGGETEKPKGYQMSTRLKIVT
IHQEPFVYVKPTLRDGTCKEEYTVNGVLIKKVICTGPNETIPGRPIVPQCCYGFCIDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
VAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKASFRSIS
TNLASNIKRRRSSKDTPYPTDITGQLNLSDPSVSTVV
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctggttctgttcgccttcctcatctcgtgctcctgtgcgagaggcggatgcgaa
cccaagactgtgaacatcggggctgtcctgagccagaagagatacgaacaagtgttcaaa
gacgctgtcacccaagccaacaatatttacggcaaagataagttcaagatgaacgctatt
tcagtcacccataaaccaaacgccatccagatggcactctccgtatgtgaggatctcatc
tccaaccaggtgtatgcaatcttggtgagccacccgccccagtccaacgatcatctgact
cccaccccggtgtcttacactgctgggttttaccgtatccctgtagtgggcctcaccacc
cgcatgtccatctactcggataagagcatccacctctccttcctgcgcacggtgccaccc
tattcccaccaagcccaagtgtggtttgacatgatgcgtgagttccagtggaatcacatc
atcctgattgtgagcgatgaccacgagggcagagcggcacagaaaagattggaaaccctg
ctggaggaaagggagacgaagagtaaaaacaggaactatgaaaacctcgaccaactgtcc
tttgacaacaagcgaggacccaaggcagagaaagtgctcctgttcagccaagacacaaat
ctgacggctctgctccaggaagccaaagagctagaggcccgagttatcattctgtccgca
agtgaagacgaagccgcagccatttacaaatctgcgcgccagctcaatatgacaggctcc
ggttatgtgtggctggttggagaaagggagatgtctggtaaagcactgagtgaagcccca
gatggcttgctcggccttcagcttatcaatggcaagaacgagtcggcgcacatctacgat
gccgtggctgtggtggcccagtcgattcaggagctctttgagaaggagaatatcacagag
cctcctcgaggctgtgttggcaatacaaacatctggaagactggcccactcttcaaacga
gtgctgatgtcatccaagtatccagatggcctgacaggccgcgtggagtttaatgatgac
ggagacaggaggttcgcccactacagcattctgaactaccagaaaacccggctggtgcaa
gtgggcgtctacaatggctcgcaagttgtaatgaacactcagaggaagattatttggcca
ggaggagagactgaaaagccaaagggatatcagatgtcaacaagattaaagattgtcacc
attcatcaagagccctttgtctatgtgaaaccaacactaagagatggaacatgtaaagaa
gagtacactgtaaatggagtcttgatcaaaaaagtgatctgcacaggccctaatgagacc
attccaggtcgccccatagtgcctcagtgctgctatggcttctgcattgaccttttgatc
aaacttgcaatgacaatgaacttcacctatgaagtgcatctagtggctgatggcaaattt
ggcactcaggagcgtgtaaataacagcaacaagaaggagtggaatggcatgatgggagag
ctcctgagtggcttggcagacatgatcgtggctccacttacaatcaacaatgaacgagcc
cagtatatagagttctcaaaaccgtttaagtaccaagggctcacaatacttgtcaaaaag
gaaataccacgcagtacactggactcgttcatgcagccttttcagagcactctgtggtta
ctggtgggtctatcggtccatgttgtggcggtgatgctctacctattagaccgtttcagc
ccgtttggaaggtttaaagtaaatagtgaagaggaagaagaagatgccctcaccttatcc
tctgctatgtggttctcctggggtgtacttttgaactccggcattggagaaggtgcccct
cggagcttttcagcaaggattttaggtatggtgtgggctggttttgctatgattatagtt
gcgtcctatactgccaatttggcagccttcctagtgctggatcggcctgaggagcgcatt
accggcatcaacgaccctaggctgcgaaacccatcagacaagttcatctacgccacagtg
aagcagagctctgtggacatttacttccggcgccaagttgagctaagcaccatgtaccgc
cacatggaaaagcacaactacgagagcgctgctgaagccatccaggccgtgcgagacaac
aaactccacgcgtttatatgggattcagcagtgttggagtttgaggcctcgcaaaaatgt
gacctggtcaccacaggagagctgttcttccgctctggattcggtatcggtatgcgtaaa
gacagcccatggaagcaaaatgtctcactggccatcctcagttcccatgagaatggcttc
atggaggacttggataaaacctgggtccgttatcaggagtgcgactccagaagcaatgca
ccagccacgctcacttttgagaatatggcaggcgtgtttatgttggtggctggtggcatc
gttgccgggatcttcctcatcttcattgagattgcatacaagcgacacaaggatgcacgc
aggaagcagatgcagctggcttttgcagcagttaacgtctggaggaagaacctacaggat
aggaaaagtggtagagcagagcccgaccccaaaaagaaagcctcttttaggtccatcagt
accaacctggcctccaacatcaagagacgtaggtcgtccaaagacacgccatatcccacg
gacattaccggccagctcaacctgtcagacccctctgtgagcacagtggtgtga
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