KEGG   Garra rufa (doctor fish): 141334701
Entry
141334701         CDS       T11039                                 
Symbol
tsc1a
Name
(RefSeq) TSC complex subunit 1a isoform X1
  KO
K07206  tuberous sclerosis 1
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04140  Autophagy - animal
grf04150  mTOR signaling pathway
grf04218  Cellular senescence
grf04910  Insulin signaling pathway
grf05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:grf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    141334701 (tsc1a)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    141334701 (tsc1a)
  09143 Cell growth and death
   04218 Cellular senescence
    141334701 (tsc1a)
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    141334701 (tsc1a)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    141334701 (tsc1a)
SSDB
Motif
Pfam: Hamartin SPATA1_C DUF948
Other DBs
NCBI-GeneID: 141334701
NCBI-ProteinID: XP_073696008
LinkDB
Position
5:complement(35148918..35169159)
AA seq 1146 aa
MAKDQPNVFDLVPLLGSTDLQELEQVKNLLQETLSADKGTMLLNSLVEYFQETSSSQAVD
ILSSVREPHDKYLLDKMNECMGKQSCRLSTITLLGHIVRKQPPWIHKIARFPLLASLLKC
LKTDSDVVVLITGVLVLIALLPMIPQTNKQLLCEYFDIFGRLAAWNQRHPGHAHGVFAVH
LHASVYSLFHRLYGMYPCNFISYLRAHYSMKENVDTFEEVVKPMLEYVRIHPELITGTKD
YEVDPIRWKRFEPHDIVIECAKISLDSKEASSEEGYSSLSDHIPRRPVDHSRSCSELSIH
EATSVTQMAVVRQSLSLSLPYLTVTQDSGSSAQTPNHQSDGMNSSGTKEEMWSPSSMCGM
TTPPSSRGMSPTTVSDISHSASHLSGRIPSISGDGKWPLSPSTPSGSSPLPSLSEEIGQP
AQNTSSTQAKVIQSGKELRKVTPRSINNNGGASDAKTPVSLAQLSDIVKRTDGEREDDTI
NEEILSLTHGKLDFGTRPGMDSSFSGSLDTLLSSHPSHEQNLVSTPDRVELSAKGGEQQT
WFLWPAFTPIENGKSSKCSLSDLTKESMPYEPLFDLALPKVASLFLERKTAEAIRRAEEE
SGHREELEGEDLSATSPLEVLDRVIQQGHETHEKVLKRTLSSQSQSSDTHSGGKQHSNKG
KGAVSAASDELGMLRSQLLLLHSQLLYERHKREQHALRNRRLFGRIVNTTALEEQNNSMK
TQLKLQDIEIQTVQVSLKEEQRRSKHIQEDRNALVNQLQTQIQQLKKERNDYYSKMQELK
SDLQENQKKVGEMEAELQKANNKVCNMGHMLSQLSIKLNNSENMEQQMAFLNKQLLLLGE
ANKLCVEEIDRLGPEASKELNMLQASSLREAERLKQSSLQQSQRLEAAQQRITDLETQLT
KKEQVIREQKKLLENVKSQSTEQLQASENRYLAQKHITQALQSELLELYSQIELYSQIEL
KNLNTKSPAEPTSEPSSPTNQRPNGNSTGPSAQSLSADPMKKEEGMHVCVNGVISAGSPP
TPTALINGSQEEDLSALTRSFPALPCNSPLAVGSYPSTGSFLGKRAREMFRNKSESHYEG
EPTTFTCLSKDLKVEPITDPTETVEFEEATEQADLQPMDRPRAYNIHRRRQQDLRIMDYN
ETHHEH
NT seq 3441 nt   +upstreamnt  +downstreamnt
atggccaaagaccagccaaatgtgttcgacctcgtccctcttctgggctccactgaccta
caagagctggagcaggtcaaaaacctgctgcaggaaacactcagcgcagataaagggacc
atgttgctgaatagccttgtggagtatttccaggagacaagctcatctcaagctgtggac
atcctgtcttctgtcagggagccccatgataagtatcttttagataagatgaatgaatgc
atgggcaagcagagctgccgtctctccaccatcaccctccttggccatattgttcgcaag
cagccaccatggatccacaagatcgctcgcttccctttgcttgcctcgctgctcaaatgc
ctcaagactgactctgatgttgtagttctcataactggtgtgctggtgttgattgctctg
cttcccatgattcctcaaaccaacaaacaacttctgtgcgagtactttgatatctttgga
aggcttgctgcctggaaccaacgtcacccaggtcatgctcacggagtgtttgcagtccat
ctacatgccagcgtatactcgctttttcatcgtctatatggcatgtatccctgtaatttc
atttcttacttgcgtgcccactacagtatgaaagaaaatgttgacacatttgaggaagtg
gttaagcccatgttagagtatgtacggatacatcctgagctcatcactggaaccaaagac
tatgaggttgatccaattagatggaagagatttgagcctcatgatattgtgattgaatgt
gccaaaatttcactggattctaaagaggcatcgtctgaagaaggatattcctctctgtca
gatcacataccacggcgtcctgtagaccatagtcgttcatgctcagagctcagcatccat
gaagccacatctgtcacacaaatggccgttgttcgtcagtctctttctctgtcattacct
tatctcactgtaacccaagactcaggttccagcgcacagacccccaatcatcagagtgat
gggatgaactcctcaggaacaaaggaggagatgtggagtccttcctcaatgtgtgggatg
acgacccctcccagctctagaggaatgtcccccaccacagtgtctgacatctcacatagt
gcctcccacctctcaggacggatccccagcatttcaggggatggaaaatggcccctatct
ccctccacgccctcagggtcatctcctctcccatcactctcagaggaaatagggcagcct
gcccaaaacaccagcagtactcaggctaaggtgattcagtcgggcaaagagctgaggaaa
gtcacacctagaagtattaataacaacggaggcgcaagtgatgccaagactccggtatcg
ttggcacagctctctgacattgtcaaaaggacagatggagagagagaagatgataccatc
aatgaggaaattttgagtctgacccatgggaaactggattttggaacaaggccgggcatg
gattcctcattttccggctccttagacaccctcctctcatctcaccccagccatgagcag
aatttagtgtccactcccgacagggttgaattatctgccaaaggaggagagcagcaaacc
tggtttctctggcccgctttcacccccatcgagaacgggaagagcagtaaatgttctctg
tctgacctgacgaaggagtccatgccgtatgagccattgtttgaccttgctctgcccaaa
gtggcatctctgtttttggagaggaagactgcagaggcaatccggagggctgaggaagaa
agcgggcacagagaggagctagaaggggaggatctttctgccacctcccctctggaagtg
ttggaccgtgttattcagcagggccatgaaacccatgagaaagtgctgaagagaactcta
tcctctcaaagtcaatcatcagacacacactctggaggtaaacagcatagcaataaagga
aaaggtgctgtgtcggcagcgtcggatgagctggggatgttacgcagtcagttactgttg
ctgcatagccagcttctgtatgagagacataagagagaacaacatgcacttcgcaaccgc
cgtctgttcggacgtatcgtcaacacaaccgcactggaagagcaaaacaactccatgaaa
acccaactcaagcttcaggacattgaaatccagactgtgcaggtaagcctgaaagaggaa
cagcggcgctccaagcatatacaagaagacagaaatgctcttgtcaaccaactgcagact
caaatccagcagctaaagaaggagaggaatgactactactcaaagatgcaggagctgaag
agtgatttgcaagagaatcagaagaaggttggagaaatggaggcggagctccagaaagcc
aataacaaagtgtgtaatatgggacacatgcttagccagctgtccatcaagctgaataat
agtgaaaacatggagcaacagatggctttcctcaacaagcagctgctacttttgggtgaa
gccaacaagttatgtgtggaggaaatcgaccgcttggggccagaggctagcaaggaactg
aatatgctgcaggcatcttcactgcgtgaggctgagcgtttgaagcagagctctcttcag
cagagtcagagacttgaagctgcccaacagcgcatcacagatctggagacccaactcact
aagaaagagcaagtcatccgagagcaaaagaaactgctggagaatgtcaaaagccagtcc
acggagcagctgcaggcttcagagaacaggtatctggcccagaagcacatcactcaggca
ttacaatctgagctactggagctctatagccagatagagctctatagccagatagagctc
aaaaacctaaacactaaatcaccagcagagcccacttccgagcctagcagtcccaccaac
cagaggccaaatggcaacagcacaggcccatctgctcagtctttatcagccgacccaatg
aaaaaagaggaaggcatgcacgtgtgtgtcaatggtgtaatatctgccgggtctcctcca
acacccacagcactcattaatggcagtcaggaagaagatctttccgccctaacccgttca
tttcccgccctcccctgcaactccccgctggctgttggctcttaccccagtacaggaagc
tttttgggtaagagagccagagagatgttccgaaataaaagcgagagccactacgagggt
gagccaactaccttcacctgcctctctaaggatcttaaggttgagccaatcacagacccc
acagaaaccgtggagtttgaagaggctactgagcaggctgacctgcagcccatggacaga
ccccgggcgtataacattcaccggaggaggcagcaggatctgaggatcatggactacaat
gagacccaccatgagcattga

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