KEGG   Garra rufa (doctor fish): 141334738
Entry
141334738         CDS       T11039                                 
Symbol
zcchc8
Name
(RefSeq) zinc finger CCHC domain-containing protein 8 isoform X1
  KO
K13128  zinc finger CCHC domain-containing protein 8
Organism
grf  Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:grf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:grf03041]
    141334738 (zcchc8)
Spliceosome [BR:grf03041]
 Complex C
  Other components
   Complex C specific factors
    141334738 (zcchc8)
SSDB
Motif
Pfam: PSP KASH_CCD Knl1_RWD_C DivIC Herpes_BLRF2 CCDC113_CCDC96_CC GOLGA2L5 ENTR1 DUF5798 SLU7_N Prefoldin_2 FapA PEX8_helical ZapB_rel TMF_DNA_bd
Other DBs
NCBI-GeneID: 141334738
NCBI-ProteinID: XP_073696058
LinkDB
Position
5:5148340..5158481
AA seq 711 aa
MAAVDFGDSELFEQFEENAPEQVKIPDEADDEESESSDRLKELRQTIEECEETIEKLNAE
NEELKRKLNILSRPAGIKIEDPKIDGPLCQINYGNNIISNQCRKEMEDFIFNLVQNRLHE
HKNDSEGSALNVKPHHSSFVMEESYKVKASSDSKHMKNAFSMIGSVLYFTNFCVDKLGQP
LLNENPQLTDGWEVPKYQQVFGQIIALEGQEVQIKEKRPKPCCFNCCSEDHQLRDCPEPK
DMARINEKRKAFSQNNNQSNQRYHAEEVEERFAKYKPGIMSQDLLDALGITTNTLPPFIY
RMRELGYPPGWLKEAEMENSGLMLYDGSNDEDENNHSQKISYDVSKLVDFPGFNCSAPPS
VRDDFRSFGSIPMQPQHWKQNFAAFLSSNFPTQGCSKRPHESESTPIKTKKRRSNSGNQE
LDMELESDNDTSQTRSDGFQFHPPLPPGSASSSVAPPLPPGTPPSTPPIPKGTPPPTPPT
NYSPSTHARGSTEGEESEDGLTLEELEEQQRLLWAALEKADTTTNSDSEAGASVTPVPSS
PSVVTSLKLDSEEDGEKMEDSSHAFEIKSTPSSPVEPATNVCEDERIDDAASDGQEKHSI
SESVIDLPAEMSDIIVLDEVHEENSNHDATNGTSDPPQISEQEPNAQAVTETEEPPVNKV
AFVPHRSRFAEGIIPFEDTPEFTEVAEATGVYLKIRDLLKGSPRNQAKNKK
NT seq 2136 nt   +upstreamnt  +downstreamnt
atggctgcggtggattttggagatagcgaattattcgagcagtttgaagagaacgcgcca
gagcaggttaaaatcccagatgaagctgatgatgaggagagcgagagttcagatcgactg
aaggagctgcggcagacaatagaagagtgtgaggaaactatagagaagctgaacgcggag
aatgaggaactgaagaggaagctaaacatattaagtcgtcctgcgggaataaaaatagaa
gatcccaaaatcgatgggccgctttgtcaaattaactatggaaacaacatcatttccaat
caatgtcggaaagaaatggaggacttcatcttcaatctcgtccagaacagactacatgag
cataaaaatgattcagaaggctctgctcttaatgtcaagccacatcattcaagtttcgtt
atggaggagagctacaaagtgaaggcttccagtgactccaagcatatgaaaaatgctttc
agtatgatagggagtgttttatacttcaccaacttctgcgttgataaactgggccagccg
ctgctcaatgaaaacccccagctgactgacggatgggaggttcccaaataccagcaggtc
tttggccagatcattgccctcgaaggccaagaggtgcagataaaggagaaaaggccgaaa
ccgtgctgttttaactgctgttctgaggaccatcagctgcgagactgtccagagcccaaa
gatatggctcgtatcaatgaaaagaggaaggcgttttctcagaacaacaaccagagcaac
cagcgctaccatgcagaagaggtcgaggagcgatttgcaaagtacaagccaggaataatg
agtcaagacctccttgatgctcttgggatcactacaaacacacttcctccattcatctat
cgcatgagggagctgggatatccgccaggctggttaaaagaggcagagatggaaaactca
ggcctgatgctctatgatggttcaaacgatgaagatgaaaataaccacagccaaaagata
tcgtatgatgtctcaaagctggttgactttcctggcttcaattgttctgcaccacccagc
gtaagagatgatttcaggtctttcggttctattccaatgcagcctcagcactggaagcaa
aattttgctgcttttttaagcagtaactttccaacgcagggctgcagtaaaaggccacac
gagtctgaatccacacccatcaagacaaagaaacggagatcgaattcagggaaccaggaa
ttggatatggagttggagtcagataacgacacgtctcagactcgatctgatggtttccag
ttccatccaccgcttcctcctggctccgcatcctcctccgtcgctccacctctaccaccg
ggaacgcctccatccactccgccaatccccaaaggaactccgccaccgactccgcctaca
aactattccccgtccactcacgcgagaggatcgactgagggggaggagtctgaggacggg
ctgactctggaggaactggaggagcagcaaaggcttctatgggctgcccttgagaaagca
gatactacaaccaacagcgattctgaagctggagcttctgtgacccccgtcccaagttcc
ccaagcgtcgtcacttcactcaaactagactcggaggaagacggagaaaagatggaggac
tcgagtcatgcatttgaaatcaagagcacgccgtcttcacctgtggaaccagcgactaat
gtctgtgaggatgagaggatagatgacgccgctagtgatggacaggaaaagcattcgatc
agtgagagcgtgatcgatttgccagcagagatgagtgatattatcgttctggatgaagtt
cacgaggaaaacagtaatcatgatgcaaccaatggaacttcagaccctcctcagatcagc
gaacaagagcccaacgctcaagcagttaccgaaacggaggagcctcccgtgaataaagta
gctttcgttcctcatcggagcaggtttgcagagggaataattccttttgaggacacgcct
gagtttacggaggtggccgaagcaactggggtttacctcaagattcgagatttactaaaa
ggctcaccgagaaatcaggccaaaaacaagaaataa

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