Garra rufa (doctor fish): 141334746
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Entry
141334746 CDS
T11039
Symbol
tars1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
141334746 (tars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
grf01007
]
141334746 (tars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
grf03016
]
141334746 (tars1)
Enzymes [BR:
grf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
141334746 (tars1)
Amino acid related enzymes [BR:
grf01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
141334746 (tars1)
Transfer RNA biogenesis [BR:
grf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
141334746 (tars1)
Prokaryotic type
141334746 (tars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
141334746
NCBI-ProteinID:
XP_073696071
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All DBs
Position
5:13464169..13480607
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AA seq
718 aa
AA seq
DB search
MADESVTEQMKDLKMDEKKNGKDAGKKKNKNAGGDAGGRAELNPLPEYIEDRLSIYNKLK
GEHEALLAEKAAKDSKPIKITLPDGKVVDGESWKTTPYQVACGISQGLADNTVISKVNNE
VWDLDRPLEGDCSVVFLKFDDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIENGFYY
DMFLENEGVSSNDFPCLENLCKKIIKEKQPFERLEVKKETLLEMFKYNKFKCRILNEKVT
TPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMESLQRIYGISFPDP
KMLKEWEKFQEEAKNRDHRKLGREQDLFFFHDLSPGSCFFLPKGAYIYNTLIEFIRSEYR
KRGFQEVVTPNIYNSKLWQTSGHWQHYSENMFSFEVEKEIFALKPMNCPGHCLMFDHRPR
SWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSMDQIESEIKGCLDFLRT
VYDVFGFTFKLNLSTRPEKFLGEPEVWDQAEKQLENSLNDFGEKWVLNPGDGAFYGPKID
IQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIIHRAILGSVERMIAILT
ENYGGKWPLWLSPHQVMVVPVGPTCEEYAQRVQKEFHGAGLMTDVDLDPGCTLNKKIRNA
QLAQYNFILVVGEKEKSSDTVNVRTRDNKVHGERSLKDCMERLKELKASRTRNAEEEF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgagagcgttaccgaacaaatgaaggatttgaaaatggacgaaaagaagaat
ggcaaagatgcaggaaagaagaaaaacaagaatgctggtggagatgcaggtggcagggct
gagttgaatcctttgccagagtacattgaggatcgactgtccatttacaacaagctaaag
ggagaacatgaagccctgctggccgagaaagcagctaaagacagcaagcccatcaagatc
acgcttcctgatggaaaagttgtagatggggagtcctggaagaccacaccataccaggtt
gcctgtggcatcagccaaggccttgctgataatactgtgatctccaaagtgaacaatgag
gtatgggatctggacaggcccttagagggagactgcagtgtagtgtttctcaaattcgat
gacgaagaagcacaagcagtttattggcactccagtgcccacataatgggagaggccatg
gagcgagtctatggaggatgcctttgttacgggccgcccattgagaatggcttttactat
gatatgtttcttgaaaacgaaggtgtatcgagtaatgatttcccctgtttggagaacttg
tgtaagaagatcatcaaagagaagcagccctttgagaggctggaggtaaagaaggagact
ctgttggagatgttcaagtacaacaaattcaagtgcaggatcctaaatgaaaaggttacc
actccgacaactacagtctacaggtgtggacctttgatcgatctgtgcagggggcctcat
gtaagacatacaggaaagatcaaggccttgaagatccacaagaattcttctacatactgg
gagggcaaagcagacatggagagcctccagaggatctatggtatctctttccctgatcct
aagatgctgaaagaatgggagaaattccaggaagaagccaagaacagggatcatcgcaaa
ctaggaagagagcaagacttgtttttcttccacgacctgagtccaggtagttgtttcttt
ctgcctaaaggagcctacatctacaacacgctgatcgagtttattaggagtgaatacaga
aagaggggattccaggaagtggtcacaccgaacatctacaacagcaaactatggcaaacc
tcaggacactggcagcactacagcgaaaacatgttctcctttgaggtggagaaggagatc
tttgctctcaagcccatgaactgccctggacattgtctgatgtttgaccaccggccgcgc
tcttggagggaactgcctctgcgtatggctgattttggcgtcttgcaccgtaacgagttg
tctggagctcttactggcctgactagagtcagacgttttcaacaagatgacgcgcacatc
ttctgctctatggaccagatcgagtctgagataaagggttgcctggactttctgcgtaca
gtgtatgatgtgtttggcttcaccttcaaactgaacctttccaccaggccagaaaagttc
ctaggagaacctgaagtgtgggaccaggctgagaagcaactggagaacagcctgaatgat
tttggtgagaagtgggttctgaatcctggtgatggagctttctacggcccaaagattgat
attcagataaaggatgccatcggcagatatcaccaatgtgccaccattcagcttgacttc
cagttgcctattcgcttcaatcttacatttgtgagccatgatggtgatgacaagaagaga
cctgtgatcatccacagagcgatcctgggttcagtggaacgcatgatcgccatccttact
gaaaactatggtggaaagtggccactgtggctttccccacatcaggtgatggtggttcct
gtaggacccacttgtgaggagtacgcccagagagtacaaaaggagttccacggggcaggg
ctgatgacggatgtggatctagacccaggctgcaccctgaacaagaagatcaggaatgca
cagttggctcagtacaatttcattttagtggtgggtgagaaggagaagagcagtgacaca
gtgaacgttaggactcgtgataacaaggtacacggagagaggagtctgaaggactgcatg
gagcgactcaaggagctgaaggcctcaagaacccggaatgcagaggaggagttctga
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