Garra rufa (doctor fish): 141334753
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Entry
141334753 CDS
T11039
Symbol
xbp1
Name
(RefSeq) LOW QUALITY PROTEIN: X-box-binding protein 1
KO
K09027
X box-binding protein 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
141334753 (xbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141334753 (xbp1)
04131 Membrane trafficking [BR:
grf04131
]
141334753 (xbp1)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, Jun
141334753 (xbp1)
Membrane trafficking [BR:
grf04131
]
Autophagy
ER-phagy
ER stress-related proteins
141334753 (xbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_2
bZIP_1
bZIP_Maf
CENP-H
Motif
Other DBs
NCBI-GeneID:
141334753
NCBI-ProteinID:
XP_073696077
LinkDB
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Position
5:46047716..46050231
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AA seq
391 aa
AA seq
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MVVVTAGTGGAHKVLLISGKQSASSGVTQGGYSRSISVMIPSQASSDSDSTISGQPLRKR
QRLTHLSPEEKALRRKLKNRVAAQTARDRKKAKMGELEQQVLELELENQKLHVENRLLLE
KTSDLINENEELRQRLGLDTLEEKEKVQVLESAVSELGLVTGSSERSTQATCASAAGAGP
AVPKSEDFTMDTHSPGPSDSESDLLLGILDILDPELFLKTELQEAQEPQEPLVLVEGAGE
QVPASPPAALGPAPVKLEALNELIHFDHIYTKPAEVVSEESICEVKSEDMVAFSEVDEEI
EVEDQTVSVKDEPEEVVIPAVDQNPDAVDDFLSDASSFGGYEKASCLTDAYSDSGYERSP
SPFSNISSPLCSEGSWDDMFATELFPQLISV
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtagttacagcagggaccggaggagcccacaaagtcctcctaatatcgggaaaa
cagagcgcttcgtccggcgtaacacagggcggatacagccgttccatatctgtcatgata
ccgagccaagcctcttcagactccgactccaccatctctggacaaccactgcgcaaaagg
cagagactcacacatctgagcccagaggaaaaagcacttcgaaggaaactaaagaaccga
gttgctgcacagacagcaagagacagaaaaaaggccaaaatgggggagttggagcagcaa
gtcttggagttggagcttgagaatcagaaacttcacgttgagaacaggctgttgttagag
aagacgagcgatctcatcaatgagaatgaggaactaagacagagactggggttggatacc
ttggaagagaaagaaaaggttcaggtattggagtccgcagtgagcgaattgggtttggtg
accgggtcttctgagcgcagcactcaggctacgtgtgcctccgcagcaggtgcaggccca
gcagtccccaaatctgaagacttcaccatggatactcacagccctggcccttcagactct
gagtctgatctcttgcttggcattctggacatccttgacccagagctcttcctcaagaca
gaactccaagaagcacaggaaccccaggaaccccttgtgctggttgaaggtgcaggagag
caagtacctgcctccccacctgcagctttggggcccgcaccagttaagctggaggccctt
aatgaactgatccactttgaccacatctacaccaaacccgctgaggtggtgagcgaggag
agcatttgcgaagtcaaaagcgaggatatggtcgccttctctgaggttgatgaagaaatc
gaggtggaggaccaaacggtctctgtcaaggacgaaccagaggaagtggtcatccctgcg
gtggatcagaatccagacgcggttgacgatttcctctctgacgcctcttccttcggcggc
tacgagaaggcttcgtgtctgacggatgcgtacagtgactctggatacgagaggtctcct
tcccccttcagcaacatttcatcccctctctgctctgagggctcttgggatgacatgttt
gcgactgaactcttcccccagctgattagtgtctga
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