Garra rufa (doctor fish): 141334851
Help
Entry
141334851 CDS
T11039
Symbol
abca2
Name
(RefSeq) ATP-binding cassette sub-family A member 2
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
grf Garra rufa (doctor fish)
Pathway
grf02010
ABC transporters
grf04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
141334851 (abca2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
141334851 (abca2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
grf02000
]
141334851 (abca2)
Transporters [BR:
grf02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
141334851 (abca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DUF4162
Motif
Other DBs
NCBI-GeneID:
141334851
NCBI-ProteinID:
XP_073696176
LinkDB
All DBs
Position
5:38897217..38950554
Genome browser
AA seq
2522 aa
AA seq
DB search
MCDTSIQFPPAVVIQWVLAFEIFIPLVLFFILLGLRQKKPAIPVKEAFYSAAPLTSAGII
PIMQSLCPDGQRDEFGFLQYKNSTVTQLLERISEVVEQNHLFTSDRPSLGEELESLQQHL
ESLSSAQGPLESHYNTSHGFTVGSVLRNQSTFQQFLIRNLSLPNDAASLLLSSPINLKEV
YNLIFGTYPKVGSKVEEKDEGQNEPHSPGEKLVQLEKQLLGGWRSLEGGLIQKALRDPTK
AAHRQALLKVLSQALGIAGGGGRQKFDPQALREMEGILLTGAVLETLTCGEGGNTGISKI
LLVPEKQQAVLQAYQTTVCGGRAEQRAEVFKEMSEELKDQIDTRRVFDQLRLEQSNMSGL
LDQSHLGALLKNLADVERLLRDVDLLSGLARLLPKGACAGHQPPPIANTSSWGSNTTTWG
PNTTDSPVEEQEGAAGNEAEAENPRSQFSAFVQLWAGLQPILCGNNRFECVTFVNVKYEI
YMFFNHLYCFIRIIEPEALKQGNMSSLGFTSKEQRNLGLLVHLMTTNPKILYSPIGSEVD
KVIQKANETFAFVGNVTHYARVWLNISAELRAFLEEGKLHNHLMWLQQFIADLKKHHELL
NVSDSELMNSLLEENFTLPNTTTLLEQLHTIDNAACGWTNFMSKVSVDIFRGFPDEESIV
NYTLNQAYHDNVSVFASVIFQTNKDGSLPPHVMYKIRQNSSFTEKTNEIRRAYWRPGPNT
GGKFYFLYGFVWIQDMIERAIINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPL
CMVISWVYSVAMMIQHIVAEKEQRLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTA
ILKYGKVLLHSDPFIIWLFLTIYAVATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYM
YVAIREEVAHDKITAFEKCIASLMSTTAFGLGSKYFALYEVAGVGIQWRTINQSPVEGDD
FNLLLSMVMLTIDAIVYGVLTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRIETWDWPW
GGSTRLSVMEEDQACAMEHRRSEETRGIEEEPSHLPLVVCIDKLTKVYKTGSKLALNKLS
LNLHENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTEMERIRQNLGMCPQ
HNVLFDKLSVEEHLWFYSRLKGMAEEDIRKEMDKMIEDLELSNKRHSLVQTLSGGMKRKL
SVAIAFVGGSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTILLSTHHMDEADLLGDRI
AIISHGKLKCCGSPLFLKSTYGDGYKLTLVKKQSDSHTADQSSQSPASSISPCSESRVTQ
FIRQYVASCLLVSDSNTELSYVLPSEAVKKGCFERLFQALEQNLNILALTSFGVMDTTLE
EVFLKVSEEDLSLENSDADMKDSPGGASAGKPSNLLGGPQCEGAPSAAVIRPEVELSNLM
MCSRLSPSQASLQSGSSLGSVRGDEGGLYSDFYGDYCPLFDNGQDHDSASLRDEESSPEL
TIQEGQGSFKLEGWWLKLRQFHGLIVKRFHCAKRNTKGIFSQILLPAFFVCVAMTVALSV
PEIGDLPPLILSPSQYHNYTQPRGNFIPYANEDRLQYRSKLSPDANPQTIVNTLRLPSGV
GATCVLKTPFNSTLDQLAQTLNPYANNSKTLAARYFDSMCLDSFTQGVPLSNFVPPPPSP
APSDDPDAHFEDGLWNYTAAPPTTVREMATSPPTLPLTIREPVRCICSMQGTGFSCPSGV
GGRPPLMKVVTGDILVDITGRNVSEYLLYTSDRLRLHRYGGFTVGNIQKSVPASFGRKTP
PMVRKIAVRRSSQVLYNNKGYHSMPTYLNVLNNAILRANLPSSKGNPAAYGITVTNHPMN
RTSASLSLDYLLQGTDVVIAIFIIVAMSFVPASFVVFLVAEKSTKAKHLQFVSGCDPVTY
WLANYIWDMLNYLVPATCCVLILFVFDLPAYTSPTNFPAVLSLFLLYGWSITPIMYPASF
WFEVPSTAYVFLIVINLFIGITATVATFLLQLFERDKDLKLVNSYLKSCFLIFPNYNLGH
GLMEMAYNEYINEYYAKIGQFDKVKSPFEWDIVTRGLVAMTIEGFVGFLITILCQYNFLR
KAQRVPVNSQPVEDDDVDVACERRRVLRGDADNDMLKIDNLTKVYKSRKMGRILAVDRLC
LGVRPGECFGLLGVNGAGKTTTFKMLTGDESTTGGEAFIQGHSILRELLHVQQSIGYCPQ
FDALFDDLTAREHLELYTRLRGIPWKDEERVVQWALEKLELSKYADKPAGTYSGGNKRKL
STAIALIGYPSLIFLDEPTTGMDPKARRFLWNLILDIIKTGRSVVLTSHSMEECEALCTR
LGIMVNGRFKCLGSIQHLKNRFGDGYMITVRTKTTASVKEVIRFFNRNFPEAILKERHHT
KIQYQLKSENISLAQVFSKMEQVVEVLSIEDYSVSQTTLDNVFVNFAKKQSDNLEQQESS
PSSAGQSPLQRLLSILRPRPANTELNALVSEEPEELESDDDEGLISFEEERVQLSFNTDT
LC
NT seq
7569 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacacttcaatccagttcccaccagctgtagtgattcaatgggttcttgcgttt
gagatattcatccctctggtgctcttcttcatactcctgggcttgaggcagaagaagccg
gccattcctgtgaaagaagccttctacagcgcggcccctctcacctcggcgggcatcatt
cccatcatgcagtctttgtgtccggatggtcagcgggatgagtttggcttcctgcagtat
aaaaactccactgtgactcagttgttagaaaggatcagtgaagtcgtggagcagaatcac
ttgtttacttcagacaggcccagtctgggagaggagctggagtcactgcagcagcacctt
gaaagtctgagctcagcacaaggccctctagagagccactacaacaccagccacggtttt
actgtgggaagtgtcctcaggaaccagtcgacgttccagcagttcctgatcagaaacctt
tccctgccaaacgacgccgccagcctgctgctctcctcccccatcaacctgaaagaggtg
tacaatctcatctttgggacgtatcctaaagtgggatcaaaggtagaagaaaaagatgaa
ggacagaatgaaccccacagtcctggagagaagcttgtacagttggagaagcagttactt
ggaggctggcgtagtttggaggggggtctgattcagaaggcattgagagaccccactaaa
gctgctcaccgtcaagctctgctcaaagtcctgtcccaggcgctcgggattgctggaggt
ggaggaaggcaaaaatttgatcctcaagcattgcgtgagatggagggaattttgttgact
ggtgcagtgcttgaaacactcacttgtggggaaggaggaaacactgggataagcaaaatc
cttttggtccctgagaaacaacaggcagttttacaggcctatcaaacgactgtttgtggt
ggaagggcggagcagagggcagaggtgtttaaggagatgagtgaggaattgaaagatcag
attgatacacggagagtctttgatcagttgcgcctggagcagtctaacatgtctggtctc
ttggatcaatcccatctcggcgctctgctgaagaacctggcggatgtagaacggctcctg
agggatgtggatttgctgtcaggtctggccagattgctccctaaaggggcctgtgctggt
caccagcctcctcctatagccaacacctcctcctggggctccaacacaacaacatggggt
cccaacacaacagacagccctgtggaggaacaagagggagctgcaggaaatgaggccgag
gctgaaaaccctagatcacagttttctgcctttgttcagctctgggcaggtcttcagcca
attctttgtgggaataacaggtttgagtgtgttacctttgtgaatgtgaaatatgaaata
tatatgtttttcaaccatctttattgttttatcaggattattgagccagaagctctgaaa
cagggcaatatgagttctctgggctttaccagcaaagaacaaagaaacttgggattactt
gtccatctcatgactacaaatcccaaaatcctctactctcccattggctcagaggtggac
aaggtcatacaaaaggccaatgagacgtttgcttttgtggggaatgtgactcattatgcc
cgtgtgtggctcaacatctcagctgaattaagagcctttctagaagagggtaaattgcac
aatcacctgatgtggctccagcagttcattgcagacctgaagaagcaccatgagctcttg
aatgtctcagacagtgagctgatgaacagtctgctggaggaaaacttcaccctgccaaac
acaaccactctgttagagcagctgcacaccatcgataatgcagcttgtggttggacaaac
ttcatgtcaaaggtcagtgtggatatcttcagaggcttccctgatgaagagagcattgtc
aattacacactgaatcaggcctaccacgacaatgtctcagtctttgcaagtgtgattttc
cagaccaataaagatggatctctgccacctcatgttatgtataagattcgacaaaactcc
agctttacagagaaaacaaatgaaatccgccgagcttattggcgcccagggccgaacacg
ggtggcaaattttacttcctttacggctttgtgtggatccaagatatgattgagcgggca
atcatcaacacgtttgtgggccatgatgttgttgagcctggaaactatgtgcagatgttt
ccctatccatgctacactagagacgattttctgtttgttatcgagcacatgatgcctctg
tgtatggtcatatcctgggtctactctgtggccatgatgatccagcacatcgtagcagag
aaggagcaaagactgaaagaggtgatgaagatgatgggcttgaataatgcggtgcactgg
gtggcctggtttatcacaggctttgtgcagctttccatctcagtgacggccctcactgcc
atactgaaatacggcaaagtcttgctccacagcgatccctttatcatttggctttttctc
acaatctacgccgtcgccaccatcatgttttgtttcctggtgtcagtgttgtactctaaa
gccaaactggcatcagcatgtggaggaatcatctactttctgagttatgtgccgtacatg
tatgtggccatcagagaagaggtggctcacgataaaatcactgcctttgagaagtgcata
gcgtctttaatgtctaccacagcattcggtctgggatctaagtactttgccctgtatgaa
gttgctggggttggaatccagtggcgcactatcaaccagtcacctgtagagggcgatgac
tttaacctcctgctgtctatggttatgctcaccattgatgccattgtatatggtgtgttg
acctggtatatagaagctgtgcatccaggaatgtatggactgccccggccatggtatttt
cccttgcagaaatcctactggttaggaagtggtcgcatagagacgtgggattggccatgg
ggtggcagcactaggttgagcgtgatggaggaggaccaggcttgtgctatggaacacaga
cgctcagaggaaactcgtggaattgaagaagaacccagtcatttgccactggtggtgtgc
atcgacaaactgaccaaagtctacaagacaggcagcaaactggccctaaacaagctgagc
ctaaacctgcatgagaaccaggttgtctccttcttgggacacaatggggctggcaagacc
accactatgtccatactgacgggactgttcccacccacctctggctctgccaccatatac
ggccatgacatccgcacagagatggagcgcattaggcagaatttgggcatgtgtccccag
cacaatgttttgtttgataagctcagtgtggaggaacatctgtggttctactcgcgtctg
aagggcatggctgaggaagatatccggaaggagatggacaaaatgatagaggatctcgaa
ttgtctaacaagcgtcacagtcttgttcagactctgtctggggggatgaagaggaagttg
tcagtagcaattgcgtttgtaggtgggtcccgggcagtgattttggatgaacccacagca
ggagtggacccgtatgcccgtcgagcaatctgggacctcatccttaaatataaacaaggt
cgcaccatcctgctctccactcaccacatggatgaggctgatttgctgggagaccgtatt
gccatcatctctcatggcaaactcaagtgctgcggttcacccctgttcctcaagagcaca
tatggagatggctacaaactgacacttgtcaagaaacagagtgactcacacactgcagat
cagtcaagccagtctcccgcttcttcaatatctccatgttcagagagcagagtgacacag
ttcatccgtcagtatgttgcctcctgtctgctggtgtccgactccaacactgagctctct
tatgtcctaccgtcagaggctgtcaagaaaggctgttttgagaggctgtttcaggccctt
gagcagaatttgaacatcttggccttgaccagctttggtgtaatggacaccacactggag
gaggtctttctgaaggtatcagaagaagatctgtcactggagaacagcgatgcagatatg
aaggactctcctggcggagcgtcagccgggaagccctctaatctgttaggagggccacaa
tgtgagggtgcaccatccgcagccgtaatccgtccggaggtggagctcagtaacctgatg
atgtgctccaggctgagcccaagccaagcgtctctacagtccggttcttctctgggctca
gtgagaggggatgaagggggcctttattctgacttctatggagactactgcccattattt
gacaatggccaggaccatgactcggccagtctcagagatgaagagtcctctccggagctg
accatacaggagggccagggcagctttaagcttgagggctggtggctgaaactccggcag
tttcatgggctgatagtgaaaaggtttcactgcgccaagaggaacaccaagggcattttc
tcacagatcctgctacctgctttcttcgtctgtgtggcaatgactgtagctctctctgtg
cctgagattggtgaccttcctcccctgattctgtctccatctcagtatcacaattacaca
cagcctcgtggaaacttcattccttatgccaatgaagacaggcttcagtacaggagtaaa
ctttctccagatgccaatccacagacgattgttaacactctgcgtctaccctctggagtt
ggtgcaacgtgtgtactgaaaactcctttcaacagcactctggaccaactggcccaaacc
ctgaatccatatgccaataactccaaaaccttggcagcccgctattttgactctatgtgc
ctggattccttcacacagggtgtgcctttatcaaattttgtgcccccgccaccctctcct
gccccctcagatgacccagatgcgcattttgaagatggcctttggaactacactgccgct
cctcccactactgtccgagagatggcaacgtctccccccacgctgcccttgaccatccgg
gagccggtacgctgtatctgctccatgcagggcactggcttctcctgccccagtggagtc
gggggccgaccgccccttatgaaagtagtaaccggagacatcttggtggacataacaggt
cgcaatgtgtccgaatatctcctgtacacctctgatcgtctcagattacacagatatgga
ggctttactgtaggaaacattcagaaatctgtcccagcatcctttgggagaaaaactcca
cctatggtgcgcaaaatagcagtgaggcgatcctcacaggtgctttacaataacaaaggg
tatcatagtatgcccacttacctaaatgtcctaaacaatgctatcctcagagccaatctg
cccagtagtaaaggaaaccctgctgcatacggcatcacagtgaccaatcatcccatgaac
agaaccagtgccagtctttctttggattatctgctccagggcactgatgtggttattgcc
atcttcatcattgtagccatgtcctttgtgccagcaagctttgtggtcttcctggtagca
gaaaaatctactaaagccaaacacctgcagtttgtcagcggatgtgaccctgtcacttac
tggcttgcaaactacatatgggacatgctgaactacctggttccagcaacgtgctgtgtc
ctaattctgtttgtgtttgaccttcctgcgtacacgtcacctacaaatttcccagcagtg
ctatctctcttcctcctttatggctggtctataactcccattatgtatccagcctctttc
tggtttgaggtgcccagcacagcttatgttttcctcatagtcatcaatctcttcattggc
atcacagccacagtggccactttcctcctacagctgttcgagcgtgacaaggatctgaag
ttggtaaacagctatctgaagtcctgttttctcatctttcccaactataacctgggtcat
ggattgatggagatggcttacaatgagtatatcaatgagtattacgccaagataggccag
tttgataaggtgaagtctccatttgaatgggacattgtgacacggggactggtagcaatg
accattgagggtttcgttggctttctcattacaattctttgccagtacaacttcctcagg
aaagcccagagagtgcctgtcaacagtcagccagttgaggacgatgatgttgatgtggcc
tgtgagagacgcagagtgctgaggggagatgctgacaatgacatgctgaagatcgacaac
ctaaccaaggtgtacaagtctcgcaagatgggccggatcctggcggtggaccgtttgtgt
ttgggtgtccgtcctggcgaatgcttcggactgctgggagtgaatggggcaggaaagacc
accacctttaaaatgttaacaggagatgagagcacaacagggggagaggcctttattcag
ggacacagtatcttgagggagcttttacacgtgcagcagagcatcggttactgccctcag
tttgacgctttatttgatgacctgactgctcgagaacatctggagctgtacacacgcctc
cgcggcatcccctggaaagatgaggagcgggtggttcagtgggctctggagaagttggag
ttgtccaagtatgctgacaaacctgctggcacctacagtggaggcaacaaacgcaaactc
tccacagctattgctctgattggatacccctcacttatctttctggatgagcccaccaca
ggtatggacccaaaggctcgtcgtttcttatggaacctgattcttgacattatcaagact
ggacgttctgtggtgttgacgtcacacagtatggaggagtgtgaagccttgtgcactaga
ctgggcatcatggttaacggcaggtttaagtgcctgggaagcatccaacatctcaaaaac
agatttggagatggatacatgataacagtacgcactaagaccacggctagcgtcaaggaa
gtgatacggtttttcaacaggaattttccagaagccatcctaaaggagcggcaccacaca
aagattcagtaccagctgaagtcagagaacatctctctggctcaggtcttcagcaaaatg
gagcaggtggtcgaggtgctgagcatcgaagattattctgtcagccagacaactctggat
aacgtctttgtcaactttgcaaaaaagcaaagcgataacttagaacagcaagaaagttcc
ccatctagcgctggtcagtcgccactgcagcggctgctcagcatcctcaggcctcgtccc
gctaacacagagctcaatgccctcgtaagtgaagagccagaagaacttgagagtgatgat
gatgaaggactgatcagctttgaagaagagagggtgcagttgtcctttaatacagacact
ctgtgctga
DBGET
integrated database retrieval system
