Garra rufa (doctor fish): 141334853
Help
Entry
141334853 CDS
T11039
Symbol
arap1a
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141334853 (arap1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141334853 (arap1a)
Membrane trafficking [BR:
grf04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
141334853 (arap1a)
Endosome - Golgi transport
Arf GTPase associated proteins
141334853 (arap1a)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
141334853 (arap1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
PH_8
PH_11
PH_3
SOS1_NGEF_PH
RA
PH_6
PH_2
PH_4
DUF4844
Ank_2
Motif
Other DBs
NCBI-GeneID:
141334853
NCBI-ProteinID:
XP_073696178
LinkDB
All DBs
Position
5:39973860..39996246
Genome browser
AA seq
1080 aa
AA seq
DB search
MQKCFINLKAEEDKKETAIWREREDSIDIRCTEFPDFSEDFRQIVKAGWLEKTPPKGGKI
YQRRWVQLDSEYLRYFQSVKEVYSKRMVSLGSVDKVVSIGDLRFELHSQSRTFLFRAEST
QERNDWVCCIEKILSNRRHSLEPRNLFFRNGTVNINLEAHMEMLSPRTKVYTLISKDKLF
LFKSHEEYFQGVGITDIDMRMANVKDGENKRSFTLTTPYRAFSFMADSESEKQRWCEALT
ECVSHALSCDGLCESIWRVPSNRLCADCSSSMPEWASINLCVLLCEKCAGAHRGLGQNVS
KVRSLKLDERVWTDDLIRVFLLLGNGKANQFWGANIPPSESLCSSANSEKRLEHITSKYK
DGKYRKYHALYGQQEALNSALCSAVQSGDLLETLSLLNCGADINCNTGIPQLPTPLSLAK
RSGQTVQAELLMQNLSTESFTRLDKDVSIRSQSGYLFKTASSARPITDHKSKADFTQRWC
SLTDGMFNYFKSEQSHSKCGGMKTSEIICLSVNSPGKHGYEHTFELYSEEGRVYLFGTDD
GSIIKNWIRSIAMAVLPPALFDVCGTCERLGRLRCTEGNHGIGWFCLSGFKLQVLLEDNV
QTIDLRKLLSLNLSDSAGSMVLVWRGGPLHLLADRRPHFAGWQTFIQQRSGAGDQPLSQQ
QLTELGVPVTVDRCLDHITRNGLMSSGIYRKSGINSRVTKLLEKFQNDARSVTLHESEYS
VDDLANTLKRFLREVKDGVFNGQENSDSWLRAAGLEDRSEKVHRYQILLSNLPEVNRETL
KALIYHLVCVQHLSDENQMTVRNLGIVYGPTLFQTDGTDVTGSQVVEELIENYCSIFNVS
ESDLQRQLNMTSDILNKHKSQRPLSRTPSSTICAVYLEKIDEGAEVLVQIAADMTVVKLV
SAVLELKGIQQANEEFWSCYEVLDKEDMERTLHYQERVLPVYFSLSCHSHLLIKRNHDIF
SIMRYLEDIGNLCKSGPMRVCEVKSESSKNFHTRHCELSGTTFRLHKELQGSQCEREYPV
KELKLYHGCRSKLHPPTPWGLTLIYDKQQWYLCCENEDELTEWTATFYSIQYNGDIWPSW
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtgttttatcaacctgaaagctgaagaggataaaaaagagacagcaatttgg
agagaacgtgaggacagtattgatatccgatgtacagagtttcctgatttctcagaggat
ttccgtcagattgttaaagctggctggcttgagaaaactcctccgaaaggtgggaagatt
taccagcgccgatgggtgcagctggattcagaatatttgagatattttcaatcagtcaag
gaagtatactctaaaaggatggtgtctctgggatctgtcgataaggtggtcagcattgga
gacttgagatttgagcttcacagccagagccggactttcctgtttcgagcggaaagcact
caggaaagaaacgactgggtgtgctgtattgaaaagattctgagtaatcgcagacatagt
ctggagccccggaatctgttctttaggaacggaactgtaaatattaatttagaggcccac
atggagatgttgtcgccacgcaccaaagtctacacacttattagcaaggacaaactgttc
ctcttcaagagccatgaggaatattttcagggtgtaggcatcactgatatagacatgcga
atggccaacgtgaaagatggagaaaacaagcgctctttcacactcaccactccgtacaga
gcattcagttttatggcggattcagagagtgagaagcagagatggtgtgaggcacttact
gagtgtgtgagtcatgctctgtcatgtgatgggttgtgtgagagcatttggcgtgtgcca
tcaaaccgtttgtgtgcggactgcagctcttcaatgccggagtgggcttcaatcaacctg
tgtgttctgctgtgtgaaaaatgtgcaggcgcacacagaggtctgggccagaacgtgtca
aaggttcgcagtctgaagctggatgaacgagtgtggactgatgacctcatcagggttttt
ctgctgcttggtaacggcaaagcaaatcagttctggggagcgaatattcccccgagtgag
agtctctgttcgagcgcaaacagcgagaaacgtctggaacacatcacatcaaaatacaaa
gatggaaaatatcgcaaataccacgcactctatggccaacaggaggcactcaacagcgct
ctgtgttcagcggtgcagtctggtgatttgttggagactctctcgctgctgaattgtggg
gcggatatcaactgcaacactggtatcccacagctccctactccactgtctctggccaaa
cgcagtggccaaacagtacaagcagagctgcttatgcagaacttgagcacagagtcgttt
acacgattggataaagatgtgtccattcgatctcagtctggctatctttttaagaccgcc
tcatcagctcggccaatcacagatcacaaatccaaagcagatttcactcagcgttggtgt
tctcttactgatggaatgttcaactactttaagagtgagcagagtcacagtaagtgtggt
ggcatgaagaccagtgaaatcatctgcctgtctgtcaacagcccaggaaaacatgggtat
gaacacacgtttgagttgtactctgaggaggggagagtctacctctttggaactgatgat
ggcagcatcattaagaactggatcaggtctattgccatggctgtgctgcctcctgctctg
tttgatgtgtgtggaacctgtgaacgtttgggtcgcctgcgctgcactgagggcaaccat
ggcattggttggttttgcctgagcggcttcaaactgcaggtgttactggaagacaatgta
caaacaattgacctccgcaagctactctcactcaatctgtcagacagtgctggctccatg
gtacttgtttggagaggtggtcctctgcatttgctggctgaccgcaggcctcattttgcg
ggttggcagacctttattcagcagagatccggtgctggggatcagccactatcacaacag
caactcactgaactgggtgtccctgtgactgttgaccgctgcctggaccatataacgcgt
aacggactcatgtcatcaggaatctaccggaaaagtggcattaattctcgagtgaccaaa
ctgctggagaagtttcaaaatgatgcgcgaagtgtaaccctgcatgagtcagaatattct
gtggatgatttggctaacacgctgaaacgatttctcagggaggtcaaagatggagtgttt
aatggacaagaaaatagcgacagctggcttagagctgcaggtctggaggacagaagtgag
aaggttcatagataccagattcttctttcaaacctcccagaagtcaacagagaaactctt
aaagcactcatataccacctggtttgtgttcagcatctgtcagatgagaatcagatgact
gtacgaaaccttggcatcgtatacggtccaacgctttttcagacagatggaacggatgtc
acaggatctcaagtggtggaggaactgattgaaaactactgcagcatttttaatgtctca
gagtctgaccttcagaggcagctaaacatgacatctgacatcctgaataaacacaagtcc
cagaggcccttaagtcgaactccatccagcaccatttgtgctgtatacctggagaagata
gatgagggtgcagaggtgcttgttcagattgcagcagatatgacagtagtcaagttagtt
tctgcggttttggagcttaaaggaattcagcaggccaatgaagagttttggagctgctat
gaagttctagataaagaagatatggagagaactctgcattaccaggaaagagtgctgcca
gtttatttctctcttagttgtcactctcacctgctgatcaagaggaatcacgatatcttc
agcatcatgaggtacctagaggatatagggaatctgtgtaaaagtggaccaatgcgtgtt
tgtgaggttaaaagtgaaagtagcaaaaacttccacactcgtcactgtgagctttctggc
accacatttaggctgcacaaggaactgcagggttctcagtgtgagagagaatatcctgtc
aaagagctcaagctctatcacggttgccggagcaaactgcatccacccacaccatgggga
ctaacactgatttatgacaagcaacagtggtatctgtgctgtgaaaatgaagatgagttg
actgaatggacagccacgttttacagcatccagtataatggtgacatctggccctcctgg
tga
DBGET
integrated database retrieval system
