Garra rufa (doctor fish): 141334980
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Entry
141334980 CDS
T11039
Symbol
arvcfb
Name
(RefSeq) ARVCF delta catenin family member b isoform X1
KO
K28154
splicing regulator ARVCF
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141334980 (arvcfb)
Spliceosome [BR:
grf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
141334980 (arvcfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT
HEAT_EZ
Cnd1
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
141334980
NCBI-ProteinID:
XP_073696303
LinkDB
All DBs
Position
5:37617685..37949598
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AA seq
1009 aa
AA seq
DB search
MEEYDVPSAASILASVKEQEARFERLTRALEEERRNVSLQLERGSLPSDRLVGGTTGGSN
QPLAWQQMVLQEQSPSNQTSLAMMQEPQEVVEETVTIEEDPGTPTSHVSVVTSDDGTTRR
TETKDNVTNMKVTKMVKTVTTRTVRQVPLGPDGLPLPEGSSPLGSYTDSIDRRYMKNGER
FITPQATSTLTRSYNNYSDSYNDTPDSQFRHYALHDGYGDVADNYGSLSRGVNYRPYRPY
MPTGGYRPENSYTLPIRKDDYGHVAQPQVPMGSSTVDLNRSQPERFQPEPYGLEDDRRSL
GPDEEEPYDLEPDYSTANRRTLPGRTIREPLRNGPRVRGYEDPIEAELIDERHPYIHGMY
PAPLAQPERGSLASLDRMGGRRSPSIDSIRKDPRWRDPDLPEVIAMLGHPIDPVKSNAAA
YLQHLCYENDKIKKDVRQLKGIPVLVGLLDHPKAEVHRKACGALRNISYGKDHDNKVAIK
SCDGIPALIRLLRKTNDMEVRELITGTLWNLSSYEPLKMVIINHGLQTMTNEVIIPHSGW
EHEPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARRRLRECEGLVDALLHALQSAVGK
KDMDNKSVENCVCIMRNLSYHVHKEVPGAEKFQDPSTLQGPGSAGTQRKKKDDAGCFGGK
KAKEEWFNQAYQICLEQNEGRKNGEHDKNYDTLDLPKRTEPTKGFELLYQPEVVRLYLSL
LTESQNFNTLEAAAGALQNLSAGQWTWSNYIRATVRKEKGLPILVELLRSDSDKVVRAVA
IALRNLSIDRRNKDLIGSYAMRDLVSNLPSGQQRPAKNLEEDTVVAILNTIHEIITDSSE
NARSLITAQAIDKLVAINRTSQSARETKAASHVLQTVWSYKDLRNALTKDGWNKTHFQPI
ATGTPKGSKSCKPGYDDTTLPLMEKNQGNRGCSGGDMIPMDELGPDGYSTIDQRDKDSKY
KSSDGSSDLQEREPLKNDTNRKHYIRSNRPTVSLVDACDVKPQPVDSWV
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatatgacgtgccgtcagccgccagtatcctggcatcagtcaaagagcaggag
gctcgcttcgagcgtctgaccagagcccttgaagaggaacgccgcaatgtctccttgcag
ctggaacgcggcagtctgccctctgatcgactggtgggcggcaccacaggcgggagcaac
caaccgctggcctggcaacagatggtcttgcaggagcagagccccagtaaccagacatca
ctggccatgatgcaggagccccaggaggttgtggaggagactgtaaccatagaagaagac
cccggcacacccacctcgcatgtttctgtggttacctcagacgatgggactacacgccgc
acagagactaaggacaatgtgactaatatgaaggtcactaaaatggtcaagacagtaaca
acacgaacagttcgacaggtgccactgggtcccgacggccttcctcttccagaaggctca
tctccgctgggaagctacactgactccattgatcggcgctacatgaagaacggcgaacgc
ttcatcacaccccaggctacttccaccctcacacgctcgtacaacaattacagcgactcc
tacaatgacactccagacagtcagtttcgccactacgcacttcacgatggatacggagac
gtggccgacaactacggaagtctgtctcgcggagtcaattacaggccctatcggccctac
atgcccaccggtggataccgaccggagaacagctacactctccccatccgcaaggatgac
tatgggcatgtggcccagcctcaagtcccaatgggaagtagcactgtggatctcaatcgt
tctcagcctgagcgcttccaacccgaaccctacggactggaagacgaccgccgcagtctc
ggcccagatgaagaagagccgtacgacttagagcctgattattccacggctaaccgccgc
acgctgcctggacgtaccattcgagagccattgcgcaacggcccccgcgtgagaggctat
gaggaccctatcgaggctgaattaatcgatgaaagacacccctacatccatggcatgtac
ccagcacctcttgcccaacccgagaggggcagcttggccagtctagaccgcatgggtgga
cgtcgctctccttcgattgacagcattcgcaaagacccgcgctggagggaccccgacctg
cctgaggtcatcgccatgctaggtcatcccatcgatccggtcaaatctaatgcagctgcc
tacttgcagcatctctgctatgaaaatgacaagataaaaaaggatgttaggcagctgaag
gggatcccagtgctggtgggtttgctggaccaccctaaagcagaagtccatcgcaaggct
tgtggagctttgagaaacatctcctacggcaaggaccacgataacaaggtggccatcaag
agctgtgatgggattccagctctcatccgtctgctgaggaaaaccaatgacatggaagtt
cgggaacttatcacaggaacactttggaacttgtcctcctatgagccactgaagatggtg
ataattaaccacgggcttcagacgatgactaatgaggtcattatccctcattcgggctgg
gaacacgagccaaacgaagactcgaagccaagagatgcagagtggaccaccgtcttcaag
aacacatcaggatgtctaaggaatgtgagctcggacggtgcagaggcgcgcagacggttg
agagagtgtgaggggctggtggatgccttgctgcatgcgctgcagtctgctgtgggaaag
aaggacatggacaacaaatctgtggagaattgtgtttgcatcatgaggaacctgtcttac
cacgtacacaaggaggttccaggggctgagaagttccaggacccctcaactcttcagggc
cctggctctgctggcactcagaggaagaagaaagatgacgcaggctgctttggaggaaag
aaggccaaagaggaatggtttaatcaagcatatcaaatatgtttggaacaaaatgaaggg
aggaaaaacggcgagcatgacaaaaactatgacacgttggacctacccaagcgcacagaa
cccactaaaggttttgagttactgtatcagccggaggtggtccgactctacctgtccctg
cttacagaaagccagaacttcaacacgctagaagctgcggccggagctctacagaacctc
agcgctggacagtggacatggtcgaactatatccgggcgacagtgcgtaaggagaaaggg
ctgccaatcctcgtcgagctcctgcgctcagactcagacaaggtggtgcgagctgtggcc
atcgctctgaggaacctgtccatcgaccgccgcaacaaagacctaatagggagttatgcc
atgagggatttggtcagcaacttgcccagcggacagcagcggccagccaagaacctggag
gaggacacagtggtggccatcctcaacaccatccatgaaatcatcactgacagctctgag
aacgcccgctctctcattactgctcaagcaatcgacaaactagtggccatcaacaggacc
agccagtcagcaagggagaccaaagctgcttcccatgtactacagacggtttggagctat
aaggatctgagaaacgccctgaccaaggatggatggaataaaacacacttccagccgata
gcaactggcactcccaaaggatccaagagttgcaagcctggctatgacgataccacactc
cccttgatggagaagaaccaaggcaacagagggtgtagcggcggggatatgatacctatg
gacgaactcggtccagatggctactcaacgattgaccagagagacaaagactccaagtac
aaaagcagcgacggctcatcggatctgcaggagcgggagccgttaaagaatgacacaaat
aggaaacactatatcaggagcaacaggccaactgtcagtctggtggatgcttgtgatgtt
aaacctcagcctgttgactcttgggtctaa
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