Garra rufa (doctor fish): 141335001
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Entry
141335001 CDS
T11039
Symbol
sox19a
Name
(RefSeq) transcription factor Sox-19a
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141335001 (sox19a)
Transcription factors [BR:
grf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
141335001 (sox19a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
141335001
NCBI-ProteinID:
XP_073696354
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All DBs
Position
5:39749183..39751415
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AA seq
298 aa
AA seq
DB search
MYSMLEHDMKSAVPPTHQSAQGMTQLNGGVTHGTAKPAVNNQQQQQSSDPMDKVKRPMNA
FMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRALHMKEYPD
YKYKPRRKTKPVLKKDNPAAKYPLSAGNLLAAAAAQGSGGSPRMDSYGWGHTGGYTGMQT
DALGYSQQLHRYDLSALQYPSAMATAQTYMNGANSYNPMSYSSTPQQPSPVMSMVKPDQV
SHSPTGAHSHQRGPLQGDLRDMISMYIPGGDTTDSGAQRGYSNIQQHYLTGTAPLTHI
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgctggaacacgacatgaaatccgccgtgccaccgacgcaccagagcgcg
cagggaatgacccagctgaacggtggagtgactcacggaaccgccaaaccggctgtcaac
aaccagcaacaacaacagagtagcgatcctatggacaaagttaagaggcccatgaacgcg
tttatggtctggtcccggggccagaggcgcaaaatggcacaggagaatcccaaaatgcac
aactctgaaatcagcaagcgcctgggcgccgagtggaagctgctgacggacgcggagaaa
cggccgtttatagacgaggccaagcgacttcgcgctcttcacatgaaggaatatccagat
tataaatacaaaccccgtcgtaagacaaaaccagtgctgaagaaggacaaccccgctgct
aagtatcccctctcagccggcaacttactggcggcagccgcggctcaaggatcaggtgga
agtccgcggatggatagctacggctggggtcacacaggtggctacactggcatgcagacg
gatgctctgggttacagtcagcagctgcaccgctatgatctgtccgccctccagtatccc
tccgccatggccaccgcacagacgtacatgaatggtgcaaactcctacaaccccatgtcc
tacagcagcactccacagcagcccagcccagtcatgtccatggtgaaaccagaccaggtg
tctcactctcccaccggagcccacagccaccagcggggtcctttacaaggagacctgagg
gacatgattagcatgtacatccctggtggagacaccacagacagtggagcacagagaggc
tattccaacatccaacagcattacctcaccggtacagcacctctcactcacatctga
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