Garra rufa (doctor fish): 141335064
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Entry
141335064 CDS
T11039
Symbol
tbc1d8b
Name
(RefSeq) TBC1 domain family member 8B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141335064 (tbc1d8b)
Membrane trafficking [BR:
grf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
141335064 (tbc1d8b)
Endosome - Golgi transport
Rab GTPases and associated proteins
141335064 (tbc1d8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
141335064
NCBI-ProteinID:
XP_073696452
LinkDB
All DBs
Position
5:40197481..40220566
Genome browser
AA seq
1150 aa
AA seq
DB search
MWLKPEEVLLKNALKLWVTEKSNDYFVLQRRRGYGEDSGGLTGLLVGTLDTVLDSTAKVA
PFRILHQTPDSQVYWSVACGASLEEISQHWDWLQQNIIRTLSVFDSGEDITSFVQGKIRG
LIAEEGTSTSDEEDPERFREAVLRFERLFGLPQREKLVTYFSCSYWRGRVPNQGWIYLST
NFLCFYSYMLGNEVKLVYPWDEVSRLERTSSVLLAESIRVCVRGEDHFFSMLLRLQQTYL
IMQQLADYAIVRFFDKETFNAEHPLANPLHITQRALETHARNQSFRAFFRLPQEENLCEV
YESFLWVPFSHVNTLGKICVSENYLCFASQDGSQCHLIIPLWEVFSVELPDRSSRALTVC
LRGKRALRFSEVRDFERLAATIRRKCGTAGSPQHYVSNPDEEGVMVGQSQAVSTEALMNV
FHPHDAENLDPKMLKERMKEQSWQIHFAEYGRGTGMFCTKKTRDLIVRGVPETLRGELWM
LFSGAVHDMISHPGYYGRLLEECMGSSSLACDEIERDLHRSLPEHPAFQSDTGISALRRV
LTAYAHRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVAVCERMLPDYFNRRIIGALVDQ
AVFEELIRVHLTQLTEHMTDLSFFSSVSLSWFLTLFISVLPIESAVNVVDCFFYDGIKAI
LQLGLAVLDYNMDNLLCCHDDAEAVTVLNRFFDNVTNKDSPLPATVQQASATANDKSIQK
VDISDLIKEAYEKYGDIRTEEVENMRKRNKLYVIQTLEDTTKQNVLRVVAQDVKFSAAQL
DELYMLFKRQHFVSCYWLVSSPALQNHDPSLPYLDQYQLDQSQFSSLFNLLQPWTTHTHS
RSLARSAFRLLDENGDGLVNFKEFILGLDILYNRSFTEKLKFLFKLHLQPGTQECKILPP
SRFFPPAEDQSFSTRLSDSAEDGVIRKCPERGRAKVDLQEYLKQWQEDLQRREENIKDLP
RINQVQFIGLTKTLYGVFHGNEEEESLYRAVARVTSLLLRMEEVGRKLQESSPQKTPQST
PTSTAQPETSPTQPTSPETKALAEGESNQPESPVSQHETAPSHSDITPTSTSRPSTPTSS
PTGTSSPMLDTPTDTPSSPSTIRDGDWSFSFEQILASLLNEPSVVRFFERAIETDSLIAR
ARKNQLKDVH
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcaaacccgaagaggtgcttctcaaaaacgcgctgaaattatgggtaacggag
aaatccaacgattacttcgtgctgcagcgcagacgcggatacggagaggacagcggcgga
ttgacaggcctgctggttggaactttggacacagttcttgactccacagccaaggtcgcc
ccgtttcgcattttacaccagacgcccgactctcaggtgtactggagcgttgcctgtgga
gcatctttagaggagatctcacagcactgggactggctgcagcagaacatcatcagaacg
ctctctgtgtttgattctggtgaagacatcaccagttttgtccagggaaagataaggggt
ctgatagcagaggaaggcacatcaaccagtgatgaggaggatcccgaacgcttccgggag
gcagtgctgcgctttgagcggctgttcggtttgcctcagagagagaagcttgtgacgtat
ttctcttgcagctactggagaggacgagtgccaaatcagggctggatctacctcagcacc
aacttcctgtgtttctactcctacatgctgggaaatgaggtaaaactggtgtatccctgg
gatgaggtgagccgtctggaacgtacatccagtgtgttgttggcagagagcatccgtgtg
tgtgtgcgtggagaagatcatttcttctcgatgctcttgaggctccagcagacatacctg
atcatgcagcaactggctgactatgccattgtgcgtttttttgacaaagagacatttaat
gctgaacatccactggccaaccctcttcacatcacacagagggcgctggaaacacatgca
cggaatcagtcatttcgagcatttttccggttgccgcaggaggagaacctttgtgaagtg
tatgagagtttcctctgggttccattcagccacgtcaatacgcttggaaaaatctgtgtc
tccgagaactatctgtgctttgcgagccaggatgggtctcagtgccatctgataatccct
ctatgggaggtgtttagcgtggagctgccagatcgcagtagtcgtgcccttactgtgtgt
cttcgtggcaagagagctttgcgtttttctgaggttcgggattttgagcgacttgctgcc
actattcgaagaaaatgtgggacagcaggaagcccccagcattacgtcagtaatccggat
gaggagggtgttatggtggggcaaagtcaagctgtcagcactgaagctcttatgaacgtc
tttcatccgcatgatgcagaaaacctcgaccccaaaatgctgaaggagcgaatgaaggaa
caatcatggcagatccattttgctgaatatggccgtggaactggaatgttctgcaccaaa
aaaacacgcgatctcattgtacgaggagttccagagactctcagaggggaactgtggatg
ctgttctcaggtgcagtacatgacatgatctctcatcctgggtactacgggcggttattg
gaggagtgtatgggcagcagctcacttgcgtgtgatgagattgagagagatctgcatcgc
tcccttccagaacatcctgcatttcagagcgacacaggaatctcagctcttcgacgcgtc
ttgactgcctacgctcatcgcaaccccaaaatcggctactgccaggcaatgaatatcctg
acgtctgtgttgctgctgtatgctaaagaggaagaggccttctggctgctggtcgctgtg
tgcgaaagaatgctaccagactacttcaaccgcagaattattggagccctggtggaccag
gctgtgttcgaggaactgatccgtgtgcatctaacccagctgaccgaacacatgacagat
ctgtcgttcttctcgtcagtgtcgttgtcatggttcctgactctcttcatcagtgtgctg
ccaatagagagcgctgtgaatgttgtcgactgcttcttttatgatggaatcaaagccatc
ctgcagcttggccttgctgtcctcgactacaatatggacaatctgctttgttgccatgac
gacgcagaagctgttacagtcctcaacaggttttttgacaatgtcacaaataaagacagt
cccttgccagctaccgtacagcaggcatctgcaacagccaatgacaaatcaatacaaaag
gttgacatcagcgatctcatcaaagaggcatatgagaaatatggagacattcgaacagag
gaagttgaaaacatgcggaagaggaacaagctttatgtcattcagacactagaagacaca
accaaacaaaatgtattgcgcgttgttgctcaagatgtgaagtttagtgctgctcagctg
gatgagctctacatgcttttcaagaggcagcattttgtgagctgttactggttagtatct
agtcctgccctgcagaaccatgaccccagcctgccatatctggaccagtaccagctggat
caatcccagtttagtagcctttttaacctcctgcagccgtggaccacacacacgcactcg
cgctcgctggcacgatcagccttccggcttctggacgagaacggagacggacttgtgaac
ttcaaagaattcatattgggtcttgatatcctgtacaacagatcattcacagaaaaactc
aaatttctcttcaaactgcaccttcaaccagggacccaggagtgtaagattttaccgccg
tctagattttttcctccggctgaagatcagtctttctccactcgtctttctgactctgca
gaagatggagtgatcagaaaatgtccagagagaggtcgtgctaaagtagatctgcaggaa
tatctgaaacagtggcaggaagacttgcagcggagagaagagaatattaaagatctgccc
agaattaatcaggtgcagtttattggtttgacaaagactctctacggtgtgttccacggt
aatgaggaggaggagagtctataccgcgctgtggcaagagtgaccagtcttctcttgcgc
atggaagaggtggggcgaaagctacaggagagcagcccgcagaaaacgcctcaaagtaca
cccaccagcacagctcagcctgagacctccccaacacaacccaccagccctgaaaccaaa
gccctcgctgagggtgaaagcaaccaacctgagtctccagtcagtcaacacgaaaccgcc
ccatcccattctgacattaccccgacctcaacctcacgcccttccacgcccaccagcagt
cccaccggaaccagcagccccatgttggacacgccaacagacacccccagctcgccctca
accatcagagatggagactggagtttctccttcgagcaaattctcgcatctctcctgaat
gaaccgtctgtcgttcgcttcttcgaacgggccattgaaacggattctctgattgcacgg
gcacgtaaaaaccagcttaaagacgtacactaa
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