Garra rufa (doctor fish): 141335067
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Entry
141335067 CDS
T11039
Symbol
wdr36
Name
(RefSeq) WD repeat-containing protein 36
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
grf Garra rufa (doctor fish)
Pathway
grf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
141335067 (wdr36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
grf03009
]
141335067 (wdr36)
Ribosome biogenesis [BR:
grf03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
141335067 (wdr36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_Vps41
NBCH_WD40
Beta-prop_HPS5
Utp12
Beta-prop_LRRK2
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
141335067
NCBI-ProteinID:
XP_073696456
LinkDB
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Position
5:25082317..25103089
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AA seq
893 aa
AA seq
DB search
MSAGKKGSVIFSGFRALGLYSNHLAHVLRFHKKHREFYVITSVGQCFHTFNVKKLGIVAV
SNALPEDISSLAADRMLVYAAYGKLISAFAKNKEVVHTYTGHQADVHLLLPFGDHLVSVD
KDNVVIIWDVESEDTYLQISYDKASFEVSALMHPSTYLNKILFGSSQGSLQLWNVKSNKL
LFTFPGWASAVTVLQQTPAVDVVGVGLASGQIIIHNIKFDETLMKFQQDWGPVTALSFRT
DGHPIMASGSPIGHIGLWDLEEKKLVSQMRDAHSTAIAGLTFLQSEPLLITNAADNSIRV
WIFDVAGGEGRLLRQRNGHSAPPTKVQHHDKSGLNILSAGQDGTLQSFSTVHERFNKSLG
HGTLNKAKAKKKAVMYDTAKLPAITTFASETARQSDWDGIIACHRGFLVTTSWNYQKGSI
GAHKLEPERFNKNRGLNVHATAVDITSCGNFAVIALSSGHIDVYNMQSGFHRGQYGQDKA
HAGPVRGVSVDALNQLTVSVGADRLLKIWRFKSKELLHTHSLPAAPASSQLHRESGMLAI
ALDDFTIHILDMETRRTVRRFSGHRGQINDMTFSPDGRWLITASMDCTIRTWDLPSGSLV
DCFLVEAAAVSLSMSPTGNFLASSHVDGLGIYLWSNNTLCSLVSLRPLPADYEPAVIMLP
GSCPSKDTEEEEISDSESSEMAEYISPAQLDEHLVTLSLLPDSRWKNLLHLDIIKKKNKP
KEPPKLPKAAPFFIPTIPGLVPQFALPSTPSEEKSKVVNLGVLAQKSTFYLQLENASDNN
SYEEPIKLLRELGPSAIETELRSLSPDMGGDVRVMQSFLKLISSILQSKRDFDLAQAYLA
LFLKLHLRFIADQPELMEEAQSVSAHLEETWMSMQTLLNQNICLLSYIKSALL
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgggaaagaaaggaagcgtgatcttctctggattcagggcgctgggactttac
tctaatcatctggcacacgtgcttcgcttccataagaaacacagagagttctatgtgatc
acttcagtcggacagtgtttccacacgttcaatgtgaagaaacttggaatcgttgcagtc
agtaatgccctcccagaagacatttcatccctggcagcagatcgtatgcttgtctatgcc
gcatatggaaaacttatctctgcttttgcaaaaaacaaagaggttgttcacacatacaca
ggccatcaagctgatgtgcacttgctgttgcctttcggagatcatctggtttctgttgac
aaggacaatgttgtcattatttgggatgtggagtctgaagacacataccttcagatttca
tatgacaaagcatcatttgaagtctctgctttgatgcatccgagcacctacctgaacaaa
atcctgtttggaagcagtcaagggagtcttcagttatggaacgtcaaatcaaacaaactc
ctgttcactttccctggctgggcatctgctgttactgttcttcagcagactccggctgta
gatgttgtgggtgtgggtttagcgtctgggcagattatcattcacaatatcaaatttgat
gaaacactgatgaagttccagcaagactggggtccagtcacagctttatcctttaggaca
gatggacatccaataatggcatctggcagtcctatcggacacataggactgtgggattta
gaagagaagaaactagtcagtcaaatgcgggatgctcattcaacagccatcgctggcctc
acgtttcttcaaagcgaacctctcctgatcaccaacgcagcagacaattccatacgggtt
tggatttttgatgttgccggaggagaaggacgtctgctaagacagcgaaatggtcacagt
gccccaccaacaaaggttcaacaccacgacaagagcggcttaaacattcttagtgcaggt
caagatggtactttgcagtcattttcaactgttcatgaaagattcaacaagagtttgggg
cacggcaccctcaacaaagcaaaggctaaaaagaaagcagtgatgtatgacacagcaaaa
cttccagccatcacaacttttgcctcagaaactgctcgtcagagtgactgggatggcatt
attgcatgccaccgcggttttcttgtgactacgtcatggaactaccagaaaggttcgatt
ggtgctcacaagctggagcctgaacgctttaacaagaaccgtggcctcaatgtccatgca
actgctgttgatatcacatcctgcggaaactttgcagtgattgcactgtcttcgggacac
attgacgtgtacaacatgcagtctggttttcatcgagggcagtatggacaagacaaggca
catgcagggcctgtgcgcggcgtctctgtggatgcgctgaaccagttgacagttagtgtg
ggagcagatcggcttctgaaaatatggaggttcaaatccaaggagctgttacatacacac
agcctgccagctgccccggcgtcatctcagcttcacagggaaagcggaatgctcgccatc
gccctggatgattttaccattcatattctggacatggagacaaggaggactgtccgcaga
ttctctggacaccgtgggcagatcaacgacatgacatttagtccagatggacgctggctg
attacagcatctatggactgcaccatcagaacatgggatcttccatctggcagtttggtt
gactgtttcctggtagaagcggcagccgtcagtctcagtatgtcccctaccgggaacttc
ctggcctcgtcgcacgttgatggcctaggtatttacttatggtccaataacacactgtgc
agtttggtatcattgcgccctctacctgcagactatgagccggctgtgatcatgctgcca
ggcagctgcccaagcaaagatactgaagaggaagaaatttcagattctgaaagctctgag
atggctgagtacatttcaccagcacagctggatgaacatctggtcacactctctctgctt
cctgactcacgctggaagaacctgctgcatctggacatcatcaagaaaaagaataaaccc
aaagaacctccaaaactacccaaagctgcacccttcttcattcccaccattccagggctg
gtgccccagtttgctctacccagcacaccttcagaggaaaagtctaaagttgtcaacttg
ggagtgttggcacagaagtccaccttttaccttcagcttgagaatgcttcagacaacaac
tcatatgaagagccaataaagctgttgagagagttgggcccttctgccattgaaacagaa
cttcgaagcctgtcaccagatatgggtggagatgtcagagttatgcagagcttcctcaag
ctgatcagcagcattcttcagtccaaaagagatttcgacctggctcaagcctacctagca
ttgttccttaagctccatcttcggttcatcgcagaccagcccgagctgatggaggaggca
cagagtgtctcggcacacctggaggagacatggatgtccatgcagacgctcctaaatcag
aacatttgtctgttgtcttatatcaagagtgcactactgtaa
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