KEGG   Garra rufa (doctor fish): 141335067
Entry
141335067         CDS       T11039                                 
Symbol
wdr36
Name
(RefSeq) WD repeat-containing protein 36
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
grf  Garra rufa (doctor fish)
Pathway
grf03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    141335067 (wdr36)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:grf03009]
    141335067 (wdr36)
Ribosome biogenesis [BR:grf03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    141335067 (wdr36)
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_VPS8 WD40_RFWD3 Beta-prop_Vps41 NBCH_WD40 Beta-prop_HPS5 Utp12 Beta-prop_LRRK2 Cytochrom_D1
Other DBs
NCBI-GeneID: 141335067
NCBI-ProteinID: XP_073696456
LinkDB
Position
5:25082317..25103089
AA seq 893 aa
MSAGKKGSVIFSGFRALGLYSNHLAHVLRFHKKHREFYVITSVGQCFHTFNVKKLGIVAV
SNALPEDISSLAADRMLVYAAYGKLISAFAKNKEVVHTYTGHQADVHLLLPFGDHLVSVD
KDNVVIIWDVESEDTYLQISYDKASFEVSALMHPSTYLNKILFGSSQGSLQLWNVKSNKL
LFTFPGWASAVTVLQQTPAVDVVGVGLASGQIIIHNIKFDETLMKFQQDWGPVTALSFRT
DGHPIMASGSPIGHIGLWDLEEKKLVSQMRDAHSTAIAGLTFLQSEPLLITNAADNSIRV
WIFDVAGGEGRLLRQRNGHSAPPTKVQHHDKSGLNILSAGQDGTLQSFSTVHERFNKSLG
HGTLNKAKAKKKAVMYDTAKLPAITTFASETARQSDWDGIIACHRGFLVTTSWNYQKGSI
GAHKLEPERFNKNRGLNVHATAVDITSCGNFAVIALSSGHIDVYNMQSGFHRGQYGQDKA
HAGPVRGVSVDALNQLTVSVGADRLLKIWRFKSKELLHTHSLPAAPASSQLHRESGMLAI
ALDDFTIHILDMETRRTVRRFSGHRGQINDMTFSPDGRWLITASMDCTIRTWDLPSGSLV
DCFLVEAAAVSLSMSPTGNFLASSHVDGLGIYLWSNNTLCSLVSLRPLPADYEPAVIMLP
GSCPSKDTEEEEISDSESSEMAEYISPAQLDEHLVTLSLLPDSRWKNLLHLDIIKKKNKP
KEPPKLPKAAPFFIPTIPGLVPQFALPSTPSEEKSKVVNLGVLAQKSTFYLQLENASDNN
SYEEPIKLLRELGPSAIETELRSLSPDMGGDVRVMQSFLKLISSILQSKRDFDLAQAYLA
LFLKLHLRFIADQPELMEEAQSVSAHLEETWMSMQTLLNQNICLLSYIKSALL
NT seq 2682 nt   +upstreamnt  +downstreamnt
atgtcggcgggaaagaaaggaagcgtgatcttctctggattcagggcgctgggactttac
tctaatcatctggcacacgtgcttcgcttccataagaaacacagagagttctatgtgatc
acttcagtcggacagtgtttccacacgttcaatgtgaagaaacttggaatcgttgcagtc
agtaatgccctcccagaagacatttcatccctggcagcagatcgtatgcttgtctatgcc
gcatatggaaaacttatctctgcttttgcaaaaaacaaagaggttgttcacacatacaca
ggccatcaagctgatgtgcacttgctgttgcctttcggagatcatctggtttctgttgac
aaggacaatgttgtcattatttgggatgtggagtctgaagacacataccttcagatttca
tatgacaaagcatcatttgaagtctctgctttgatgcatccgagcacctacctgaacaaa
atcctgtttggaagcagtcaagggagtcttcagttatggaacgtcaaatcaaacaaactc
ctgttcactttccctggctgggcatctgctgttactgttcttcagcagactccggctgta
gatgttgtgggtgtgggtttagcgtctgggcagattatcattcacaatatcaaatttgat
gaaacactgatgaagttccagcaagactggggtccagtcacagctttatcctttaggaca
gatggacatccaataatggcatctggcagtcctatcggacacataggactgtgggattta
gaagagaagaaactagtcagtcaaatgcgggatgctcattcaacagccatcgctggcctc
acgtttcttcaaagcgaacctctcctgatcaccaacgcagcagacaattccatacgggtt
tggatttttgatgttgccggaggagaaggacgtctgctaagacagcgaaatggtcacagt
gccccaccaacaaaggttcaacaccacgacaagagcggcttaaacattcttagtgcaggt
caagatggtactttgcagtcattttcaactgttcatgaaagattcaacaagagtttgggg
cacggcaccctcaacaaagcaaaggctaaaaagaaagcagtgatgtatgacacagcaaaa
cttccagccatcacaacttttgcctcagaaactgctcgtcagagtgactgggatggcatt
attgcatgccaccgcggttttcttgtgactacgtcatggaactaccagaaaggttcgatt
ggtgctcacaagctggagcctgaacgctttaacaagaaccgtggcctcaatgtccatgca
actgctgttgatatcacatcctgcggaaactttgcagtgattgcactgtcttcgggacac
attgacgtgtacaacatgcagtctggttttcatcgagggcagtatggacaagacaaggca
catgcagggcctgtgcgcggcgtctctgtggatgcgctgaaccagttgacagttagtgtg
ggagcagatcggcttctgaaaatatggaggttcaaatccaaggagctgttacatacacac
agcctgccagctgccccggcgtcatctcagcttcacagggaaagcggaatgctcgccatc
gccctggatgattttaccattcatattctggacatggagacaaggaggactgtccgcaga
ttctctggacaccgtgggcagatcaacgacatgacatttagtccagatggacgctggctg
attacagcatctatggactgcaccatcagaacatgggatcttccatctggcagtttggtt
gactgtttcctggtagaagcggcagccgtcagtctcagtatgtcccctaccgggaacttc
ctggcctcgtcgcacgttgatggcctaggtatttacttatggtccaataacacactgtgc
agtttggtatcattgcgccctctacctgcagactatgagccggctgtgatcatgctgcca
ggcagctgcccaagcaaagatactgaagaggaagaaatttcagattctgaaagctctgag
atggctgagtacatttcaccagcacagctggatgaacatctggtcacactctctctgctt
cctgactcacgctggaagaacctgctgcatctggacatcatcaagaaaaagaataaaccc
aaagaacctccaaaactacccaaagctgcacccttcttcattcccaccattccagggctg
gtgccccagtttgctctacccagcacaccttcagaggaaaagtctaaagttgtcaacttg
ggagtgttggcacagaagtccaccttttaccttcagcttgagaatgcttcagacaacaac
tcatatgaagagccaataaagctgttgagagagttgggcccttctgccattgaaacagaa
cttcgaagcctgtcaccagatatgggtggagatgtcagagttatgcagagcttcctcaag
ctgatcagcagcattcttcagtccaaaagagatttcgacctggctcaagcctacctagca
ttgttccttaagctccatcttcggttcatcgcagaccagcccgagctgatggaggaggca
cagagtgtctcggcacacctggaggagacatggatgtccatgcagacgctcctaaatcag
aacatttgtctgttgtcttatatcaagagtgcactactgtaa

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