Garra rufa (doctor fish): 141335068
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Entry
141335068 CDS
T11039
Symbol
srek1
Name
(RefSeq) splicing regulatory glutamine/lysine-rich protein 1 isoform X1
KO
K13165
splicing regulatory glutamine/lysine-rich protein 1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141335068 (srek1)
Spliceosome [BR:
grf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
141335068 (srek1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
141335068
NCBI-ProteinID:
XP_073696458
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Position
5:25427899..25459292
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AA seq
514 aa
AA seq
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MSGMPGTNVIQITNLSSAVSSDQMRTLFGFLGDIEELRLYPPDNAPLSFSSKVCYIKYRE
PSSVGVAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAAPVTSLMSGGGLLPIPS
PATLQNRGLPLANLGVLKSSLDTTAAALNAIASQPPLMGNVDPSKVDEIRRTVYVGNLNS
QSTTAEQLLKFFKQVGDVKFVRMAGDETQPTRFAFVEFADQESVARALTFNGVMFGDRPL
KINHSNNAIVKPPELTPQAAAKELEDVMKKVREAQSTIAAAIEPEVKNHSSSGSRRSRRS
KSHSRSPSHSRRKRSRSKHRGRLSQRSRQKVNDSRGSHRRRSHSKERKHSRSRSHSRDRR
KDKDNKVRKDDDWEEKRPREKKGKMSPKGYSGSRRSRSISRVHKKRSRSRSRSPRQRARS
PSPSKRGKKDKKRDKGRDSSRERTESSLSRRKSRDYEHKAKPSLMERGYEQADHEYDSDM
DGSGSVGSGRSPQAYLNGSYGSTYAEEDDLSAAE
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggatgcccgggacgaacgtgattcaaatcactaatttgtcgtcggcggtgagc
agtgatcagatgagaactctgttcggcttcctaggggacatcgaggagctgcgactgtac
cctcctgacaatgcacctctttccttttcatccaaagtttgttacataaagtatcgagag
ccttccagtgttggtgtggcacaacatttaaccaacactgtttttattgacagagctttg
attgttgtgccctgcgctgaaggaaaaatccctgaagaggcaaaggcgctttcgcttttg
gcccccgctgcgccagtgaccagcctgatgagcggaggaggacttctgcccattcccagc
cccgctacactacagaatcgaggtcttcctttagctaatctgggggtcctgaagtctagt
ttggacacaactgcggcagcactaaatgcaattgcttcacagcctccactcatggggaac
gtagatccctctaaagttgatgagatcaggaggacggtgtatgtcggcaatttgaattca
cagagcaccacagcagagcagctcctcaagttcttcaagcaggtgggagatgttaagttt
gttagaatggcaggagatgaaacacagcctacacgttttgcttttgtggagtttgctgat
caggaatcagtggcaagagcacttacatttaatggagtcatgtttggtgacagaccacta
aagattaaccactccaataatgccatagtgaagcctccagagctcacacctcaagctgcg
gccaaagagctggaagatgtgatgaagaaagttagagaggctcagtcaaccatcgctgct
gctatcgagccagaggttaaaaatcattcatccagtggatctagacgttccagaaggtcc
aaatctcactctcgctccccatcacactcacgaagaaagcgatctagatcaaagcacagg
ggacgcctgtcccagagatcacggcagaaggtgaacgactcccgtgggtcacataggaga
cgctcgcattccaaagaaaggaaacacagccgcagtcgatctcattctagggaccgaagg
aaggacaaggacaacaaagtaaggaaggacgatgactgggaagaaaagaggccacgggaa
aaaaagggaaagatgtctcctaaaggctacagtggctctagacgttcccgcagcataagc
agagtccataagaaaagaagcagatctcgatccaggtcaccaaggcagagagccaggtca
ccatcaccttctaaaagaggcaagaaagataaaaagagggataaaggacgggacagcagc
agggaaaggacagagagctcactgtccaggaggaaaagcagggattatgaacataaagct
aaaccatcactgatggagaggggctatgagcaggcagaccacgaatatgacagtgacatg
gatgggtcaggctctgtgggtagtggcagatctccccaagcttatctcaacggcagctac
gggagcacttacgccgaggaggatgatctctctgcagctgagtga
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