Garra rufa (doctor fish): 141335077
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Entry
141335077 CDS
T11039
Symbol
cpt1a2b
Name
(RefSeq) carnitine O-palmitoyltransferase 1, liver isoform
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00071
Fatty acid degradation
grf01212
Fatty acid metabolism
grf03320
PPAR signaling pathway
grf04148
Efferocytosis
grf04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
141335077 (cpt1a2b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
141335077 (cpt1a2b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
141335077 (cpt1a2b)
03320 PPAR signaling pathway
141335077 (cpt1a2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
grf03029
]
141335077 (cpt1a2b)
Enzymes [BR:
grf01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
141335077 (cpt1a2b)
Mitochondrial biogenesis [BR:
grf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
141335077 (cpt1a2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
Motif
Other DBs
NCBI-GeneID:
141335077
NCBI-ProteinID:
XP_073696478
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Position
1:39751546..39786722
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AA seq
780 aa
AA seq
DB search
MAEAHQAVAFQFTISPEGIDLHLSYQALNQIYLSGLRSWKKRISRIKNRIIKGVYPASPS
SWLFVVIAILANMYMQSDPSMGLIAKIQEHLPLSLSLSTQCQTVLSVLLFSTLLWLSLIL
ALRFCLKLLLSYHRWMFELHGHMSTKTKVWATLVRLLSSRKPLLYSYQTSLPHLPVPPIK
YTLERYLESVKPLHDMAGFQRMTKLAAEFEKSLGNRLQRYLKLKALWATNYVSDWWEEYV
YLRSRGPIMVNSNYYGMDFLYVTPTASQAARAGNTITALFLYRRKVNREELNPSRIPGTV
IPLCAAQCERMFNTTRTPGEETDVLQHWQDSEFVAVYHRGRYFRLRVYQAGRLLSPREIQ
YQIQRILDDPSPPSPGEDKLGALTAGDRKPWAQMRKQFFSSGVNKRSLDCIEKAAFFITL
DDQEEGMMGEDPAVNLDRYAKSLLHGKCYDRWFDKSFSVVVYKNGKNGLNAEHSWADAPI
VAHLWEFTLATDTFHLGYTTDGNCKGEIEHSLPPPQRLSWDIPPEVQTQVLESLAVAQAL
ADDVDCHVFPFREFGKGRIKKMKMSPDSFVQLALQLAYYRDRGTFCLTYEASMTRLFREG
RTETVRSCSNESCAFVLALEAGEDREHCNKLFRKAAEKHQNLYRLAMTGSGIDRHLFCLY
VVSKYLGVESPFLKEVLSEPWRLSTSQTPVQQMELFDLVNHPEFISLGGGFGPVADDGYG
VSYIIMGEEMINFHVSCKHSFTETDSHKFGSQISQAMMDLMFLLNPDFKETTKANPEKRS
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggctcatcaggcagtagcgtttcagttcactatcagtcctgagggcatcgac
ctgcatctgtcctaccaagccctcaatcaaatctacctctctggcctgcgatcctggaag
aaacgtatcagcaggattaagaacagaatcattaaaggtgtatacccagctagcccctcc
tcttggctttttgttgtaatagcaatcttggccaatatgtacatgcagtccgatccatca
atgggcctcattgctaagattcaagagcacttgcccctcagtctatcattgagtactcaa
tgtcagactgtgctgtcagtgctgctgttcagtactctgctgtggttgtctctcattctg
gctctgaggttctgcctaaagcttctcctatcataccaccgatggatgtttgagctacat
ggacacatgtctaccaagaccaaagtctgggcgaccctagttaggttgctttccagcaga
aagccattactgtacagctatcagacatctttaccacacctgcctgtacctcccattaaa
tacacactggaaagatatcttgagtcagtaaagccactgcatgatatggctggttttcag
cgaatgacgaaactggctgctgagtttgagaaaagtctgggcaaccgcctccaaagatac
ctcaaactcaaagcactctgggccacaaactatgttagtgactggtgggaagagtatgtt
tatctccgcagccggggtcccataatggtcaacagtaactattatggcatggacttcctg
tacgtgacacctacggctagtcaggcagctcgtgctggaaatactatcacagccctcttc
ctgtatcgacgcaaagtcaaccgagaggagcttaatcctagtcgtattcctggtacagtc
ataccgctgtgtgcagctcagtgtgaacgcatgttcaacaccacacgcacgcctggagag
gagactgatgtgctgcagcattggcaggacagtgagtttgtcgctgtgtaccacaggggc
cggtatttcaggttaagggtataccaagcaggacgcttgctgtcacccagagaaatacag
taccagattcaaaggatcttggatgacccctcacctccttctccaggagaggacaaacta
ggagcgctgacagcaggagacaggaaaccctgggctcagatgagaaagcagttctttagc
tctggagttaataagcgctcactggactgcattgagaaagcggcgttcttcatcacgcta
gacgatcaggaagaaggcatgatgggggaagatcccgccgtgaacttggaccgctatgcc
aaatccctccttcacggaaaatgctatgacaggtggtttgataagtcgttttccgtagtg
gtgtataagaatggaaagaatggcttgaatgcagaacattcttgggccgacgctcctata
gtggcccacttgtgggagttcactttggccacggacacatttcatttgggttacaccacg
gatggaaactgcaagggagagatcgagcactctttaccacctcctcagcgcttgagctgg
gacataccgccagaggttcagacgcaggtgttggagtcacttgctgttgcacaagcacta
gctgatgatgtggactgtcatgtgttccccttcagagagtttgggaaagggcgcatcaaa
aaaatgaaaatgagcccagattcctttgtgcagctggccctgcagctggcctactacagg
gatagggggactttctgtctgacgtatgaagcctccatgactcgtttgtttcgcgagggt
cgcactgagaccgtacgatcctgctccaatgaaagctgtgcttttgtcctcgcactggaa
gcaggagaggacagggaacattgcaataagctgttccgaaaggctgctgagaagcatcag
aacctctaccgcctggccatgactggatctggcattgacaggcacctcttctgcctatat
gtggtctcaaaatacctgggggtagagtctcctttccttaaagaggtgttgtcagaaccc
tggcgcctctccacctctcagacgcctgtgcagcagatggagttgtttgatttggtcaac
catcctgagttcatctcactgggaggtggctttggtccggtggctgatgatggctacggt
gtatcttacatcattatgggcgaggaaatgatcaacttccatgtgtcctgcaagcactcc
ttcacagagactgactctcataagtttggctctcagatcagtcaagccatgatggatctt
atgtttctgctgaaccccgacttcaaggaaaccacaaaagccaaccctgagaaaaggtca
taa
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