Garra rufa (doctor fish): 141335099
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Entry
141335099 CDS
T11039
Symbol
ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
grf Garra rufa (doctor fish)
Brite
Enzymes [BR:
grf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141335099 (ddx54)
Ribosome biogenesis [BR:
grf03009
]
Eukaryotic type
Pre-60S particles
Helicases
141335099 (ddx54)
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GFIT
Other DBs
NCBI-GeneID:
141335099
NCBI-ProteinID:
XP_073696506
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Position
5:9436239..9449746
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AA seq
857 aa
AA seq
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MAQRKKKLTKRKKSSAHRDHELQSDDEEFEVAAGIKDDHDTPSRRLPRFPASSECVSDVE
LDTRELVRAQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDGKDVVA
MARTGSGKTAAFLVPMFEKLKAPQAQTGARALVLTPTRELALQTMKFTRELGKFTGLKTA
LILGGDSMYEQFTALHENPDIIIGTPGRLMHVIKEMNLKLQSVEYVVFDEADRLFEMGFA
EQLQEIIRRLPDTRQTLLFSATLPKMIVEFARAGLTEPVLIRLDVDTKLSDQLKLSFFHL
RLDDKPALLLHLLRNVVKPQEQTVVFVATKHHVEYLKELLTVEGIECAYIYSALDQTARK
INIGRFVHRKAMVLLVTDVAARGIDIPLLDNVINFNFPSKAKLFLHRVGRVARAGRGGTA
FSLVCPDEVPYLYDLHLFLGRPIQLALPEHKQDADGVFGRVPQSILDDEESQLVTAHESS
LDLQNLQRISENAYKQYLKSRPNPSAESIKRAKNTDLSSMAVHPLLGSGLEPMELDRLLI
VDSIKGYKAKSTIFEINSNNKTSASEVMRAKRSRDDRLVDKYSKARAERIIESAIPTITR
SELKDNEVEQEDDELQTVFSEVVGGKRRNQDNEMDRPKSKKNRESVKDEEFYIPYRPKDF
NSERGLSLGGDGDGGAFEQQASSAVLDLMGDEGNTLNQHKNQMKWDRKRKRFVHDTGKED
KNKKIKTESGQVVHGNKKKKSFYEDWKKKYKIDDRASDSDGETGGAVRGRSFGGRRGRGQ
GRAQSQPAQQQSGSRVRSELKNRDQILKQRKRKSKQQFLQSGGMKKLRAKGRQRLQQVMK
SGFGRGGFKKGKMRKKL
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaggaagaagaagctgacaaagaggaagaagagctcggcacacagagatcac
gagctccagtctgacgatgaagagtttgaagtagctgcaggaatcaaagatgatcatgac
acacccagcagaagacttcctcgattcccggcctcgtccgagtgtgtttctgatgtggag
ctcgacaccagagagctcgtccgagcccagaacaagaagaagaagaagtctggaggcttt
cagtccatgggtctgagttatccagtgtttaaaggcgtcatgaagaagggctataaagtt
cccacacccatccagaggaagactatcccggtgattctggacgggaaggatgtggtggcc
atggctcggacaggcagcggtaaaacagctgccttcctagtcccaatgtttgagaagctg
aaggctccgcaggcgcagacaggcgcccgggctctagtcctcacacccacccgagagctc
gccctgcaaaccatgaagttcaccagagagcttgggaagttcactggcctgaaaactgca
cttattcttggtggagacagcatgtacgaacagttcactgctcttcacgagaatccggac
atcatcatcggtactcctggccgtctgatgcatgtcatcaaagagatgaacctgaagctg
cagtccgtggagtatgtggtattcgatgaagctgacaggctgtttgaaatgggttttgca
gagcagctccaggaaatcatcagacgtcttccagacacacggcagactctgctgttctcc
gccacacttcccaaaatgattgtggagttcgccagagctggcctcacagagccggttctc
attcgtctggatgtggatacgaaactgagtgaccagctgaagctttcatttttccatctg
cggttggatgataaaccagccctactgctacatctgctgagaaacgtggtgaaaccgcag
gaacagactgtggtgtttgtagccaccaaacatcatgtggagtatctcaaagagctcttg
accgtcgagggcattgagtgcgcctacatctacagcgctctggaccagacggctcgcaag
atcaacatcggccgcttcgtccaccgcaaggccatggtgctgctggtcacagatgtggca
gcccgtggtattgacatccctcttctggacaacgtcatcaacttcaactttccatcgaag
gccaaactcttcctgcacagagtcggtcgtgtggctcgcgccggcagaggaggaactgcc
ttcagtctggtgtgtcccgatgaagtgccttacctctatgaccttcatctgttcttgggt
cgacctattcaactcgccctccccgaacacaaacaagacgctgatggtgtgtttggccgc
gttcctcagagcatcctggacgatgaagagtctcagctggtgacggctcacgagagctct
ctggatctccagaatctccagcgcatctcagagaatgcatataagcagtacctgaagtct
cggccaaacccttcggcagagtccatcaaacgcgccaagaacactgacctctcctcgatg
gctgttcaccctctattgggttccggactagagccgatggagctggaccggctgctgatt
gtggactccatcaagggatacaaggctaaatctactatttttgaaatcaactccaacaac
aaaacgagcgccagtgaggtgatgcgagccaagcgctcacgagatgatcgcttggtagac
aagtattctaaagcgcgagcggaacggataattgagtccgcaattcccaccataaccagg
agcgaactcaaagacaatgaggtcgagcaggaggacgacgagcttcagactgtgttctca
gaggtggttggtgggaaaagaagaaatcaagataatgaaatggacagaccgaagagcaaa
aagaacagagaatctgtaaaagatgaggagttttacatcccgtacagacccaaagacttc
aactcagagcgcgggctcagtctaggcggtgatggtgacggtggcgctttcgagcagcag
gcctcttctgcagttctggacttgatgggagatgagggcaacactttaaaccagcacaag
aaccagatgaaatgggatcgcaagaggaaacgcttcgtccatgacacgggcaaagaggac
aaaaataagaaaatcaaaaccgaaagtggacaggtggtccatggcaacaagaagaagaaa
agcttttatgaagactggaagaagaagtataagatcgatgacagagcatcagactcggat
ggagaaactggaggagcggtcagagggaggagctttggcggtcgtagaggcagaggacaa
ggaagagctcagtcgcagccggcccagcagcagagcggctcacgtgtgcgttctgagttg
aaaaaccgtgaccagatcctcaagcagcgcaagcggaaatccaaacagcagtttctgcag
agcggcggcatgaagaaactccgtgccaaaggaagacagcggctgcagcaagtaatgaaa
tctggttttggtcgtggcggcttcaagaaaggaaagatgaggaagaaactttaa
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