KEGG   Garra rufa (doctor fish): 141335113
Entry
141335113         CDS       T11039                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
  KO
K12842  U2-associated protein SR140
Organism
grf  Garra rufa (doctor fish)
Pathway
grf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141335113
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:grf03041]
    141335113
Spliceosome [BR:grf03041]
 Complex A
  U2 snRNP components
   U2 related factors
    141335113
 Complex B
    141335113
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 RRM_7 SET_assoc
Other DBs
NCBI-GeneID: 141335113
NCBI-ProteinID: XP_073696526
LinkDB
Position
5:complement(28118594..28138314)
AA seq 874 aa
MADKKGKSVSVKRTLTKREQEEMKKKEEEKAAEVFEEFIASFDTNEKSGVKTFVRGGIVN
ATKEEEAAEVKKSKLYRPASKFTSPPQNASPVQSAEVKKAAVKKKAEEKKKSNLELFKEE
LKQIQEEREERYKRKKGDSGGVYPDLDLPLTRRSIFDDDPAVPNTTNLYIGCINPKMTEE
MLCKEFGKYGPLASVKIMWPRTEEERTRVTNRGFVAFMTRKDAERALAALDGKTIMGFEM
KLGWGKAVRIPPQPLYTPIGVLKTTAPPPPSGLPFNAQPRDRFRNDFTKPRSRSQEDFYK
TLSEAVVTVVIPPERNLLGLIHRMIEFVVREGPMFEAIIMSREKNNPEFRFLFDNKSQEH
VYYRWKLYSILQGENPNKWRTSPFRMFRGGSLWKPPLLNPYLHGDEEPEESSFPSQEEEP
KKGHLKAEHRERLEALLRGLAPRKDEIGDAMLFCLERAEAAEEVVSCITESLSIAHTPLQ
KKIARLYLISDILYNSCAKVANASYYRKFFETKLPQIFGDISEAYRNIQARLQAEQFKQR
VMGCFRAWEDWAVYPDSFLIQLQNIFLGLIKPGEEVIERAEPKSPDLDGVPLDGISLERG
EIDGTPLDDLDGSPLNWDPSSIDGVPVDDIDGVPLGNSIDDIDGVPFDEGSDKTLPTVAL
SKWEKVEDSESSAKNDSDTEVNLSGLKENDGDSDMSSDEADSPSRYEGAEFKSSLKNFEL
SESKRTRLRELEVKVMNFQDELESGKRPRKSSMNLQQQVQHYRNRLLQKEFDKDDQEKRD
KYSQKQKDRSKKDERRDKGEDRSKTRDKEKSRKSEDRERSRGRSRDKDERRERTRSRSPR
KSKRSRSPSPQHKSWRSSSRSPHRSHKKTKKSKH
NT seq 2625 nt   +upstreamnt  +downstreamnt
atggcagacaaaaaagggaaatctgtgtcggtgaagagaacactaacaaaaagagaacaa
gaggaaatgaagaaaaaggaggaggagaaagctgctgaagtctttgaggaatttatagct
tcttttgacactaatgaaaaaagtggagtgaagacgtttgttcgtggaggcattgtaaat
gcaactaaagaggaagaagccgccgaggtgaagaagagcaaactctacagacccgcctct
aaattcacttctccacctcagaatgcctcacctgtccaatctgcagaagttaaaaaagct
gccgttaaaaagaaagcggaggagaagaagaagagtaacctggagctttttaaggaggaa
ttaaaacaaatacaagaggaaagagaggagcgatacaaaaggaagaaaggtgactctgga
ggagtatacccagatctagatttacctctgacacgaagatcaatatttgatgatgatcct
gcagtgccaaacacaacaaacctgtacatcggctgcatcaaccccaagatgacagaggag
atgctctgtaaggagtttgggaagtacgggcctctggcaagtgtgaagatcatgtggcct
cgcactgaagaagagagaacaagagtcaccaaccgaggttttgttgcttttatgacacga
aaggatgcagagcgtgctttggccgcactggatggtaaaacaataatgggttttgaaatg
aagctaggttgggggaaggcagtacgtattcccccgcaacctctgtacacccccatcggg
gtgctgaagaccactgccccccctccaccctctggactgccattcaacgcccaacccaga
gaccgcttcagaaatgacttcaccaaaccccgcagccgctcacaggaagacttttacaag
actctgtccgaggccgtagtgacagtggtaatccccccagaaaggaacctgctgggcttg
atacacagaatgattgagtttgtggtgagagagggacccatgtttgaggccatcatcatg
agccgagaaaagaacaaccctgaattcaggtttttgtttgataataagagtcaggagcat
gtgtactacagatggaaactctactccattctacagggtgagaacccaaataaatggaga
acgtcacctttcagaatgtttcggggcggctctctgtggaagccacctctccttaacccg
tatctccatggtgatgaagaaccagaagagagctccttcccttctcaagaggaagagcca
aagaaagggcacctgaaggcagagcacagagagaggttggaggccttgctgagagggctg
gctcctcgcaaggatgagattggtgatgcaatgctattttgcctggagagagcagaggct
gccgaggaggtcgtctcctgcatcactgaatctctgtctatagcacacacaccgctgcag
aagaagatcgccagactttacctgatatcagacatcctctacaattcctgtgccaaagtt
gccaatgcgtcttattaccgcaaattttttgaaacaaagctgccgcagatatttggagac
atcagcgaagcgtatcggaacatccaggcccgactccaggcagagcagtttaagcaaaga
gtcatgggatgttttcgcgcgtgggaagactgggcagtttatccagactccttcctgatc
caactgcagaatatattcctggggcttattaaacctggagaggaagtcattgagagagca
gagcccaaatctcctgatctggatggggtaccattggatggtatttctctagagagaggt
gaaattgatggtacaccccttgatgaccttgatggatcacctttgaactgggatccatcg
tctatagatggtgtaccggttgacgacatagacggtgtacctctaggaaactcaatagac
gatattgatggtgtaccatttgatgaaggctcagataagactttacccactgttgcactg
tctaaatgggagaaggtggaggattcagaatcctcagccaagaatgactcagacactgag
gtgaatttaagtggcctgaaggaaaacgatggtgactctgatatgagcagtgatgaagct
gacagccccagcaggtatgagggggcggagtttaagagctctctcaaaaactttgaactg
tctgaaagcaaaaggacacgcctccgagaactggaggtgaaggtgatgaatttccaggat
gagttggagtcgggtaagagaccgaggaagtccagtatgaatctccaacagcaagttcaa
cactacagaaacagacttctacagaaggagtttgacaaggacgaccaggaaaagagagac
aaatattcacaaaaacagaaagaccggtctaaaaaagacgaacggagagataaaggcgag
gacaggagtaaaacaagggacaaagaaaaaagtagaaagagtgaggacagagaaagaagt
agaggacggagtcgagacaaagacgagaggagagaaagaacacgatcccgatcaccacgc
aagtcaaaacgctctcgatcgccatcaccacagcacaaatcgtggaggtcatcgtcccga
tcaccacatcgctcgcacaaaaagactaagaagagcaaacactga

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