Garra rufa (doctor fish): 141335356
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Entry
141335356 CDS
T11039
Symbol
b4galt4
Name
(RefSeq) beta-1,4-galactosyltransferase 4
KO
K07969
beta-1,4-galactosyltransferase 4 [EC:
2.4.1.90
2.4.1.275
2.4.1.-]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00533
Glycosaminoglycan biosynthesis - keratan sulfate
grf00601
Glycosphingolipid biosynthesis - lacto and neolacto series
grf01100
Metabolic pathways
Module
grf_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
141335356 (b4galt4)
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
141335356 (b4galt4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
grf01003
]
141335356 (b4galt4)
Enzymes [BR:
grf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.90 N-acetyllactosamine synthase
141335356 (b4galt4)
2.4.1.275 neolactotriaosylceramide beta-1,4-galactosyltransferase
141335356 (b4galt4)
Glycosyltransferases [BR:
grf01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
141335356 (b4galt4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
141335356
NCBI-ProteinID:
XP_073696885
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All DBs
Position
5:4706690..4722073
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AA seq
349 aa
AA seq
DB search
MGLFPSVFKIIRKGKCLFLLLLCLCVVAWIATFTNDDTDKAVQDGFNFPDDKKVAGFEQM
EMESEMMQSIEEQAVKESCPEQSPLLRGAIKLSFDPSLTIGQVESENGEVVEGQYNPSDC
TARQSVAILIPHRNREKHLLYLLHHLHPFLQRQQLHYAIYVIHQAGDATFNRAKLLNVGY
LEALNDQSWDCFIFHDVDLVPENDHNFYMCGEQPKHLVVGRNSTGYKLRYKGYFGGVSAM
TKEQFFKVNGFPNSYWGWGGEDDDLRIRVTLQKMSIIRPSPEVARYTMVFHKRDSGNQVN
KDRMRLLRRTHQAWKTDGLNTCSYKVLSVQRAPLYINVTVDIGRPERDH
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgggcctctttccatccgtgttcaagatcattaggaaggggaagtgtctgtttcttctg
ctgctgtgtctttgcgttgtagcgtggatcgcaacattcacaaatgatgacacagataag
gctgtccaggatgggttcaattttcctgatgataagaaagtggctgggtttgaacagatg
gagatggaatcagagatgatgcagagcatcgaggagcaggctgtcaaagagagctgtcca
gagcagtcacccctgcttcgaggcgctatcaagctgtcatttgatccctcgctgacgata
gggcaggtagagagcgaaaacggggaggtggtggagggtcagtacaacccctctgactgt
acggccagacaaagtgtggccatcctgatccctcaccgaaacagagagaagcacctgctc
tacctcttacaccaccttcaccccttcttacagagacagcagcttcactacgccatctat
gtcattcaccaggctggagatgccacatttaacagagcaaagttattaaatgttggctac
ctcgaggctctgaacgaccagagctgggactgtttcatcttccatgatgttgatctagtt
cctgagaacgatcataatttttacatgtgtggggaacagcccaagcacttagtagtgggg
aggaattccacggggtacaaactcagatacaaaggttacttcggcggagtttcggccatg
accaaggagcagttcttcaaggtcaatggcttcccaaactcctactggggctggggtgga
gaggacgatgacctgagaattagggtgacgctgcagaaaatgtcaataatccgcccatct
ccggaagtggcgcgatacaccatggtctttcacaaaagggacagcggcaatcaagtcaat
aaagacaggatgcgtctgttacggcgcactcatcaggcgtggaaaactgatggtttgaac
acctgttcctacaaagttctgtctgtccaaagagccccactctacattaacgtcaccgtg
gacattggccggccggagcgagatcattga
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