Garra rufa (doctor fish): 141335358
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Entry
141335358 CDS
T11039
Symbol
clip1a
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
141335358 (clip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141335358 (clip1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141335358 (clip1a)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
141335358 (clip1a)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
141335358 (clip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
FliJ
Motif
Other DBs
NCBI-GeneID:
141335358
NCBI-ProteinID:
XP_073696889
LinkDB
All DBs
Position
5:5199969..5475477
Genome browser
AA seq
1568 aa
AA seq
DB search
MSTSKPSGIKAPSKIGRSTNAGVTKTSPSAGAAKQAQGDKSSAESQDAGEQFKVGDRVWV
NGNKPGVVQFLGETQFAPGQWAGIVLDEAIGKNDGSVSGVRYFQCEALKGIFTRPSKLSR
TEGEADGTTTAPPSRAASPTPSTTSTVSASNKKPASPTKTTAPASELVRSKSESVSNLSE
SGSVKKGERELKINDRVLVAGSKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTR
YFHCQPKYGLFAPVHKVTRIGFPSTTPAKAKTTVRKTSTTPSGLKRSPSASSISSMSSVA
SSASCKPSRTGLLTETSTRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATS
HVGEVEQELSSLREGQEQYVMEVDAKMDQLRVLVEAADREKVELLNQLEEEKRKVEDLQF
RVEEACITKGDLETQTQLEHALLKELEQSLLFEKTKADKLQRELEDSRVATVSEKSRILE
LERDLALRVKEVAALRKSMEAVPGQDGVLDSSLAVLQEELSTLRTQLAAQSHSHQTELSS
LREMLATREQEHSESLSQLQSSSGRISKENEQLLAQLSKSKEENSNIVEEWRSKLASIEA
SHQQALEELKSSHEASRSELVEARNALEQLKLTHKLELEELANKQASEAMAWTGEAKEHK
AQLQKVSEENERLVETLRTNLEKAEEQHLVEMEEVLGKLHSAELRVKELEDTGVKIGQQL
QEKAQEALEQKTALQTLQSQHSQGNQEMERLLTQIQEAKSQARSQEEKVTELSSVLEVKQ
QELSGLLQEKSSLEQELSVLKQNLEKISNDQAKSAQSNQELREELRNKEEQCTSLSAELQ
DVKSQSAGLQRNLKAHEERMQLLTKDKAKLENDIMDMTKSSGDSSTLITKLNEDTKQKER
RLEELQKQLEEEREKAAQAEEKHSLAQAKTEKEAKSLEQKHQAELSELQEKITLLEKSAE
DNQAKAKDMLAVGEKAVADAVEHHSKEMQELQDKFDKVQQELRSSQDQSLELKKQIDELK
TFEEKAKVSETAEQAAQASLETLTQENQQLLTDKSEAEDLVKQLKNSVQEMQSKLDTLKQ
QNTKYEENLNSDSQKISSLTKDIEELKQAAAEKDQTVEDLKNEKEKLTVELSSSHKDSDI
LLNLKKECDSLNDQLKEVKTRESTLKRETEKEKAALQQSLQTQSALVSEKDKDLDSLRNE
LDTLKQQNTQYEENLSSDSQKISRLTKDIEELKQAAAEKDQTVEALKNEKEKLTVELANS
HKDSDILLNLKKECDNLNDQLKEVKMRESTLTSESEKEKAALQQSLQTQSALISEKDKEL
DSLRNELKKECDSLNSQLKKMKMRESTLTKETGKEKEALQQSLQTQSALISEKDKELDSL
RKEIAGLRDSTQTLQSNLKSHRSENTVLQERLKNLERSLADAQIGSTGDDGSDDSALNTW
KEAKENAERQVQFLNSVIVDLQRKNDELKSKLEKMAEAALNGNGAAETDTHNSHTEPEMK
KKPPPRLFCDICDCFDLHDTEDCPTQDQMLDSPPHTAYHGSPNDQRPYCDICEVFGHWTE
SCNDDQTF
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatcaaaacccagtggaatcaaagcgcccagcaaaattggcagatcaaccaat
gctggggtcaccaagacgtctccttctgccggtgctgctaaacaagctcaaggtgacaaa
tcctcagccgaatcccaagatgcaggagagcagttcaaggtcggggatcgtgtctgggtc
aacggaaacaagccgggcgtcgttcagtttttaggagagactcagtttgctccgggccag
tgggctggaatcgttcttgacgaggcaattgggaaaaacgacggttctgtgtctggtgtg
cgctactttcagtgcgaggcgttgaagggtattttcacacggccttccaagctttcacgc
acagaaggagaagcggatggaacgaccacggctcctccgtcccgcgctgcgtctcccacc
ccgtccactacatccacagtgtctgcttcaaacaagaaaccggcttcacccactaaaacc
actgctccagcctcagaactggtgcggtccaagagcgaatctgtgtccaatctgtcagag
agcggctcggtcaagaaaggagaacgggagctgaagatcaacgatcgagtgctggttgct
ggctcgaaagccggtgtggtgcgtttcctgggcgaaacagattttgccaagggtgagtgg
tgtggagtagagctggacgaacccttggggaagaacgatggcgctgtggctggaaccagg
tatttccattgtcagccaaagtatggtctgtttgccccggtgcacaaggtgacccgtata
ggcttcccctccacgaccccagccaaagccaagaccaccgtgcggaagacatccaccacc
ccgtccggactgaagcgcagccccagcgcctcctccatcagctccatgagctccgtggcc
tcgtctgctagttgcaaacccagccgaacaggactgctgacagagacgtctacgaggtat
gcgaggaagatctccggcacgacggcgcttcaggaggcgctgaaggagaagcagcagcac
atcgagcagctcctcgccgaacgcgacctggagagagcagaggttgcgaaggcaactagt
catgtgggagaagtggagcaggagctcagctcactgagagaaggacaggagcagtatgtg
atggaggtcgatgccaaaatggaccagctgcgagttcttgtggaggctgcggaccgagag
aaagtggagctgctcaaccagctggaggaggagaagaggaaagtggaggacctgcagttt
cgggtggaggaagcctgcattaccaaaggagatttggagacgcagacgcagctggagcat
gcccttcttaaggagcttgaacagagtcttctctttgaaaagaccaaagctgacaaactg
cagagggagttagaagactctagggtggccacagtctctgaaaagtcccgtatcctggag
ctggagcgggatcttgcgttgcgagtcaaggaggtggctgctcttcgtaagtcaatggaa
gctgtcccagggcaggatggggttcttgactcctctttggcagttctccaggaggagctg
agtaccctccgcacacagctggccgctcagagtcacagtcaccagacagagctgtcttcc
ctccgtgagatgcttgcaactcgagaacaagaacacagcgagtctctttcacagctccag
tcatcctcaggtcgcatatcgaaggagaacgagcagcttttagctcagctgtccaaatcg
aaggaggagaattctaatattgttgaggagtggcgctctaaactagcatcgatcgaggcc
tcgcaccagcaagccttagaggagctcaaatcctcccatgaggcgagcagatctgagctg
gtggaggcgcgcaatgctttggaacagttgaaattgacacacaaactggagctcgaggag
ctcgccaacaagcaagcttctgaagccatggcctggacgggtgaagccaaagagcacaag
gcgcagctccagaaagtcagcgaagagaacgaacggctggtggagacgctacgcaccaat
ctggagaaggcagaggagcagcacctggtggaaatggaggaagtgttgggaaaactacac
agtgctgagctcagggtgaaggagctggaggatacgggggtcaagatcggtcagcagctg
caagaaaaggcacaagaagctctggagcaaaaaacagcccttcagactctgcagtcgcag
cacagtcaagggaaccaagagatggagaggttactgacccaaatacaagaggcaaagagc
caagccagatctcaggaagaaaaggtcactgagttgagttcagttctagaggttaaacag
caagagctgagtggcctgttgcaggaaaagagctctctggagcaagaacttagtgtgctg
aaacagaatcttgaaaaaatatctaatgatcaagccaaatctgctcagagtaatcaagag
ttacgtgaggagctcaggaataaagaagaacagtgcacatctctttctgctgaactgcag
gatgtgaagagtcagtctgctggtttacagagaaatttgaaagctcacgaagaaaggatg
cagctgctgaccaaagacaaggctaaacttgagaatgacattatggacatgacgaaatca
tcgggagacagttcaactctcataacaaagctgaatgaggataccaagcagaaagagagg
agactagaggagcttcagaagcagctggaggaggagagggagaaagcagctcaggctgag
gagaaacactctctagcacaagccaagactgagaaagaagccaaaagccttgagcagaaa
caccaagcagagctttcagagctgcaggagaagatcacgcttctggagaagagcgctgaa
gacaatcaggctaaagccaaagacatgcttgctgtgggagagaaagctgttgccgatgct
gtggagcatcattcaaaagaaatgcaggaattacaagacaagtttgataaagtgcaacag
gagctccgctcgtctcaggatcaaagcctggagctgaagaaacagattgatgagctgaag
accttcgaagaaaaagctaaggtgtcagagacggcagagcaggctgcacaggcctcactg
gagacactgacccaggagaaccagcagctgctgacagacaagtctgaggctgaggatctg
gtgaagcagctcaagaactctgtgcaagaaatgcagagcaagctggacacactgaaacag
cagaacacaaagtatgaagagaatctgaactctgacagtcagaagatcagcagcctcacc
aaagacattgaggagctaaaacaagcagctgccgaaaaagaccagacagtggaggatctg
aaaaatgagaaggaaaagctgaccgtggaactgtccagcagccacaaagacagcgacatc
ctgctcaacctcaaaaaggagtgtgacagtctcaatgatcaactgaaggaggtgaaaacc
agggaaagcactttgaaacgtgaaacggagaaggagaaagcagctcttcagcagtctcta
caaacacagagtgccttggtctcagaaaaggacaaagatttagactctctgagaaatgag
ctggacacgctgaaacagcagaacacacagtatgaagagaatctgagttctgacagtcag
aagatcagccgcctcaccaaagacattgaggagctaaaacaagcagctgctgaaaaagac
cagacagtggaggctctgaaaaatgagaaggaaaagctgaccgtggaactggccaacagc
cacaaagacagcgacatcctgctgaacctgaaaaaggagtgtgacaacctcaatgatcag
ttgaaggaggtgaaaatgagggaaagcactttaacaagcgagtcggagaaggagaaagca
gctcttcagcagtctctacaaacacagagtgccttgatctcagaaaaggacaaagaatta
gactctctgagaaatgagttgaaaaaggagtgtgacagcctcaatagtcagctgaagaag
atgaaaatgagggaaagcactttaacaaaagaaacagggaaggagaaggaagcactacag
cagtctcttcaaacccagagtgccttgatctcagaaaaggacaaagaattagactctttg
agaaaagagatagcaggtttgcgtgattcgacacagacgctgcagtccaatctgaaatct
cacaggagtgagaacacagttctgcaggagagactgaagaatctggagaggagtttagct
gacgctcagatcggcagcacaggagacgacggctccgatgattctgctttaaatacatgg
aaggaggcgaaggagaatgctgagcggcaggtccagttcctgaactctgttattgtggat
ctgcagcggaagaacgacgagctcaaatctaaactggagaagatggctgaagcggcgctc
aatggcaacggtgcagctgaaacagacacgcataacagtcacacggagccagaaatgaag
aagaagccccctccgcgtctcttctgtgatatatgtgactgcttcgaccttcacgacacg
gaggactgtcccacgcaggaccagatgctggattctcctccacacaccgcttaccacggc
agccccaatgaccagcggccctactgtgacatctgtgaggtgttcggacactggacggag
tcctgcaacgacgatcagaccttctag
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integrated database retrieval system
