Garra rufa (doctor fish): 141335442
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Entry
141335442 CDS
T11039
Name
(RefSeq) endoplasmic reticulum chaperone BiP-like
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
3.6.4.10
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf03060
Protein export
grf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
141335442
04141 Protein processing in endoplasmic reticulum
141335442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
grf03110
]
141335442
04131 Membrane trafficking [BR:
grf04131
]
141335442
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
grf04147
]
141335442
Enzymes [BR:
grf01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
141335442
Chaperones and folding catalysts [BR:
grf03110
]
Heat shock proteins
HSP70 / DNAK
141335442
Membrane trafficking [BR:
grf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
141335442
Autophagy
ER-phagy
ER stress-related proteins
141335442
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141335442
Exosomal proteins of other body fluids (saliva and urine)
141335442
Exosomal proteins of colorectal cancer cells
141335442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Hydantoinase_A
FtsA
CC_BshC
DDR
FGGY_C
NPA
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
141335442
NCBI-ProteinID:
XP_073697012
LinkDB
All DBs
Position
5:complement(55391422..55399678)
Genome browser
AA seq
649 aa
AA seq
DB search
MRLLCLFLLVAGSVFAEEDDKKESVGTVIGIDLGTTYSCVGVFKNGRVEIIANDQGNRIT
PSYMAFTSEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWDDSTVQQDIKYLPFKVIEK
NKKPHIQLDIGSGQMKTFTPEEISAMVLTKMKETAEAYLGEKVTHAVVTVPAYFNDAQRQ
ATKDAGTIAGLNVMRIINEPTAAAIAYGLDKKDGEKNILVFDLGGGTFDVSLLTIDNGVF
EVVATNGDTHLGGEDFDQRVMEHFIKLFKKKTGKDVHKDNRAVQKLRREVEKAKRALSAQ
HQARIEIESFFEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLV
GGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGEEQTGKMVILDVCSL
TLGIETVGGVMTKLISRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTF
DLTGIPPAPRGVPQIEVTFEVDVNAILSVTAEDKGTGNKNKITITNDQNRLTPEDIERMV
TEAERFAEEDKKLKERIDARNELESYAYSLKNQIGDKEKLGGKLSSEDKEAIEKAIEEKT
EWLESHQEADLEDFQAKKKELEEVVQPIVSKLYGSTDGPSPEKGDKVEL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgctttgcctgttcctgctggtggccggcagtgtgtttgccgaagaggacgac
aagaaggaaagtgttgggacagtgattggaatagacctcgggacgacctactcatgtgtt
ggagtgttcaagaacggccgtgtggagatcatcgctaatgaccagggaaaccgcatcact
ccatcatacatggccttcacctccgaaggtgagcgtctcattggagacgcagcgaagaac
cagctgacctctaaccctgaaaacaccgtctttgacgccaagaggttgatcggccgcaca
tgggatgactcaactgtgcaacaggatattaaatacctgccttttaaggttattgagaag
aacaagaagcctcacatccagctggacatcggatcaggtcagatgaagactttcacccct
gaggaaatctctgctatggttctgactaaaatgaaggagactgcggaggcctacctggga
gagaaggtcacacatgctgtggtcactgttcccgcttatttcaatgacgcccagcgccag
gccaccaaagatgcgggaaccatcgccggtctgaacgtcatgagaatcatcaatgagcca
accgccgctgccatcgcttacggtctggacaagaaagacggtgagaagaacatcctggtg
tttgatctcggcggcggcacctttgacgtttctctgctgaccatcgataacggcgtcttc
gaggtggtggccaccaatggagacactcacctgggtggcgaagacttcgatcagcgcgtc
atggagcacttcatcaagctcttcaagaagaagaccggcaaagacgtgcacaaggacaac
cgtgccgtgcagaaactgcgtcgtgaggtggagaaggccaagagagcgctgtctgctcaa
catcaggcccgcatcgagatcgagtccttcttcgagggtgaagacttctctgagacgctg
acccgcgccaagtttgaggagctcaacatggacttgttccgctccaccatgaaaccagtg
cagaaggttctggaagactctgacctgaagaagtctgacatcgatgagatcgtcctggtc
ggcggctccactcgtattcccaagatccagcagctggtgaaggagttcttcaacggtaag
gagccgtccagaggaatcaaccccgatgaggccgtggcttacggagctgctgttcaggct
ggagtcctgtcaggagaagagcaaaccggtaagatggtgattctggacgtttgttcgttg
accctgggcattgagacggttggaggagtgatgaccaaactcatttccaggaacaccgtt
gtgcccaccaagaaatcccagatcttctccaccgcttccgacaaccagccaactgtgacc
atcaaggtttatgaaggtgagcgtccactgaccaaggataaccacctcctgggcaccttt
gacctgaccggcatccctccggctccccgcggcgtccctcagatcgaagtcaccttcgaa
gtcgatgtaaacgccatcctgagcgtcacggctgaagacaagggcactggcaacaagaac
aagatcaccatcaccaacgaccagaaccgactgacacccgaagacatcgagcgcatggtg
accgaggctgagcgattcgcagaggaagacaagaagctgaaggagcgcattgatgcccgg
aatgaactggagagctacgcttactccctgaagaaccagatcggagacaaagagaagctg
ggcggcaaactgtcatctgaagacaaggaggccatcgagaaggccatcgaagagaagact
gagtggctggagtctcatcaggaggcagatcttgaggacttccaggccaagaagaaagag
ctggaggaagtcgtgcagcccatcgtaagcaagctttacggcagcacagacggcccatcg
ccagagaagggcgataaagtcgagttgtaa
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