Garra rufa (doctor fish): 141335491
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Entry
141335491 CDS
T11039
Symbol
fbxw8
Name
(RefSeq) F-box/WD repeat-containing protein 8
KO
K10264
F-box and WD-40 domain protein 8
Organism
grf Garra rufa (doctor fish)
Pathway
grf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141335491 (fbxw8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141335491 (fbxw8)
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
141335491 (fbxw8)
Cul7 complex
Target recognizing subunit
141335491 (fbxw8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_SCAP
Beta-prop_EML_2
F-box
EIF3I
WDR55
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
141335491
NCBI-ProteinID:
XP_073697072
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Position
5:48593100..48627326
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AA seq
630 aa
AA seq
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MGTEDDELSAFREQWKQELKTNTTTSCKHKERYFGHPSKDSSSLHQSTSFWEKQSNASQQ
TQPTPKDQPQYVSIAEGLLDGRSSPLLDRIEQERTRKKRAPDSKALNTDAPPKKVNKGQK
LLEQFLQDLNEVNDIPFFDVELPYELALKIFHFLGRTDLGRCAQVSKLWKVLAEDEVLWH
RLCLEEGYYNGASISDSPCWKSTLRDCRNTENTVKSNWKNRVGSIRHLQYELGKVLCDVS
SCAGLVIAGYTSGDVRLWDTLHWDKSYLHPTHSVRDETPAPYVSHVRVNKTIATAAYENG
CVDVWSTETGLEPIHQYQHLQRVHALDLSPDSPAVASASGPDVRVDAPDEQGYWRSRRLL
QLPKPVDGVLVVPGKRDFPLVTAWAGESVYLLDSRWKEEQEPSVLHFVYGHPVTCVDVSP
SRAALGIKSCGWGMNDGGNKIQVYSLETSQCELTVGNSAGDFTCVNLRDSHPHLLVCGNK
DRRVRVFDLRTGSSVVSLYAHHMGVTTVQADDWKIVSGGGEGLVSVWEMRIGAKLWEMHN
RHPVRHVRFNTSTLVTANVPDEKSPRGACITDDDLTAHRRYRGLICHYDFSMDSSAQDHV
LPICRSNYTEPTGHNYNIVLAMPYDILNGP
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggggacggaagacgacgagctttcggctttccgagagcaatggaaacaggagttaaaa
acaaataccactacatcatgtaaacacaaagaaagatattttgggcatcccagtaaagac
agctcatctcttcaccaaagcactagcttttgggagaaacaaagcaatgcatcacagcaa
actcagcccacaccaaaggatcagccgcagtatgtgtcgatcgcagagggtttgttggac
gggagaagcagcccactgctggacagaatcgaacaggagcgaacgcgcaagaagcgcgct
cccgatagcaaagcgctcaacacagacgcgcccccgaaaaaagtcaacaagggccagaaa
ctgcttgaacagttccttcaggacctgaatgaggtgaatgacatcccattctttgatgtg
gagttgccctatgaactggcgctcaagattttccacttcctgggcagaacggatctagga
cgatgtgctcaggtgtctaaattgtggaaggtgctggctgaggatgaggtcttgtggcac
agattgtgcctggaggaaggttattacaatggggcaagtatctctgactccccctgctgg
aagagcacactcagagactgccgaaatacagaaaacaccgtgaagtcaaactggaagaat
cgtgttgggtccattcgccacctgcagtatgagttgggaaaggtgttgtgtgacgtcagt
tcctgcgctggtctagtaatcgctggctacacctctggtgatgtgcgcctgtgggacacg
cttcactgggacaagtcttacctacatcccacacactcagtcagagatgaaacccctgca
ccttacgttagtcacgtacgcgtcaataagaccatagctacagccgcttatgagaatggc
tgtgtagatgtgtggagcactgaaaccggtcttgagcctattcatcagtatcagcacctc
cagagggttcatgctctggatctaagtcccgacagtccggctgtggcctctgcatcagga
ccagatgtgcgggtggacgccccagatgaacagggctattggagatcacgacgtctcctt
cagttaccaaagcctgtagatggggtattggtggtgccagggaagcgggacttccctttg
gtcacagcgtgggcaggtgaaagcgtttatctgctggattccagatggaaggaagaacag
gaaccaagtgttcttcactttgtatacggccatccagtgacctgtgtggatgtgtcaccc
agcagagccgccctggggatcaagagctgtggatggggcatgaacgacgggggaaacaag
attcaggtgtacagcctggagaccagccagtgcgagctgaccgtggggaactcggcgggg
gacttcacctgcgtcaacctgagagacagccaccctcacctgctggtgtgtgggaacaaa
gacagacgagtgagagtgtttgacttgcgtactggctcttcagtggtctccttatatgcc
catcacatgggcgtgaccaccgtccaagcagatgattggaagatcgtgagcggaggtggc
gagggattggtcagtgtgtgggagatgaggataggagccaaactctgggaaatgcacaac
agacacccggttcgccacgtacggttcaacaccagcaccctggtgacagccaacgtccct
gatgagaagagtcctcgcggggcttgtatcacagacgatgacctcaccgctcaccgcaga
tacagagggctgatctgtcactatgacttctcaatggactcgtctgcccaggatcacgtt
ctgcccatctgcaggtccaactacacagagcccactggacacaactataacattgttttg
gcgatgccgtatgacatactgaatggtccttag
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