Garra rufa (doctor fish): 141335651
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Entry
141335651 CDS
T11039
Symbol
krt1-c5
Name
(RefSeq) keratin, type 1, gene c5
KO
K07604
type I keratin, acidic
Organism
grf Garra rufa (doctor fish)
Pathway
grf04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141335651 (krt1-c5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141335651 (krt1-c5)
04147 Exosome [BR:
grf04147
]
141335651 (krt1-c5)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
141335651 (krt1-c5)
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
141335651 (krt1-c5)
Exosomal proteins of other body fluids (saliva and urine)
141335651 (krt1-c5)
Exosomal proteins of colorectal cancer cells
141335651 (krt1-c5)
Exosomal proteins of melanoma cells
141335651 (krt1-c5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Rab11-FIP3
Rod_CreS
GapR_DNA-bd
Tup_N
YabA
DUF1664
GAS
DUF6779
Motif
Other DBs
NCBI-GeneID:
141335651
NCBI-ProteinID:
XP_073697278
LinkDB
All DBs
Position
5:complement(20227266..20235923)
Genome browser
AA seq
428 aa
AA seq
DB search
MTSSYSMHSHSLGRQPSFSSMSMRDGGARGRSKVPLSLSSASTLSLSRSTSLGNGLNILS
NLSLNGLGVGASEKETMQGLNDRLASYLEKVRSLEKSNADLELKIKQLMKERAPKGHDIE
GLIAQAHAIGQEVRKKTLENARIMLEIDNAKLAADDFRVKWEAEATLCQSVERDCHALRR
AKSDHDQIIATLRGDLDSLKEELYFLKKNHEEEKNTLKTRLANEQVNVEVDAAQGPDLGA
IMAELRVQYESIARKNKEDAEMWYLKKLENVQSEVKESNEALRCAQSELNERRRFLQALE
VELDSLRKQVGVLEGNLGETNQKYTLEIERLQGSLTQLEDELSQLRLDMQRIKTDYEQLL
RIKQNLELEIATYRRLLDGEEVIKETPTPKKEPEVRTRKIVKVVTQTMVNGKVVDESSEV
EQIEERKK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgacctccagctactctatgcacagccactctctgggacggcagccgtctttctccagc
atgtctatgcgtgatggtggggctcggggacgctccaaagtcccactgtcgctctcctct
gccagtactctgtccctgtctcgttccacctctctgggaaatggcttaaacatcctaagc
aacctctcactgaatggtctaggagttggcgccagtgagaaggagaccatgcaaggtcta
aacgaccgacttgccagctatctagagaaggtgcgttctctggagaagtccaatgctgac
ctggagctgaagattaaacagctgatgaaggagcgagcacccaagggtcacgacatcgag
ggactgatagctcaagcacatgcaattggacaagaggtgaggaaaaagactttggagaat
gctcgtataatgcttgagattgacaatgccaagcttgcagcagatgactttagggtcaaa
tgggaggcagaagctactctttgccagtcggttgagagggactgtcatgctctgagacga
gcaaaatctgatcatgatcagatcatcgcaacccttcgaggagacctggacagtctgaaa
gaggagctctatttcctcaagaagaatcatgaagaggagaagaacacactgaagacccgt
ctagccaatgaacaagtgaacgtggaggtggatgcagcccagggcccagacctgggagcc
atcatggcagagctaagggtgcaatatgagagcatcgcacgcaagaataaagaggatgct
gagatgtggtacctaaagaagctggagaacgtgcagtcagaggtgaaggagagtaacgag
gctctgcgatgtgctcagagtgaacttaatgaaagacgacgcttcctgcaggcgttagag
gtggaactggacagtctgcgcaaacaggttggtgttctggaggggaacctcggagagacg
aatcagaagtacacgcttgagatcgagcgtcttcagggttcgctcacacagctggaggat
gaactctcacagctgcgcctggacatgcaaagaattaaaactgattacgagcagttactg
cgcatcaaacagaatctggagctggagatcgccacctacaggaggctgctggatggagag
gaagtgataaaagagacacccactcctaaaaaagaacctgaagtgagaaccaggaagatt
gtgaaggtggtcacccagactatggtaaatggaaaggtggtggatgaatccagtgaagtt
gaacagattgaagaacgaaaaaagtga
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