Garra rufa (doctor fish): 141335746
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Entry
141335746 CDS
T11039
Symbol
xylt1
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
grf00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
grf01100
Metabolic pathways
Module
grf_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
141335746 (xylt1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
141335746 (xylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
grf01003
]
141335746 (xylt1)
Enzymes [BR:
grf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
141335746 (xylt1)
Glycosyltransferases [BR:
grf01003
]
O-Glycan biosynthesis
Glycosaminoglycan
141335746 (xylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
141335746
NCBI-ProteinID:
XP_073697397
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All DBs
Position
1:44787028..44881270
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AA seq
919 aa
AA seq
DB search
MFGSLCARKLARRSRSALIAALTVLLVQTLIVWNFSSLDTGEDRKDNGREKRDRIGINKA
YSEYPKSGFQKRHHQPPLGKASSRHKQQPDGYYSHRPKEKVRVDSNNENSVPKDFENIDN
SNFGARSQTQRHAPSKHKQGLLEKAHVQQSLSKHSNEVIQYAQNKGGFNQTRTDLQRRAN
PTLHPQQSQQHRHHLQQAKRSAAPTADIKYDQPPKCEISGKEAISALSRAKTKECRQQIA
EVYCRHKERQLMPEKVTRYCPVEGKVNMNVQWEDDSMETVPAVPVRIAFMLVVHGRAARQ
VQRLFKAIYHTSHFYYIHVDQRSNYLHRQMMALTRQYPNVRVTPWRMSTIWGGASLLTMY
LQSMKDLLAMRDWSWDFFINLSAADYPIRTNDQLVAFLSKYRDMNFIKSHGRDNARFIRK
QGLDRLFFECDTHMWRLGDRKIPEGISVDGGSDWFLLNRIFVEYVINSQDDLVTNMKRFY
AYTLLPAESFFHTVLENSPHCESMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKP
SDLPRFQQTTRPTFFARKFEASVNQEIVNQLDTFLFGSLPQGTPGLKAYWENVFDEADGI
HSLSDAHLTHYHAFARLGLARTASSLQGDTSDNSCRYFAMGHPVSVHIYFLSDEFQGYLV
RHHATNLATSKLETLETWVMPKQFFKFTNPPNTFNRLQYAEIGTDWDAKERIFRNFGNLM
GPMDEPVGMQKWGKGSNVTVTVVWIDPTNVIAATYDILIDASAEFTHYRPPLNLPLRPGM
WTVRVLHHWSPVAETRFLITPLTHHKHLPIRQEDALKTHNGPAKNSYMEQSFHGLNPILN
IPVHLGQVEAAEHNAELTGSELERWVDSLVGEVWSAVDVCSMGPSGCPVMQTCRETVWSS
LSPDPKSQLGPPKTNGRIR
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcagtctgtgcgcccgtaaactggctcgccgatcgcggtcagcgctaatcgcc
gcgctgacagtgctgctggttcaaacgctcatcgtgtggaacttcagcagtctggacacg
ggagaagaccgaaaagacaacggcagagagaagagggaccgaatcggcatcaacaaagcc
tacagcgagtacccgaagagcggcttccagaagaggcatcaccagccgccgctggggaaa
gcgtctagtcgacataaacagcaaccggatggctactactcacaccggcccaaggagaaa
gtccgtgtggacagcaacaacgaaaactctgttcccaaagactttgagaatatagacaac
agtaatttcggagcgcgttcgcagactcagagacacgcgcccagcaagcacaaacaaggc
cttctggaaaaggcgcatgtgcagcaaagcctaagcaagcattccaatgaggtcattcag
tatgcacagaataaaggtggcttcaatcagacacgcactgaccttcagcggagggccaat
cccaccctccatccacagcaatcccagcagcaccggcaccaccttcagcaggccaagcgg
tcggccgcgcccaccgccgacatcaagtacgatcagccgcctaaatgcgagatcagcggc
aaagaggcgatctccgccctgtctcgtgccaagaccaaggagtgccggcagcagatagca
gaggtttactgccgccacaaagaacgccagctcatgcccgagaaggtcacccgttactgc
cccgtagagggcaaagtgaatatgaatgtgcaatgggaggacgactctatggagactgtg
cctgcggtaccggtgcggatagccttcatgttggtggtccacggacgggccgcacgccag
gttcagcgtctcttcaaggccatataccacacgtctcatttctactacattcatgtggac
cagcgatccaactacctgcacaggcagatgatggctctgactcgccagtatcccaacgtc
cgggttacaccgtggcgcatgtccacgatatggggtggtgccagtctgctcaccatgtat
ctgcagagcatgaaggacctgctggccatgcgagattggtcctgggatttcttcatcaac
ctgagtgctgctgattacccaatcaggaccaatgatcagctggtggccttcctgtccaaa
tacagagatatgaatttcatcaagtcccacgggagagataacgctcgattcatcagaaaa
caaggcttggaccggcttttcttcgagtgtgacacccatatgtggcggcttggagacagg
aagattccagaaggcatatccgtggatggaggctctgactggtttctgctaaaccgaatc
ttcgtggagtacgtcatcaactctcaagatgaccttgtgaccaacatgaagcgtttctac
gcgtacacactcttacctgcggagtcgttcttccacacagttctggagaacagcccgcac
tgcgagagcatggtggacaacaacctccgcatcactaactggaatcgaaagctgggctgc
aagtgtcaatacaagcacatcgtggactggtgcggctgctcgcccaatgacttcaagccc
tccgatctgccccgtttccagcaaaccaccaggcccacattcttcgcacggaagtttgaa
gccagtgtaaatcaagagatagtgaatcagctggataccttcctgttcgggagtttgccc
cagggcactccgggtctcaaggcctactgggagaatgtttttgatgaagcggatggtatt
cacagcctgtccgacgcgcatctcactcactatcatgcctttgcccgattgggtctggca
cggactgccagctcgctacagggtgacaccagtgacaacagctgcaggtattttgccatg
ggacatcctgtgtctgtccacatctacttcctgtctgatgagttccagggatacctggtc
aggcatcatgccaccaacctggcaaccagcaaactggaaaccctggagacctgggtcatg
cctaaacagttcttcaagttcaccaatccacccaataccttcaacagactgcagtatgca
gagattggaacagactgggatgctaaggaaaggatattccggaattttgggaatctgatg
ggacccatggatgagcctgtgggaatgcagaaatgggggaaagggtcaaatgtgaccgtg
actgtggtgtggattgaccccaccaatgtcatcgccgccacctacgacatcttgatcgac
gccagtgctgaattcactcactacaggcctccgctgaacctgcccctgcggcccggcatg
tggaccgtacgtgtgctgcatcactggagccctgtcgcagagactcgctttctcatcact
cccctcacccaccacaaacacctgcctatacgccaagaggatgctttaaaaacgcacaac
gggccggccaagaacagctacatggagcagagtttccatggcctgaaccccatcctcaac
atcccggtccacctgggtcaggtagaagcggccgaacacaacgcggagcttacggggtcc
gaactggagcgctgggtggacagtctagtgggcgaggtgtggtcagctgtggacgtgtgt
tcaatgggtcccagtggctgtccggtcatgcagacttgcagggaaacggtgtggagctct
ctcagcccagacccaaagtcccagctgggcccacccaaaaccaacggacgaatcaggtag
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