Garra rufa (doctor fish): 141335754
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Entry
141335754 CDS
T11039
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141335754 (ythdc1)
Spliceosome [BR:
grf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
141335754 (ythdc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
141335754
NCBI-ProteinID:
XP_073697402
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All DBs
Position
5:complement(7003779..7023368)
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AA seq
681 aa
AA seq
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MSADRRDEKDGELNVLEDILTDAPDQDDELYNPESEHDINEKKGSKRKHERVDSQDAKRL
RASGHTNRQTLKRAAPSSGSKKTSSVRGRHAPEDLYEDRKNHAGRGGAPRADLSKGYGEK
GLSRSRDSQRRIKPLMPELTEKMRRTSEDSTGRASRSSREEEAHSEEYATGSSVASSEGN
CSDVEEEGAMQEEGEEKEGDEEEEEDEEEEEEEEGDEEEEEYELEEEDPREGTEQNDYDT
RSEASDSQSDSVSFSEGESVHSASGSEASGSEKKHEKLSSSVRAVRKDQTSKLKYILREA
RFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVVLVFSVRESGKFQGFARL
SSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKTAHLSNPWNEHKPVKIGR
DGQEIELDCGTQLCMLFPPDESIDLYQVIHKMRHKRRMHSEPRSRGRLPHREPVPRDMGR
RRPEEYDMHNRKRPRIDYTPEFPQRPGFMQDPRNPPVDRRFSGVRRDVFLNGSYNDYMRE
FHHSIGPPPPWQGMAPYPGMEHPPQHPYYQHHHPPPPQAHPPYSGHHPMPHDARFREKRV
VRSFASSLHDYDMRVDDFLRRTQAVVSGRRSRPRERDRQRERDRPRDGRRDRERERGRER
DRERERIRDREREKERGRYRR
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgacaggagagatgagaaagatggggaactgaatgtactggaagacattttg
actgatgctcctgaccaggacgatgagctctacaacccggagagtgaacatgacattaat
gagaaaaaagggtctaaaaggaagcacgaacgagtagacagccaggatgcaaagcggctg
agagcgtcaggacacactaacagacagacattaaagagagctgccccttcttctgggtcc
aaaaagacaagcagtgtcagaggaagacatgcaccagaagacctctatgaagacagaaag
aaccatgctggaagagggggagcaccccgggctgatttatctaaaggatatggtgaaaaa
ggcctgtcccgcagcagagactcccaaagacggatcaaacccctgatgcctgagctgaca
gagaaaatgcggaggacaagtgaggacagcacgggcagagcgagtcgctcctccagagag
gaagaagctcattcagaagaatatgcgaccggcagctctgtggcttcctctgagggcaac
tgctcggatgttgaagaggaaggagccatgcaggaggaaggggaagagaaggaaggagat
gaggaggaggaagaggatgaggaggaagaagaggaggaggaaggggatgaagaagaggag
gagtatgaactggaggaagaggacccacgggagggaaccgaacagaacgactacgacact
cgcagtgaggccagtgattcccagtctgactctgtgtccttctcggagggagagtctgtg
cattcagcctcaggctcagaggcgtcaggatctgaaaagaaacatgaaaaactgtcctct
tctgtcagagctgtgagaaaggatcaaaccagcaagctgaagtatatcctgagagaggcc
aggttttttctaattaagagcaacaatcatgaaaacgtttccctggctaaagcaaagggt
gtttggtccactttgcccgtcaacgagaaaaagctcaacgcagcttttcgctctgctcga
agtgttgtgctcgtcttttccgttagggagagtgggaagtttcaaggttttgctcgactc
tcgtctgaatctcatcatggaggttctcccatccactgggtcttgcctgcaggcatgaat
gccaagatgcttggaggagtctttaaaattgactggatttgcaggcgggaattacctttc
accaaaacggctcacctctccaacccatggaatgagcacaagcctgtgaagattggacgt
gatggacaggagatcgaactagactgcgggacacagctgtgcatgctcttcccacccgac
gagagcattgacttgtatcaagtcattcacaaaatgcgccacaagaggaggatgcactca
gagcctcgatctcggggccgactaccccacagagagcccgtccctcgggacatgggaagg
cgtcgtccagaggaatatgacatgcacaaccggaagcggcccaggattgattacacgcca
gaattccctcagagaccaggttttatgcaagaccctcgcaatccaccggtggacaggcgc
ttctctggtgttagaagagacgtgtttctcaatggatcttacaatgactatatgagagaa
ttccaccacagcattggacctccacccccatggcaaggaatggccccatatcctggaatg
gagcatcctcctcagcacccatactaccagcatcatcatcctcctccaccgcaggctcac
ccaccgtactccggacaccaccccatgccccatgatgcacgcttcagagaaaagagggtt
gtgcgctcctttgcctccagtttgcatgactacgacatgcgtgtggacgatttcctgaga
cgaacgcaggcggtggtgagcggacgtaggagccgaccgcgtgagcgagaccgacagaga
gagcgcgaccggccacgggacggccgtcgtgacagagaacgagagcgcggcagagaacgg
gaccgtgagagagagcggattcgagaccgcgagagggagaaggagaggggccgataccgg
agatag
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