Garra rufa (doctor fish): 141335886
Help
Entry
141335886 CDS
T11039
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
141335886
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141335886
Ion channels [BR:
grf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
141335886
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ion_trans
Ank_3
YVC1_C
Gasdermin_protease
HemY_N
Motif
Other DBs
NCBI-GeneID:
141335886
NCBI-ProteinID:
XP_073697546
LinkDB
All DBs
Position
5:12460221..12472681
Genome browser
AA seq
779 aa
AA seq
DB search
MSKSRDSSPTFFLETDDLTEEERSKAKQMKKSTSKEKRPMDSNFLDETEKPAHRIKFNLH
FDRGIRNVKEEPAQQDRERFNLKRLFDAVSSGDVSKLEGLHQYLHKNMKRLTDSQYKSKG
KTALLKALLNLEEGENDTVEHLLEIAEKLGDLTNFVNAAYTDSYYKGQTALHVAIEQRSL
KFVEMLVKKGADVHAKACGKFFQPNQKTCFYFGELPLSLAACTNQPDIVDFLMDNPYQAV
DVRKRDSHGNTVLHALVSIADNSPENTEFVIAMYDHILIKSDQLHPKIKLEEIKNIERLT
PLTLAAKTGKVGLLKHIVQREFPGCRHLSRKITEWAYGPVCSSLYDLASLDTYEENSALE
IIVYGSEIPNRLEMLHIEPFNKLIEEKWERFAKRMFLFNFIVYVIYLFILTAVAYHREAG
KDFSNNQPLKPPYPYRKDSSGILLLTGHIITTTGALYLFIRGLIDMLRKRPKFESLIIDG
YTDQLFFLQAALFLACVLLYCFGRDQYLACLVLCLALSWVNLLYFSRGSKNMGIYSVMIQ
KMVLGEIRRFLVVYIVFLIGFSAAVVTLLDEKVPSKGRSLFISFGNENCTKPSFKNIYFT
TLELFKFTIGMGDLEFTDQYQYVEVFYVLLIVYIVMTYILMLNMLIALMNQRVDEMSVES
TSIWKLQRAITTLDMEWILPRCLKTRLRSGEEKDLGDEQEPDRRWCFSVEEVNWNQWNRN
LGAVTEDPGKCMSVPSPTKPQREPSRRRLLQTFSKRWIQRPQHREEQELSPIAEASSAI
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatcaagagacagcagccctacatttttcctggagacggatgacctgacagag
gaggaaaggtcaaaggccaaacaaatgaagaaaagcacctcaaaggaaaaaaggcctatg
gattctaattttctggatgagacagagaagcctgcacacagaattaaatttaacctacat
tttgacaggggaatcagaaacgtgaaagaagaaccagctcagcaggacagagagaggttt
aacctcaagaggctttttgatgccgtgtccagtggcgatgtgtctaaactggagggttta
catcagtacctgcacaaaaacatgaaacggctcaccgactctcaatataagtccaaagga
aagacagccctgctaaaagcacttttaaatctggaggaaggcgagaacgacacagttgaa
catctgctggaaatagcagagaaactgggagatttaacaaattttgttaatgctgcatac
acagacagttactacaaaggtcagacagcactccatgttgcaattgaacagaggagttta
aaatttgtagagatgctggttaagaaaggtgccgacgttcatgctaaggcctgtgggaaa
ttctttcagcccaatcaaaaaacatgcttctattttggtgagctgcccttgtcgctggca
gcttgcactaatcagccagacattgtggacttccttatggacaacccataccaggcagtg
gatgtcaggaagagggactctcatggaaacacggtgcttcacgcactagtatccatagct
gataacagtcctgaaaacacagagttcgtcattgccatgtatgaccacatcttaatcaaa
tctgaccaacttcaccccaagatcaagctggaggaaatcaaaaatatagaaagactcacc
ccactcacactagctgccaaaacaggaaaagtggggctgttaaagcacatcgtgcagcgg
gagtttccggggtgccgacatctgtcacggaagatcacggagtgggcctacggtccagtg
tgctcgtctctgtatgacctcgcctctctggacacctacgaggagaactccgcgctggag
ataatcgtttacggcagcgagattcctaaccgcctcgagatgctccatattgagccattt
aacaaactaattgaagagaagtgggagagatttgcaaaacggatgttcttgttcaacttc
atcgtttatgttatctaccttttcatcctcactgcagtggcttatcaccgcgaagcaggg
aaggactttagcaacaaccaaccattaaagcctccatatccttatagaaaagacagcagt
ggcattctgcttctgacaggacacatcataactaccactggagcactttacttatttatt
agagggttaatagatatgttaaggaagcgtccaaaatttgagtccctgatcatagatgga
tacacagatcagcttttttttctgcaggctgcgctattcctggcatgtgttctactgtac
tgctttggtcgggatcaatatctagcctgtttagttctgtgtcttgccttgagctgggta
aatctactctacttctccagagggtccaaaaacatgggaatctacagtgtcatgatacaa
aagatggttcttggagaaattcgcagattccttgtcgtgtacatcgtcttcctcattggg
ttctctgcagctgtggtaactctccttgatgaaaaggtccctagtaaaggacgatcttta
tttatttcttttggaaatgaaaactgtacgaagccctcattcaagaacatctacttcacc
actctggagttgttcaagtttacgattggcatgggagatctggagttcaccgatcagtat
caatatgtagaggtcttctatgtgctgctaattgtgtacatagtgatgacttacattttg
atgctgaacatgctgatcgctctgatgaatcaaagagtggatgagatgtccgtagagagc
accagcatctggaaactacagcgtgcaatcaccaccttggacatggagtggattcttccc
cgctgcctgaagacaaggctgcgctccggggaagagaaggacctgggtgatgagcaggag
cctgatcgacgctggtgcttcagtgtggaggaagtcaactggaaccagtggaacagaaac
ctgggtgcagttacagaggaccctgggaaatgcatgtctgtaccttccccaaccaaacct
cagagagagcccagccggcgaagactcctgcaaacgttcagtaaacgttggatacagaga
ccacaacacagagaagaacaggagctgagtcctatagctgaggcctctagcgccatctga
DBGET
integrated database retrieval system
