KEGG   Garra rufa (doctor fish): 141336007
Entry
141336007         CDS       T11039                                 
Symbol
tfdp1b
Name
(RefSeq) transcription factor Dp-1b
  KO
K04683  transcription factor Dp-1
Organism
grf  Garra rufa (doctor fish)
Pathway
grf03083  Polycomb repressive complex
grf04110  Cell cycle
grf04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    141336007 (tfdp1b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    141336007 (tfdp1b)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    141336007 (tfdp1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:grf03000]
    141336007 (tfdp1b)
   03036 Chromosome and associated proteins [BR:grf03036]
    141336007 (tfdp1b)
Transcription factors [BR:grf03000]
 Eukaryotic type
  Helix-turn-helix
   Fork head/winged helix cell cycle-controlling factors, DP
    141336007 (tfdp1b)
Chromosome and associated proteins [BR:grf03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     141336007 (tfdp1b)
SSDB
Motif
Pfam: DP WHD_E2F_TDP
Other DBs
NCBI-GeneID: 141336007
NCBI-ProteinID: XP_073697616
LinkDB
Position
6:complement(55296770..55308257)
AA seq 398 aa
MAKDAGRKETNGEIKLFVNQSLSPGKPAGVLSLLTVHPASVTAVKQILPKTFTAAGANVL
PHVVIGTPQRSGVPTGVLLTSPRTPTAHFHTPQTQTQESSPWSTGRSRKGDKNGKGLRHF
SMKVCEKVQKKVVTSYNEVADELVAEFSSGDNNISPNDSHVYDQKNIRRRVYDALNVLMA
MNIISKDKKEIKWIGFPTNSAQECQDLEAERQRRLERIKQKQSQLQELILQQIAFKNLVQ
RNRQTEQQNKRPPPPNTVIHLPFIIVNTSKRTVIDCSISNDKFEYLFNFDNLFEIHDDVE
VLKRMGMAFGLESGRCSAEQLKIVKTLVPKALQPYVTEMAQGAVNQLIGDLSHVATDRGA
SSSNGSHHSSSRVETPTSYMEDEEEEDDEEDFDDDEDD
NT seq 1197 nt   +upstreamnt  +downstreamnt
atggctaaagatgctggacgcaaagaaaccaatggagagataaagctgtttgtcaaccag
agtctgagtccagggaaacctgcaggtgttctgtccctcctgacggttcatccagcatca
gtgactgcggtcaaacagattctgcccaaaactttcaccgctgcaggcgctaatgtgctg
ccacacgtggtgatcggcactcctcagaggagcggtgtccccaccggtgtcctgttaacc
agcccgcgcacgcccaccgcacacttccacacgccccagacacagacacaagagtcctcg
ccctggtcgaccgggcgcagcaggaagggcgataagaacgggaagggtttgcggcatttc
tccatgaaggtgtgtgagaaagtgcagaagaaagtggtgacttcctacaatgaggtggca
gacgagctggtggccgagttcagctctggagacaacaacatctccccgaacgattcgcac
gtgtatgaccagaagaacatccggagacgggtttacgacgctctgaacgtcctgatggcc
atgaacatcatctccaaagacaagaaggagatcaaatggatcgggttccccaccaactca
gcgcaggagtgtcaggatctggaggccgagcggcagagacgactggagagaatcaaacag
aagcagtctcagctgcaggagctcatactgcagcaaattgccttcaagaacctggtgcag
cgcaatcgtcagacggagcagcagaacaagagacctcctcctccaaacacagtcatccac
ctgcccttcatcatcgtcaacaccagcaagagaaccgtcatcgactgcagcatctccaac
gacaagtttgagtatctcttcaacttcgacaacttgttcgagatccacgacgacgtggag
gtgctgaagcgcatgggcatggcgttcggcctggagtcgggccgctgcagcgcggagcag
ctgaagatcgtcaagaccctcgttcccaaagccctgcagccgtacgtcacagaaatggcg
caaggtgccgtaaaccagctgatcggagacctgtcccatgtggccactgaccgtggcgca
tccagctccaacggatctcaccacagcagctccagggtggagacgcccacatcctacatg
gaggatgaagaggaggaggatgacgaagaggactttgatgatgatgaggacgactag

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