Garra rufa (doctor fish): 141336007
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Entry
141336007 CDS
T11039
Symbol
tfdp1b
Name
(RefSeq) transcription factor Dp-1b
KO
K04683
transcription factor Dp-1
Organism
grf Garra rufa (doctor fish)
Pathway
grf03083
Polycomb repressive complex
grf04110
Cell cycle
grf04350
TGF-beta signaling pathway
Brite
Transcription factors [BR:
grf03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
141336007 (tfdp1b)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
141336007 (tfdp1b)
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Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
141336007
NCBI-ProteinID:
XP_073697616
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All DBs
Position
6:complement(55296770..55308257)
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AA seq
398 aa
AA seq
DB search
MAKDAGRKETNGEIKLFVNQSLSPGKPAGVLSLLTVHPASVTAVKQILPKTFTAAGANVL
PHVVIGTPQRSGVPTGVLLTSPRTPTAHFHTPQTQTQESSPWSTGRSRKGDKNGKGLRHF
SMKVCEKVQKKVVTSYNEVADELVAEFSSGDNNISPNDSHVYDQKNIRRRVYDALNVLMA
MNIISKDKKEIKWIGFPTNSAQECQDLEAERQRRLERIKQKQSQLQELILQQIAFKNLVQ
RNRQTEQQNKRPPPPNTVIHLPFIIVNTSKRTVIDCSISNDKFEYLFNFDNLFEIHDDVE
VLKRMGMAFGLESGRCSAEQLKIVKTLVPKALQPYVTEMAQGAVNQLIGDLSHVATDRGA
SSSNGSHHSSSRVETPTSYMEDEEEEDDEEDFDDDEDD
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagatgctggacgcaaagaaaccaatggagagataaagctgtttgtcaaccag
agtctgagtccagggaaacctgcaggtgttctgtccctcctgacggttcatccagcatca
gtgactgcggtcaaacagattctgcccaaaactttcaccgctgcaggcgctaatgtgctg
ccacacgtggtgatcggcactcctcagaggagcggtgtccccaccggtgtcctgttaacc
agcccgcgcacgcccaccgcacacttccacacgccccagacacagacacaagagtcctcg
ccctggtcgaccgggcgcagcaggaagggcgataagaacgggaagggtttgcggcatttc
tccatgaaggtgtgtgagaaagtgcagaagaaagtggtgacttcctacaatgaggtggca
gacgagctggtggccgagttcagctctggagacaacaacatctccccgaacgattcgcac
gtgtatgaccagaagaacatccggagacgggtttacgacgctctgaacgtcctgatggcc
atgaacatcatctccaaagacaagaaggagatcaaatggatcgggttccccaccaactca
gcgcaggagtgtcaggatctggaggccgagcggcagagacgactggagagaatcaaacag
aagcagtctcagctgcaggagctcatactgcagcaaattgccttcaagaacctggtgcag
cgcaatcgtcagacggagcagcagaacaagagacctcctcctccaaacacagtcatccac
ctgcccttcatcatcgtcaacaccagcaagagaaccgtcatcgactgcagcatctccaac
gacaagtttgagtatctcttcaacttcgacaacttgttcgagatccacgacgacgtggag
gtgctgaagcgcatgggcatggcgttcggcctggagtcgggccgctgcagcgcggagcag
ctgaagatcgtcaagaccctcgttcccaaagccctgcagccgtacgtcacagaaatggcg
caaggtgccgtaaaccagctgatcggagacctgtcccatgtggccactgaccgtggcgca
tccagctccaacggatctcaccacagcagctccagggtggagacgcccacatcctacatg
gaggatgaagaggaggaggatgacgaagaggactttgatgatgatgaggacgactag
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