Garra rufa (doctor fish): 141336101
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Entry
141336101 CDS
T11039
Name
(RefSeq) proto-oncogene vav-like
KO
K05730
guanine nucleotide exchange factor VAV
Organism
grf Garra rufa (doctor fish)
Pathway
grf04510
Focal adhesion
grf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141336101
09142 Cell motility
04810 Regulation of actin cytoskeleton
141336101
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
CAMSAP_CH
SH3_1
SH3_9
CH
SH2
C1_1
SOS1_NGEF_PH
PH
RHG20_PH
CDC24
zf-RING-like
LZ3wCH
C1_2
PH_10
Motif
Other DBs
NCBI-GeneID:
141336101
NCBI-ProteinID:
XP_073697713
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Position
6:1610372..1639583
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AA seq
845 aa
AA seq
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MELWRQCAGWLIQCRVLPENHRVTWENAQVCDLAHALRDGVLLCQLLNNLLPQSVNLRQI
NLRPQMSQFLCLKNIRTFLCACQEKFGMKKNELFEAFDLFDVRDFAKVIDTLSILSQTPL
AQQRGFRPFPDEACVGDDDIYTGLSDQIDDTVEEDDDLYDCVEEDENEGDDIYEDLMRTE
EPEIQQKVEVDKRSCCLQEIRQTEEKYTNTLDSILQHFLKPLQPFLQPVDIENIFINVQE
LANTHRSLLHELQESILHLRAENLYQIFINYKERLLLYGRYCSQVEASTKHLDKITSTHE
DVKMKLEECSMRANSGRFSLRDLLMVPMQRVLKYHLLLQELVKHTVDQQEKENLRTALDA
MRDLAQCVNEVKRDNEIIRQITTFQLCIENMSQSLALYGRPKIDGEFKICSLEKKSKQDR
YGFLFDKALLVCKKRSGESMELKELIELQHYQLRDEPSGEKDSKKWTHTFLLMDLYGQGG
FDLFFKTRELKKKWLEQFEMALSNMCPENSTANGHEFQMHCFEDTTSCKACQMLLRGIFY
QGYRCSRCKMAAHKECLGRVPACGRNSELSGTLKKGKTMRLASQRQAKPGLPKMEVCVDY
YGLPPPPVAFGQPLPLTVGDVVELTRAEVDLQWWEGRNLTIGEVGWFPCSKVQPFVPAPP
PDLSGLPWFAGNMDRAGAKTLLMSRSDGTFLVRQKDAGEFAISLKFNMDTRHIKVTYSEG
LYRINEKKAFKGLFELVQYYQENSLKECFKDVDSRLQTAYKQPEQSASPQHSNTRHAGMS
ERYHGTAKVRYDFSARDRTELSLREGDTVKILSKKAHNGWWKGEVYGRVGLFPANYVEEE
HSDYC
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtggagacagtgtgccggatggctgattcagtgccgagtgcttccagagaac
cacagagtcacctgggagaacgcacaggtgtgtgatctggcccatgcgctgagagatggc
gttttactctgtcagctgctcaataacctgctgcctcagtcggtcaacctgcgtcagatt
aacctgcgaccccagatgtctcagttcttgtgtctgaagaacatcaggacgttcctgtgc
gcctgtcaggagaaattcggcatgaagaagaacgagcttttcgaggcctttgacctgttt
gatgtccgagactttgcaaaggtgattgacacgctgtccatcctgtcacaaacaccgctg
gcccagcagagaggattccggccttttccagatgaagcatgtgttggagatgatgacatc
tacaccggcctctcagaccagattgatgacacggtggaggaagatgatgatctttacgac
tgtgtggaggaagatgagaatgaaggagatgatatttatgaagatctgatgaggacagag
gaaccagaaatacagcagaaggttgaagtggacaagaggagctgctgtcttcaggaaatc
agacagacagaggagaaatacacaaacacactggattcaatacttcagcactttcttaaa
ccactgcagcctttcctgcagcctgtggacattgagaacatcttcatcaacgtccaagaa
ctggccaatacccatcgctctctgcttcacgagctgcaggagtccatactgcatttacga
gccgagaatctctatcagatcttcatcaactacaaggagaggctgttgctgtatggacgt
tactgcagtcaggtggaagcttccaccaaacacttggacaaaatcaccagcacgcatgaa
gatgtgaagatgaaactggaggagtgctcaatgcgggccaacagcggcaggttttcactg
cgagatctgctcatggttcccatgcagagagtcctgaagtatcatctgctgctgcaggag
cttgtgaaacacacagtggatcaacaagagaaggaaaacttgcgtactgcactggatgca
atgagggatctggctcagtgtgtgaacgaagtgaagagagacaatgagatcatccgtcag
atcacaacgtttcagctgtgcatcgagaatatgtctcagtctctggcattatacggacga
cccaaaatagacggagaattcaaaatctgcagccttgagaagaaatccaaacaggacagg
tatggctttctcttcgacaaggctctgttagtgtgtaagaagcgcagcggcgagagtatg
gagctgaaggagctgattgagcttcagcattaccagctgagagacgagccgtcaggagag
aaagacagcaagaagtggacgcacacgttcctgctgatggacttgtacggtcagggcggc
ttcgatctcttctttaagacgcgagagctgaagaaaaagtggctggagcagttcgaaatg
gcgctgtccaacatgtgtccagagaacagcacggctaatggtcatgagtttcagatgcac
tgttttgaagacaccacatcatgtaaagcctgtcagatgctcctcagggggatcttctat
cagggctaccgctgctcgcgctgtaagatggccgctcataaagagtgtctgggtcgagtt
cctgcatgtggacgaaactctgagctgtcaggaacgctcaagaagggtaaaaccatgagg
ttagcgtctcaaagacaggccaaaccaggtctgccgaagatggaggtgtgtgtggattat
tacggtctccctccgccgccggtggcgttcggtcagccgctcccgctgactgtgggcgac
gtggtggagctgacgcgtgcagaggttgatctgcagtggtgggagggcaggaatctgacc
atcggagaggtcggctggtttccctgcagtaaagttcagccgtttgtgccggcgcctcct
ccagatttatcaggacttccctggttcgctggtaacatggaccgggccggtgctaaaact
ctgctgatgtctcgctccgacgggacgtttctggtgcggcagaaagacgccggagaattc
gccatcagcctcaagttcaacatggacaccagacacataaaggtcacatactcagaggga
ctctacaggatcaacgagaagaaagccttcaaggggctgttcgagctggtgcagtactat
caggaaaactcgctgaaagagtgttttaaggatgtggactccagactgcagacggcgtac
aagcaaccggagcagagcgcatctccgcagcacagcaacacacgccacgcaggtatgagc
gagcgctaccacggcacggctaaagtgcgctatgatttctctgcgagggaccggactgaa
ctctctctgcgggagggagacactgtcaaaatcctctccaagaaagctcacaacggctgg
tggaaaggagaggtgtacggcagggtgggcctttttcctgctaattatgtggaggaggag
cattcagattactgctga
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