Garra rufa (doctor fish): 141336104
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Entry
141336104 CDS
T11039
Symbol
kitb
Name
(RefSeq) KIT proto-oncogene, receptor tyrosine kinase b isoform X1
KO
K05091
proto-oncogene tyrosine-protein kinase Kit [EC:
2.7.10.1
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf04010
MAPK signaling pathway
grf04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141336104 (kitb)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
141336104 (kitb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
grf01001
]
141336104 (kitb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
grf04090
]
141336104 (kitb)
Enzymes [BR:
grf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
141336104 (kitb)
Protein kinases [BR:
grf01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
141336104 (kitb)
CD molecules [BR:
grf04090
]
Proteins
141336104 (kitb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
Ig_5
Ig_4
Ig_6
C2-set_2
C1-set
VEGFR-1-like_Ig-like
Motif
Other DBs
NCBI-GeneID:
141336104
NCBI-ProteinID:
XP_073697717
LinkDB
All DBs
Position
6:39419006..39437562
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AA seq
986 aa
AA seq
DB search
MGHVWFLRTVLLLFAVPGGWFKPVITPNATHLVIPKGGQLELSCHDDAEASKVRWMREKG
RKIEGGKEEDGASIILLTSTQVQHMGRYICENTQTQEKSSIYIYVKDLENPFVRTMVDGL
LVREGEDGTISCLVTDPAVKNLSLLTCTGSGLPAGLTYIAHPQKGITIKNVSRAFEGCYV
CAGEMDEKPVKSNPYSLSVRPVPETVPVISLTRIENVLLIQGEEFLLNCSTININHDIRL
SWSMPSEAMANQSRKSNILPGSREYQHSIGLHIASVTMDDAGLYRCIARNEKGVSMATVS
LEVYEHGFINLTEREDSVMEVKEGESMTLSVEMSSYPTPTDVYWIYNNQQLKNTSEHVIT
LHNQQYRYISELRLVRVHGSEGGIYTFSANHTYASVNKSFTVHVICKPVIVSQEGPVDGQ
VRCVASGYPVPKISWYYCELPHTRCSHLLNATQADEEFAVVTVSGAEFGRSEVESRLNVS
KGKFHTLECVATTQGEQAYTLFSISERTVPHKLFTPLLSGVVSTSVLLSFFLVVLLYKYM
QKPKYEIHWKVIDSFDGNNYTYIDPTQLPYDPKWEFPRERLRFGKILGSGAFGKVVAATA
YGLCSADTVTTVAVKMLKPSAHSTEKEALMSELKVLSYIGNHINIVNLLGACTVGGPTLV
ITEYCCYGDLLNFLRRKRDAFFSSKTGDGYYKNLLSQTQPSREGTDNGYMPMRSYQKRSN
QTGRCISKEHKQNTTNFTTNIYYLTFFNLYSLSEWCDDKDDLSLDTEDLLSFSYQVAKGM
DFLTSKNCIHRDLAARNVLLTQGRVAKICDFGLARDITRDSNYVLRGNARLPVKWMSPES
LFACVYTFESDVWSYGILLWEIFSLGNTPYPGIPVGSTFYKMIQDGYRMSEPEFAPSEVY
EVMRWCWSADPLKRPTFKKLVERTELLLSETTKHDYLNLSTSGSCDAFVPPGLQRAQRLS
SVGSSTASTQPLLQATNDVFLEHQSI
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgggtcacgtttggtttttacgcacagttctacttttattcgctgtacctggaggatgg
tttaaacctgttatcactcccaatgccactcatctggtgatacctaaaggtggacaactg
gagctcagttgtcatgatgatgcagaggcgagcaaggtgcgatggatgcgggaaaaaggt
cggaaaattgaaggagggaaagaggaagatggagccagtatcatcctcctcacctccaca
caggtacagcatatgggccggtacatctgtgaaaacacacaaacacaagagaagagctcc
atctacatctatgtgaaagatttggagaacccttttgtgcgcactatggtggacggcctt
ttggtgagggaaggagaggatgggactatttcttgtttagtaacagatccagccgtcaaa
aacctctcccttctgacctgtactggttctggtctacctgctggactcacctacattgca
caccctcagaaagggatcaccatcaaaaatgtctccagagcttttgagggctgctacgtt
tgtgcaggagagatggatgaaaaacctgtgaaatcaaacccatatagcttgagtgtgcgg
ccagtcccagagacagtgccagtgatcagccttacccgaatcgaaaatgtgcttctgatc
cagggtgaggagtttttgctcaactgcagcaccattaacatcaaccatgatatccggctg
agctggagtatgccttctgaagcgatggcaaaccagagccgtaaatcaaacatcctgccc
ggttcccgagaatatcagcactcaataggacttcacatcgcatctgtgacgatggatgac
gcaggactctatcgatgtattgcgaggaatgagaaaggtgtctctatggcaactgtcagt
ttggaggtttacgagcatggtttcattaacctcacggagagagaggacagtgtgatggag
gtgaaagagggagaaagtatgaccctcagcgtggagatgtcttcataccccacacccact
gatgtctactggatttataacaaccaacagctcaaaaacacatccgaacacgtcattaca
ctgcataatcagcagtacaggtacatcagtgaattaaggctggttcgagttcatggatca
gagggcgggatctatactttctcagccaatcacacatatgcatctgtcaataagtcattc
accgtccatgttatatgcaaaccagtgatagtttcccaggaggggccggttgatggacag
gtgcggtgtgttgcttcaggatatcctgtcccaaaaatatcttggtattactgcgagctg
ccacatacacggtgttcccacctgttgaatgcaacacaggcagatgaagagtttgctgtg
gtaacagtatcaggggcagaatttggacgaagtgaggtggagagtcgacttaatgtcagc
aaaggaaaatttcacactcttgagtgtgtggcaacaacccaaggcgagcaggcctacacc
ctattttccatcagcgagagaacagtgcctcataaactcttcacacctctgttgtctggt
gtcgtgtccactagtgttctgctcagcttctttttggtggttctgctctacaaatacatg
cagaaacccaaatatgagatccattggaaggtgatcgacagttttgatggcaacaattac
acctatatagacccaacccagctgccttatgaccccaaatgggagtttccacgggagaga
ctgcgttttggtaaaatcctcggctctggagcatttggtaaagtggtggcagctacagca
tatggactttgctcagctgacactgtcactactgttgctgtaaaaatgctaaaaccgagt
gctcactccactgagaaggaggctctaatgtcagagttaaaagtgctgagctacattggc
aatcatataaacattgtgaatttacttggcgcctgtacagtaggaggccccactctggtg
atcacagaatactgttgttatggtgaccttttgaatttcctaagaagaaagcgggatgca
tttttcagttccaaaacaggcgatggatattacaaaaatctgctcagccaaacacagcct
tcaagagagggcactgataatggatacatgcccatgaggtcgtatcagaagagatcgaat
cagacaggtaggtgcatctcaaaagaacacaagcaaaatacaaccaacttcactaccaac
atttattatttgacatttttcaatctgtattctctctcagaatggtgcgatgataaagat
gatctctctttggatactgaggatttactcagcttctcatatcaagtggctaaaggcatg
gacttccttacatccaaaaattgtatccacagagatctggctgccaggaatgtattactg
actcagggtcgggtagcgaagatttgtgatttcggtttggcacgtgacatcactagagat
tccaactacgtcctgagaggaaatgcacgcttaccggtgaaatggatgtccccagaaagc
ctgtttgcttgcgtgtacacttttgagagcgacgtctggtcctacggcatcttattgtgg
gagatcttctctctgggtaacacgccgtatccaggtattccagttggatccacattctat
aagatgatacaagatggatacagaatgagtgagcctgaatttgccccaagtgaagtttat
gaggtaatgagatggtgttggagcgctgaccctctgaagagaccaaccttcaagaaactg
gtggaaaggactgaactcctgctgtcggaaaccaccaaacatgattacttgaatctcagc
actagtggaagctgtgacgcatttgttcctccaggcctgcagagggcacaaaggctgagt
tctgtgggcagctcgacagcctcaactcaacccctgctgcaggcaacaaatgatgttttt
ctggaacatcagagcatataa
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