Garra rufa (doctor fish): 141336209
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Entry
141336209 CDS
T11039
Symbol
pnpla6
Name
(RefSeq) patatin-like phospholipase domain-containing protein 6
KO
K14676
lysophospholipid hydrolase [EC:
3.1.1.5
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
141336209 (pnpla6)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.5 lysophospholipase
141336209 (pnpla6)
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Ortholog
Paralog
GFIT
Motif
Pfam:
NTE_Ploop
cNMP_binding
Patatin
LapA_dom
DUF515
MscL
Podoplanin
Motif
Other DBs
NCBI-GeneID:
141336209
NCBI-ProteinID:
XP_073697861
LinkDB
All DBs
Position
6:14724602..14757543
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AA seq
1348 aa
AA seq
DB search
MGQSTSGPESPEPPQQDRFGNIKSLVEEQLQTSMVVGIVIGAGVAIVLIAVLIFFVLRRM
QLRKLEAQEAPKYRFRKRDKVLFYGRKIMRKVSQSTSSLVGSTSSSRPRLKKKQKMLNIA
KKILRFKKEVPILQMKEPPPSVLEADLTEFDVANSHLPSEVLYMLKNVRVLGHFEKPLFL
ELCKHMVFLQFQQGEYVFRPGQPDSSIYVVQDGKLELCLTALDGKDGVVKEVYPGDSVHS
LLSILDVITGHQRPYKTVSARAAEVSTVLRLPVDAFLSIFEKYPESLVRVVQIIMVRLQR
VTVLALHNYLGLTNELFSHEMQARPSPVSPHPTRSSPVRHSKRFGSLTVPDKHREAAVQN
ATGGDHGKDGGATPTLSRTISMPVDIAGIQKSLRSDFDMAYERGRISVSAEDGVPIPPAF
TREQRERKVTVDEIPSSVYLYPEEESGMENIFCPFQGRPNATQFEEAQKEILKLMKIEDP
ALLNGRVTFHHAKAGSVLARQGDQDVSLHFVLSGCLHVYQKMIDKQEAVCLFVTQPGEMV
GQLAVLTGEPLIFTIKAERDCTYLKISKSDFYEIMREQPSVVLSAAHTVAIRMSPFVRQM
DFAIDWMAVEAGRALYRQDDQSDCTYIVLNGRLRSVIRKANGKKELVGEYGRGDLIGVVE
ALTRQPRATTVHAVRDTELVKLPEGTLNNIKRRYPQVVTRLIHLLGQKILGNLQQARGPF
SSSALGLPSMASSPDVTNPASNLSTVAVLPVCDDVPINAFNLELSHALSAIGPTLLLTSD
IIRERLGASALDSIHEYRLSGWLAQQEDINRIVLYQTDSGMTPWTQRCIRQADCILIVGL
GDQEPALGELEQMLENTAVRALKQLVLLHREDGPGPSRTVEWLNMRSWCSGHLHLKCPRR
IFSRRSQSKLREVYEKVFEKTADRHSDFSRLARVLTGNSIALVLGGGGARGCSHVGVIKA
MEDTGIPIDIVGGTSIGSFIGALYAEERNAVRVKQRAREWSKAMNSVFKTVLDLTYPITS
MFSGSAFNTSISKVFEDKQIEDLWLPYFNVTTDITASSMRVHKDGSLWRYVRASMTLSGY
LPPLCDPKDGNLLMDGGYINNLPADIARNMGTKTVIAIDVGSQDETDLCNYGDSLSGWWL
LWKRINPWAEKVKVPDMAEIQSRLAYVSCVRQLELVKKSAYCEYIRPPIDRFKTMDFGKF
DEIYDVGYQHGKLVFTEWARGDIIENMLKDHRSADYNDSKKTDSCTCPSADFTDLAEIVS
RIEPVQSYLGADAEESDYATEYEEDGMDIVREEEGEEEEEEEAEDPEDQSPGEWGPNGIF
TPDEEKTVRQRKNNTRDPNMDFSGVSDC
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgggacagagcacatcgggcccagagtccccagagcctccacagcaggacagatttgga
aacatcaagagtttagtggaggagcagctgcagacaagcatggtggtgggaattgtaatc
ggcgctggagtcgccatcgttctcatcgctgtcctcatattttttgtcctgcgcaggatg
cagctccgcaaacttgaggctcaggaagccccgaagtatcgttttcgtaaaagagacaaa
gtcttgttttatgggaggaagataatgaggaaagtgtctcaatccacctcttcactagtg
ggctccacttcttcctccaggccccgcctcaaaaagaaacaaaagatgctgaacattgcc
aaaaagatcctgcgctttaaaaaggaagtgcccattctgcagatgaaggaacctcctccg
tcagtgctggaggcagatctcacagagtttgacgtggccaattctcacctgccatctgag
gtgctctacatgctcaagaacgtgcgcgtgttgggtcactttgagaagccgctgtttctg
gagctttgcaagcacatggtgtttctgcagttccaacaaggcgaatatgtcttcagacct
ggccagcctgatagcagcatatatgtggtacaggatggcaagctggagttgtgtcttact
gcactggatggaaaggatggagtggtcaaagaggtttaccctggagacagtgttcacagt
ctactgagcatccttgacgttatcacaggtcaccagagaccatataaaacggtctcggca
agagcggcagaagtgtctactgtcctcagactgcctgtcgatgcattcctgtccatcttt
gagaaatacccagagagccttgtgcgggtcgttcagatcatcatggtccgtcttcagaga
gtgactgttctggccctgcacaactacctggggctcaccaacgaactcttcagccatgaa
atgcaggctcgtccctctcctgtctctccccatccaacacgctccagtcctgtacgacac
agcaaacgctttggcagtctcaccgttcctgataaacatcgcgaggccgctgttcaaaat
gctactggtggggatcatggaaaggatggtggcgcaacaccaaccctcagtaggaccata
tccatgcctgtcgacattgcgggaattcagaagagtctgcgttcagattttgacatggct
tatgagagaggccgtatctctgtttctgctgaggatggagtgcccattccacctgctttt
acacgagagcagcgggagagaaaggtgacggtggatgagattccttcaagtgtgtatttg
tatcctgaggaggagtcagggatggagaacattttttgtccatttcaaggacgacctaat
gctacacaattcgaggaggcccagaaagagattctcaaactcatgaagattgaggaccca
gcactgctgaatgggagggtgacgtttcatcatgctaaggctggatctgtgttagccaga
cagggagaccaggatgtgagtctgcattttgtcctgtctggatgtcttcacgtctatcag
aagatgattgacaagcaggaagcagtgtgtttgttcgtgacccagccgggtgagatggta
ggtcagctggctgtactcacaggagagccgctcatcttcaccatcaaagcagagcgtgac
tgtacctacctcaagatctccaaatctgacttctatgagatcatgcgtgagcagccaagt
gtagttctcagtgcagctcacaccgtggctatccgcatgtccccgtttgtacgtcagatg
gatttcgccattgactggatggctgttgaagctggacgggccctgtacaggcaagatgat
cagtcggactgtacctatattgtgctgaatggacgtctgcgttctgtcatccgaaaagca
aatgggaagaaggagctggttggagagtatggacgaggagatctgattggagttgtggag
gctttgactcggcagcctcgtgccaccacagtccatgcagtcagagacactgagctggtg
aagcttccagaaggaacactcaacaacattaagagaagatacccgcaggtggtgacacgc
ttgatccatctgctgggccagaagattttggggaacctccaacaggcccgtggacctttc
tcgagctctgcccttggtctgccaagcatggcgtcgagtccagacgtcactaacccagcc
agtaatctctccactgtggccgtgcttccagtttgcgatgatgtgccaatcaatgccttc
aatctggagctcagccatgccctcagcgccataggaccgaccttgctgctcaccagtgat
atcatcagagagagacttggcgcttctgctttagacagtattcatgagtacaggttatca
ggttggttggctcagcaagaggacattaatcgtatagtgctgtatcagacggacagcggt
atgaccccatggactcaacgctgtatccgacaagctgactgtattctcattgtggggctt
ggagaccaggaacctgcacttggagagttggagcagatgttggagaacacagcagtacga
gctctgaagcagttagttctgttgcatcgtgaggatgggccgggcccgtcgagaaccgtt
gagtggctgaacatgcgaagctggtgctctggacaccttcacctcaagtgcccccgtaga
attttctcacgaagaagccaatccaaactgcgagaggtatatgaaaaggttttcgagaag
actgcagacagacacagtgatttctcacggctggccagggtactcacaggaaacagcatt
gcccttgtactgggcggaggcggagccaggggttgctctcatgttggtgtaatcaaagcc
atggaggatacaggaattcccatcgacatagtgggaggaacttccattggctcattcatt
ggtgctttgtatgcagaggagagaaatgctgttcgggtcaagcagagagcaagagagtgg
tccaaggcaatgaattctgtattcaaaacagtactggaccttacttatccaatcacgtcc
atgttttctggctctgccttcaacaccagcatctcaaaagtctttgaggacaaacaaatc
gaggacttgtggctgccttactttaatgtgaccacagacatcacagcttcttccatgcgt
gttcataaagacggctccctgtggcgctatgtcagggcgagcatgaccctttccgggtac
ctgccacccctctgcgacccaaaagatggaaacctgctcatggatggaggatacatcaac
aacctgccagcggacatagctcgtaatatgggcacaaaaacagtcatcgccattgacgtg
ggcagccaggatgagactgatctctgtaactacggtgacagtctttcgggctggtggctg
ctatggaaacgaatcaacccgtgggcggagaaagtgaaggtacctgacatggctgaaatc
cagtcccgtttggcctatgtatcttgtgtacggcaactggaacttgtcaagaagagcgca
tactgcgagtacattcggccacccatagaccgctttaagaccatggactttgggaaattt
gatgaaatctatgatgtgggttatcaacatggtaaactggtgtttactgagtgggctcgt
ggggacattattgaaaatatgctgaaagaccatcgctcagcggactacaatgacagcaag
aagactgattcctgcacgtgtcctagtgcagacttcactgatctagctgaaattgtgtcc
aggattgagccggtgcagagctacttaggagccgatgcagaggagtctgactatgcgacg
gagtatgaggaggacgggatggacatagtaagagaggaggagggtgaggaagaggaagaa
gaggaggctgaagaccctgaagaccagtctcctggagaatggggaccaaatgggatcttt
acaccagatgaagagaagacagtccgtcagaggaagaacaacaccagggaccccaatatg
gatttctctggagtgtcagattgctga
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