Garra rufa (doctor fish): 141336287
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Entry
141336287 CDS
T11039
Symbol
vps37c
Name
(RefSeq) vacuolar protein sorting-associated protein 37C isoform X1
KO
K12185
ESCRT-I complex subunit VPS37
Organism
grf Garra rufa (doctor fish)
Pathway
grf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141336287 (vps37c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141336287 (vps37c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
grf04147
]
141336287 (vps37c)
Membrane trafficking [BR:
grf04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
141336287 (vps37c)
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141336287 (vps37c)
Exosomal proteins of colorectal cancer cells
141336287 (vps37c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
tRNA_bind_3
Sec1
Peptidase_C30
Motif
Other DBs
NCBI-GeneID:
141336287
NCBI-ProteinID:
XP_073697945
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All DBs
Position
6:18296763..18304381
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AA seq
334 aa
AA seq
DB search
MLILSCPSKSMEKLQDLNQSELQDLLDNSERVESMALESDEIQNIQLEREMALAANRSLA
EQNLDMKPRLETERVRLVGKYAELEEVREKYKQHCAMRDCIMGQVSPEGLLSRLQTEGAN
TEADSEVLADEFLEGSITLDSFLERFLSLRSLAHTRRVRIEKLQEILSQKSKGMGDASVT
SQTGANQDAGSSSQWQQPQPQQQQSSKINAPSNSSTSALPYTPYPVAPPSASTAGTTNPS
TAFQPYPSQGAPFPPSTGYTAPRPAFGPPACPYPTQPPFPGPPFGQFGPAPAPYPAPYAY
GGYNYPTGPHGPSTQSPTARPLYRPGFGVPQPYS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgttgatcctaagctgtcctagcaaatcaatggagaagcttcaagacctcaaccagtcc
gagttgcaggatttgctggacaactcggagcgggttgagtctatggcattggagtctgat
gagattcagaacattcagttggagagagagatggctttggctgccaaccgcagtctggcc
gagcaaaatctagacatgaagccccgactcgaaacagagagggtgcgactggtgggaaaa
tatgctgaacttgaggaagtgagggagaaatacaaacaacactgtgccatgagagactgt
atcatggggcaggtgtctccggaggggctgttgtctcgtctgcagacagagggcgccaac
acagaggcagattcagaggttttagcagacgagtttctcgaaggctcgataacgctggac
tccttcctcgaacgcttcctttccctccgctctctggctcacacgagacgagtacgcatt
gaaaagctgcaagaaattctcagccaaaaaagcaaagggatgggagacgcttcagtgacg
tcacaaaccggtgccaatcaggatgctggatcatcatcgcagtggcaacaaccgcagcct
caacagcagcagagctccaaaatcaacgcaccctccaattcctccacttccgctctgccc
tacaccccctaccccgttgctcccccgtcagcctccacagcgggcaccactaaccccagc
acagcgtttcagccctaccccagccagggtgccccgttccctccatcaacaggctacaca
gcacccaggcctgcgtttggtcctcccgcttgcccataccccacccaaccaccgtttcct
ggccctccttttgggcagtttggtcccgcgcctgccccgtaccctgctccatatgcttat
ggagggtataactaccccacaggcccccatgggccatcaacccaatcacccacagctaga
ccgctttataggccaggttttggggtaccacaaccatactcttga
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integrated database retrieval system
