Garra rufa (doctor fish): 141336307
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Entry
141336307 CDS
T11039
Symbol
xpo1a
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
grf Garra rufa (doctor fish)
Pathway
grf03008
Ribosome biogenesis in eukaryotes
grf03013
Nucleocytoplasmic transport
grf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141336307 (xpo1a)
03008 Ribosome biogenesis in eukaryotes
141336307 (xpo1a)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
141336307 (xpo1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141336307 (xpo1a)
03009 Ribosome biogenesis [BR:
grf03009
]
141336307 (xpo1a)
03016 Transfer RNA biogenesis [BR:
grf03016
]
141336307 (xpo1a)
03036 Chromosome and associated proteins [BR:
grf03036
]
141336307 (xpo1a)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
141336307 (xpo1a)
Ribosome biogenesis [BR:
grf03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
141336307 (xpo1a)
Pre-60S particles
141336307 (xpo1a)
Transfer RNA biogenesis [BR:
grf03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
141336307 (xpo1a)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
141336307 (xpo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Sec7-like_HUS
TPR_TNPO3_IPO13_2nd
BspA_v
Motif
Other DBs
NCBI-GeneID:
141336307
NCBI-ProteinID:
XP_073697978
LinkDB
All DBs
Position
6:8743257..8760621
Genome browser
AA seq
1071 aa
AA seq
DB search
MPADMTMLADHTARQLLDFSQKLDITLLDNVVNSMYYDVGSQQRLAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILESVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDANSV
EKEGVYIAKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVNLFSLTMIQLKQMLPL
STNIRLAYSNGRDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSTSQHFDVPPRRHLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQERLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVRQLGSILKTNVRACKAVGHPFVLQLGRIYLDMLNV
YKCLSENISSAIQSNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LEAVLIDYQRNVPAAREPEVLSTMATIVNKLGAHITGEIPKIFDAVFECTLEMINKNFEE
FPEHRTHFFYLLQAVNSQCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTM
LQNIAQEEGAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISI
TLNAGTSANNQSYVQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDSADLFLEEREAALRQAQEEKHKLQMSVPGILNPHELPEEMCE
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccggcagacatgaccatgttggcggatcacacagcacggcagttgctggacttcagt
caaaagctagacatcaccctgctggacaatgtcgtcaactccatgtactatgatgtggga
tctcagcaaagactggcacaagaagttctcaccaacttgaaggaccacccggatgcctgg
accagagtggacaccatattggagttctcccagaacatgaagacaaaatactatgctctt
cagatactagagtcagtgatcaaaacgcgctggaagattcttccacgaaaccagtgtgaa
ggaattaagaaatatgttgtcggactgattatcaagacttcctctgatgccaacagtgta
gagaaggaaggggtttacatagcaaagctcaacatgatcctggtgcagattctgaagcag
gagtggccgaagcactggcccacattcatcagtgacattgtgggagcgagtcgcaccagt
gagagcctgtgtcagaacaacatgatcatcctaaagctcctcagtgaggaggtgtttgac
ttttccagcgggcagatgactcaggtcaaagccaaacacctaaaggacagtatgtgcaac
gaattttcccaaatattccagctgtgccagtttgtcatggaaaattcccagaatgcccct
ctggtccacgccaccttggagaccctccttcgattcctgaactggattccgctgggctac
atttttgagaccaaacttatcagcacgctggtgtacaagtttctgaatgttccgatgttc
cggaacgtcactctaaaatgtctgacggagatcgcaggtgtcagtgtcagtcagtacgag
gagcagtttgtgaacttgttcagtctcaccatgatacagctcaaacagatgctgcctctg
agcacaaatatccgtctggcgtattcaaatggaagagatgatgagcaaaacttcatccag
aacctcagtctgtttctctgcaccttcctcaaagagcatggacagctgatagagaagaga
ctcaacctcagagagacgcttatggaggccctgcattacatgctgttggtgtctgaggtg
gaggagacggagatctttaagatctgtctggagtactggaaccatctggccgctgagctc
tacagagagagtcccttctctacttccacctctccgctgctgtcgaccagccaacacttc
gacgtgccgccccgcagacacctctacttgcctgtgctttccaaggtgcgtcttctgatg
gtgagtcgcatggccaaaccggaggaggttctggtggtggagaacgatcagggcgaggtg
gtgagagagttcatgaaggacaccgactccatcaacctctacaagaacatgagagagact
ctggtctatttgactcatttggactatgccgatacggagcggatcatgacagagaagctt
cataatcaagtgaacggtaccgagtggtcctggaggaacctgaacacgctgtgctgggcc
atcggctccatcagtggtgccatgcatgaggaggatgaaaagagattcctcgtcacagtc
attaaggacctgctgggtctgtgtgaacagaaaagagggaaagacaacaaggccatcatc
gcctctaacatcatgtacatcgtcggccagtacccacgattcctcagggctcactggaag
ttcctcaagactgtcgtcaacaagctctttgagttcatgcacgagacacatgatggtgtg
caagacatggcctgtgacaccttcatcaagatcgctcagaagtgcagaaggcattttgtg
caggttcaggttggggaggtgatgcccttcatcgatgagatcctcaacaacatcaacacc
atcatctgtgacctgcaaccgcagcaagtgcacacattctacgaggctgtgggatacatg
atcggtgcacagacagatcaggctgtccaggagcgcctgatcgagaaatacatgcttctt
cccaaccaggtgtgggacagcatcatccagcaggccaccaagaacgtggacatcctgaaa
gacccagagacggtgcgtcaactaggcagcatcctgaagaccaatgtaagagcgtgtaaa
gccgtgggtcaccccttcgtcctgcagctaggccgcatttacctggacatgctcaacgtc
tacaagtgcctgagcgagaacatctcttctgccatccagagcaacggtgagatggtgacc
aagcagcctctgatacgaagcatgcggacggtgaagagagagacgttgaagctcatctcc
ggatgggtcagccgctccaacgacccacagatggtcggagagaactttgttccacctttg
ctggaggcggttcttattgactatcaaaggaacgttccagcagctcgagaaccagaggtg
ctcagcactatggcaaccatcgtcaacaagcttggcgctcacataacaggggagatcccc
aagatattcgatgctgtgtttgaatgcaccctcgaaatgatcaacaagaactttgaggag
ttccccgagcacaggacgcatttcttctacctgctgcaagccgtcaactcccagtgtttc
ccagcattcctgtccatcccaccagcacagttcaaactggttctggactccatcatctgg
gccttcaaacacaccatgaggaacgtggctgacacagggcttcagatcctgttcacgatg
ctgcagaacatcgcacaggaagagggagcagctcagagcttctatcagacctacttctgc
gacatcctgcagcacattttctcggttgtcacggatacgtctcatactgctggtctgacg
atgcatgcctccatcctcgcctacatgttcaacctggtggaagaaggtaaaatcagcatc
actttgaacgcaggcacctcggccaacaatcagtcttacgtgcaggagtacgtggccaat
ctgctgaagactgccttcccacatctgcaagatgcccaggtgaaggtgtttgtcacaggt
ctgttcagcttgaatcaggacattcctgcttttaaagagcacctcagggacttcctggtc
cagatcaaggagtttgctggcgaggactccgcagatctgttcctggaggagagggaagcg
gctctgcgtcaggctcaggaggagaaacacaagctccagatgtctgtcccgggaatcctc
aaccctcacgagctcccggaggaaatgtgtgaatga
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