Garra rufa (doctor fish): 141336370
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Entry
141336370 CDS
T11039
Symbol
cps1
Name
(RefSeq) carbamoyl-phosphate synthase [ammonia], mitochondrial
KO
K01948
carbamoyl-phosphate synthase (ammonia) [EC:
6.3.4.16
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00220
Arginine biosynthesis
grf00250
Alanine, aspartate and glutamate metabolism
grf00910
Nitrogen metabolism
grf01100
Metabolic pathways
grf01200
Carbon metabolism
grf01230
Biosynthesis of amino acids
Module
grf_M00029
Urea cycle
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
141336370 (cps1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
141336370 (cps1)
00220 Arginine biosynthesis
141336370 (cps1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
grf01002
]
141336370 (cps1)
Enzymes [BR:
grf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.16 carbamoyl-phosphate synthase (ammonia)
141336370 (cps1)
Peptidases and inhibitors [BR:
grf01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
141336370 (cps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
GATase
CPSase_sm_chain
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
Peptidase_C26
Motif
Other DBs
NCBI-GeneID:
141336370
NCBI-ProteinID:
XP_073698051
LinkDB
All DBs
Position
6:56021782..56095573
Genome browser
AA seq
1500 aa
AA seq
DB search
MSKILTVCGVAKSLRLGWRNWRPSTRLLSMKAQTAHLVLEDGTKMMGYSFGHDHSSAGEL
VFNTGLVGYPEALTDPSYRGQILTLTYPIVGNYGVPNTQELDELGLRKNVESDRIQVSGL
LVQDYSSEYSHWNSVKSLAQWLQEEKVPALFGIDTRMLTKIIRDKGTVLGKIEFDGQPVE
ITDPNQRNLVAEVSTKEIQVFGKGNPIKVVAVDCGIKHNIIRLLVKCGAEVHLVPWDQDL
MSLEYDGLFISNGPGDPSLAKTLIQNVRKVLESDRPQPVFGICMGNQITALAAGAQSYKL
PMGNRGQNQPVVNVMTGQAFITAQNHGYGIDSESLPPGWSPLFINANDGTNEGIMHKTKP
VFTAQFHPEAKGGPTDTEFLFDAFISLIRKGKEGSIASVMPKKPAVTQRIQVSKVLVLGS
GGLSIGQAGEFDYSGSQAVKAMKEENLQTVLINPNIASVQTNEVGTKQADSVYFLPVTPE
FVTEVINVERPDGILLSMGGQTALNCGVELFQRGVLQKYGVQVLGTPVESIMATEDRQLF
SDKLMEISEKIAPSIAVKTVRYALKAADEIGYPVMLRSAYALGGLGSGLCANKEKLEDTA
RKALAMSSQILVEKSLLGWKEVEYEVVRDVADNCVTVCNMENFDPLGIHTGDSIVVAPSQ
TLSNEEYHMLRETAIKVVRHLGIVGECNIQYALHPSSLEYCIIEVNARLSRSSALASKAT
GYPLAFVAAKLALGIPLPDIKNAVSEQTTACFEPSLDYIVTKIPRWDLDRFHGMSREIGS
AMKSVGEVMAVGRTFEESIQKALRMCHPSVDGFVPRLPLKRAWAEQQDLQQEISLPSSTR
IFSLAQALHSGVTVDQIHDLTAIDKWFLHKLKHITAMEQLLGQYNSTTVPRDLLLKAKMD
GFSDRQVGQALNVTEGEARVLRLNQNIRPWVKQIDTLAAEYPAATNYLYCTYHGQEHDLD
FKDHGTMIVGCGPYHIGSSVEFDWCAVSSIRALRQMGKRTVVVNHNPETVSTDFDECDRL
YFEELTLERILDITQQEGCTGCIVSVGGQIPNNLAVPLHQNGVKILGTSPLQIDRAEERS
VFSSILDDLGVGQAPWRALSSLEDAVSFASSVGYPCLLRPSYVLSGSAMNVVYGEDEMKR
FLEEATQVSQDHPVVITKFVRGARELEVDAVARMGKVLAHAITEHVEDAGVHSGDATLML
PTQTISQGALEKVKTATQKIAKAFEISGPFNTQFLVKGNDVMVIECNLRASRSFPFVSKT
IGVDFIDVATRVMVGEPLEESRLPSLENPIIPVDYVGIKAPMFSWPRLREADPVLRCEMA
STGEVACFGPNIYSAFLKAMLSTGFKLPQKGILIGIQHSFRPNFLSTAHQLHEEGFKLYA
TEGTSVWLNANDVPTIPVAWLSHESKNTTLPSISRLISEGHIDLVVNLPNNNTKFLKDNF
QIRRMAVDYGVPLITNFQVVKLFAEAIRYSSDLDATSLFHYRQREPRLSKSSAAWLTCNL
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatcttaacagtctgtggagttgccaaatcactgaggctgggatggcgcaac
tggagaccgtcgacaagattactcagcatgaaggctcagactgcgcacctggtgcttgaa
gatggcacaaagatgatgggctactcctttggccatgatcactcttcagctggagagctg
gtctttaacacaggactagttggctatcctgaggctctgacagaccccagttacagagga
cagatcctgacccttacctaccccattgtgggaaactacggtgttcctaatacacaggaa
ctggatgagctgggattgaggaaaaatgtggaatctgatcgcattcaggtgtcaggattg
ctggttcaggactacagttctgagtacagtcactggaactctgtgaaatcactggcacag
tggcttcaagaagaaaaggtgccggcactttttggtatagataccaggatgctgacaaaa
attattagagacaagggtactgttttaggcaagattgaatttgatggacagccagtggag
atcacagacccaaaccagcgaaatcttgtagctgaagtctcaaccaaggaaattcaagtg
tttgggaaaggcaatcctatcaaagtggttgctgttgactgtggaatcaagcacaacatt
atacggctacttgtcaagtgtggagcagaggtgcatttagtgccatgggaccaagacctg
atgagtttggagtatgacggtctgttcatctccaacggcccgggagatccttcactggca
aagaccctgattcaaaatgtccgcaaggtattggaaagtgaccgtcctcaaccagtgttt
ggtatttgtatgggaaatcaaatcacagctctggcagctggtgcacagtcttataaacta
ccaatgggaaacaggggccaaaaccagccagttgtgaatgtgatgactggccaagccttc
atcacagctcagaatcatgggtatggcattgacagcgagtcccttcctccaggctggagt
cctctcttcattaacgcaaatgatggaaccaatgagggcattatgcataaaaccaagcca
gtgttcacagcgcagttccaccccgaggccaaaggaggacccacagacacagagttcctg
tttgatgctttcatctctctgataagaaaggggaaggaagggagcattgcatctgtgatg
ccaaagaaacctgctgttactcagagaatccaggtgtccaaagtgctggtgctgggatct
ggaggcctgtccatcggtcaggcgggagagtttgactactcaggatcccaggctgtcaaa
gctatgaaggaggaaaacctgcaaacagtgctgattaaccccaacattgcctcggtacag
actaacgaggttggcaccaaacaggcagactctgtgtacttcctgcccgtcactcctgaa
tttgttacggaggtgatcaacgtagagcgacccgacggcatcctgctctccatgggagga
cagacggctctcaactgcggggtggagctttttcagaggggcgtcctgcagaagtatgga
gtgcaagttttgggcacacctgtggagtccatcatggccactgaggaccgccagctcttt
tcagataaactaatggagatcagtgaaaagattgctccaagtattgctgttaaaacggtg
agatatgccttgaaggcagcagatgagattggctatcctgtcatgctgagatcagcttat
gccctgggtggccttggctcgggcctgtgtgctaataaagagaagctagaggacactgct
cgcaaggccctggccatgagcagccagatcttggtggaaaagtcactgctgggctggaag
gaggtggaatatgaggtggtgagagatgttgctgataactgtgtcactgtctgcaatatg
gagaactttgaccctctgggcatccatacaggtgactccatcgtggtcgcacccagccag
actttgtccaatgaggagtaccacatgctgagagagaccgctattaaagtagtacgtcat
ctgggcattgtgggagagtgcaatatccaatatgccctgcatccgtcctctctggagtac
tgtatcattgaggtgaatgcccgcctctccaggagctcagcactggcgtccaaagccaca
gggtatccgctagcatttgtagctgctaaactagcactgggcatcccactgccggacata
aagaacgcagtgtcggagcagaccacggcctgttttgagcccagtttggattacattgtc
accaaaatacctcgctgggatctggaccgcttccacgggatgtctcgagagatcggcagc
gccatgaagagtgttggagaggtcatggcagttggccgaacctttgaggagagcatccag
aaggctttgcggatgtgccacccctcagtggatggctttgtaccacgtctgcctttgaaa
agagcctgggcagaacagcaagaccttcagcaagagatctccctgccttcaagtactcgt
atcttctccctcgcccaggccctgcacagtggtgtgacggttgatcagatccatgacctc
actgccatagacaaatggttcctgcacaaactgaagcacattactgcgatggagcagctc
ctgggtcagtataacagcaccacagtgccaagagatctacttcttaaagccaagatggat
ggtttctcagaccgacaggttggccaggctctgaacgtcacagagggagaagctcgggtg
ctgaggctcaaccagaacatcagaccttgggtcaaacagatcgatacacttgctgctgaa
tatcctgcagccaccaactatttgtattgcacttatcatggtcaggagcatgatttggat
ttcaaggatcatggtaccatgattgtgggttgtggtccgtatcacattggcagcagtgtg
gagtttgactggtgtgccgtgtcaagcattcgtgcccttagacagatgggcaagcgtaca
gtggtggtgaaccataacccggagacggtcagtacggactttgatgagtgtgaccgtctg
tactttgaggagttaaccctggagcgcatcctggacatcacacagcaggagggctgcacc
ggctgtatagtatctgtgggtgggcaaatccccaataacctggctgtgcccttgcaccag
aatggggtgaagattctgggaacgagtcctcttcaaatcgatcgtgcagaggagagatct
gtattctcttccatactggatgatctgggtgtaggccaggccccgtggagggctctcagc
tcgctggaagatgctgtttcttttgctagtagtgtgggctacccttgccttctgcggccg
tcctacgttctaagtggctcagccatgaatgtggtgtacggtgaagacgagatgaaacgt
ttcctggaggaagccacgcaggtgtcacaggatcatcctgtggtcatcaccaaattcgtc
cgaggtgctagagaattggaggtggatgcagtggccagaatgggcaaggttctggcgcac
gctatcacagagcatgttgaggacgcaggagtgcactcgggagatgccacactaatgctg
cccacccagaccatcagccagggagctctggagaaggtgaagactgccacacagaaaatt
gcaaaggcgtttgagatttcagggccatttaacacgcaatttttggtgaaaggcaatgat
gtaatggtgattgagtgtaacctgcgtgcctctcgatctttccctttcgtctctaaaacg
attggtgtggacttcatcgatgtggccaccagggtcatggtgggggagccactagaggag
tctcgtctgccctccctagaaaacccaatcattccagtcgactatgttggcattaaggct
cctatgttttcctggcctcggttgagagaagctgaccctgtcctgcgttgtgagatggcc
tccaccggagaggtggcttgctttggaccgaacatctactctgccttcctgaaggccatg
ctctctacgggattcaagcttccccagaaggggattctcattgggatacaacattcattc
aggcctaacttcctgtccactgctcatcagctgcatgaggagggatttaagctctatgcc
acagagggtacatcagtttggctcaatgctaatgatgttccaacaatccctgttgcttgg
ctgagccatgaaagtaaaaatacaactctacccagcatcagcagactgatcagtgaagga
cacattgacctagtggtcaacttacctaataacaacaccaagttcctcaaagacaacttt
cagatccgcagaatggcggtggattacggagtaccacttatcacaaactttcaggttgta
aagctgtttgcagaagccattaggtattccagcgacttagacgccaccagcctgtttcac
taccgccaacgtgagcccagactgtcgaagagctctgctgcatggttgacttgtaacctg
taa
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