Garra rufa (doctor fish): 141336441
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Entry
141336441 CDS
T11039
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141336441
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
141336441
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_4
zf-CCCH_2
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
141336441
NCBI-ProteinID:
XP_073698182
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Position
6:complement(28924755..28938030)
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AA seq
832 aa
AA seq
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MGLNDHLDDGTGHILKLGLDLDYLHVKATDQQTGTDAGLIMDSGSSDTGYVVTPCTRTCG
SSLQDDSEESAGSDSEPPQCHSHPLVDMLGDGSIHAVHPPHCWSPSLDMDSLVLDMVPKE
SGPVDTLREYQTKMEFALKLGYAEDLVRLVLNKLGSDALINDVLGELVNLGSKPENESGT
QTLSQSTSTSSSFSGTSSSCSFSDSIDSRRSESPSLDDKDNLRPIVIDGSNVAMSHGNKE
MFSCHGIQLTVDWFLERGHRDVTVFVPAWRKEQSRPDALITDQEILRQLEKNKILVFTPS
RRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLAVEKPEWKKFIDERLLMYSFVNDK
FMPPDDPLGRHGPSLENFLRKKPIIPEHKKQPCPYGKKCTYGHKCKFYHPERGTQPQRAV
ADELRASAKNSTVKSVGETGLVKSHSEPGGSRKEKNGDGKRSQPKRQLDASLRALSYSDV
EDKLCSKTKADLYKSNLSLPPAPGGPPSCHGYSQDLKDHKQSQAEPHTNCESPDLYYCMV
RAYSGLSLPSRSSPERNFLSDADPQTSSVASDCSSDGSMSSDSYGMATHNEHSCLSSPDL
LLDEGIKCHHHHHHRRNYQLPSVIPPGFIHSPATSNHVGFHHSIPRVHSFALEDQQDPHF
QHSISYMSPQRQQVVGSRSSYPGDYPSLCQSNTHSQNSPLSRGLASTRVDSVSDSRLYEH
SPLLPRKPYLSQERKTSWDPYYRQHPQPCYEQVSFQDLSKNREQMWRMPWGCSSAPPPPH
LRYQEVREKVFTNLCNIFPTELVQLVMGRYPHVTDAQQLAAAILAEKNHAGY
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaacgaccatctggatgatggaacaggccacatcctcaaactggggctggat
ctagactaccttcatgtgaaggctacagaccagcagactggcactgacgccggacttatc
atggacagtggttcatccgacacaggttacgttgtgaccccctgtactaggacctgtggt
tcttctctgcaagatgactcagaggaaagtgcagggtcagacagtgagcctccacagtgc
cacagtcatcctcttgtcgatatgcttggtgatgggtccatccatgcagtccacccacca
cactgttggtctccaagtctggatatggattcactggttctggatatggtacccaaagag
tcaggccctgtggatacactcagggaataccagacaaagatggagtttgcccttaagctt
ggctatgcagaagacttggttcggctggttctgaacaaactagggtcagacgcgctgatc
aatgatgttcttggggagctggtaaacctgggcagtaagccggaaaatgagagtgggaca
cagactctctcccagtccacttccacatcatcatcattctctggcacatcatcttcctgc
agtttctctgactcaattgactctcgcagatcagagtccccttctttggatgataaggat
aatctccgccccattgttattgatggcagcaatgtggccatgagccatggcaataaggag
atgttttcctgtcatggcattcagctcacagttgactggtttcttgaacgtggccataga
gatgttacagtttttgtgccagcctggaggaaagaacagtcccgtcctgatgctcttatc
acagatcaggagatcttgagacagctggaaaagaataagattcttgttttcacaccttca
cgtcgtgtccagggccgcagagtagtctgctatgatgacaggtttattgttaagctagct
tatgaatcagatggcatcattgtctccaatgacaactacagagacttggctgttgagaaa
ccggaatggaaaaagtttattgatgaacgtcttctgatgtactcctttgtaaatgataag
tttatgccacctgatgatccattgggtcgacatgggccaagtctggagaattttcttaga
aaaaaacccatcattccagagcataagaaacagccctgtccatatggaaagaaatgtacc
tatgggcacaagtgtaaattttatcatccagagcgtggtacacagccacagcgagcggtg
gcagatgaactccgtgccagtgccaagaactccacagttaaaagcgtgggagagacgggt
ctcgtgaaaagccacagtgagcctggaggctcccgtaaagaaaaaaacggtgacggtaaa
cgatctcagccaaagaggcaattggacgccagtctacgtgccctgtcttacagtgatgtg
gaggataagctgtgttccaaaactaaagcagatctgtataagagcaacctatctctgcct
ccagctccaggaggtcctccttcctgccatgggtatagccaggacttgaaggatcacaag
cagtctcaggcagaacctcacacaaactgtgaatctcctgatctttattactgcatggtt
agggcatattctggcctaagcctgccctctcgcagcagtccagagcgtaacttcctgtct
gatgctgatccacagaccagctcagtggcatcagattgcagcagtgatggcagcatgagc
tcagattcttatggcatggcaacccacaatgagcattcttgcttaagctctcctgatttg
ttactggatgaaggaatcaagtgtcatcaccaccatcatcatcgtagaaattaccagtta
ccctctgttattcctccagggttcattcactctcctgctacatctaaccatgtaggattc
caccacagcatacctcgtgttcatagttttgctctagaggaccagcaagacccccatttc
cagcactctatctcctacatgtctcctcagcgccaacaagtggtaggttcccgctcaagc
tatcctggagattatccttctctctgccagagcaacactcactcccagaactctccactg
agtcggggccttgcctcaacacgtgtggacagtgtgtcagactccaggctttatgaacac
tctccattgctgcctagaaaaccctacctatcccaagagcgaaagaccagctgggatcca
tattatagacagcacccacaaccatgctacgagcaagtcagcttccaggatctttcaaag
aaccgtgaacagatgtggcggatgccctggggctgttcttctgctcctcctccaccccat
cttcgttaccaggaagtacgagagaaagtgtttaccaacctgtgcaacatttttcccaca
gagctagtgcagttggtcatggggcggtaccctcatgtgaccgatgcccagcagctggca
gcagccatcttggcagaaaagaatcatgctggatactaa
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