Garra rufa (doctor fish): 141336506
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Entry
141336506 CDS
T11039
Symbol
sorcs1
Name
(RefSeq) VPS10 domain-containing receptor SorCS1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141336506 (sorcs1)
Membrane trafficking [BR:
grf04131
]
Protein recycling
Others
Others
141336506 (sorcs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
APC1_3rd
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
141336506
NCBI-ProteinID:
XP_073698267
LinkDB
All DBs
Position
6:12107519..12360581
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AA seq
1240 aa
AA seq
DB search
MERGIRYCRVNAFCTLILVLFAWVPVTKTVITCRSCHLLDKWSGRELLVRMDSGVDFGKV
SDKNGDGSTALFNSVGAETGQPDCGATDNCEHAHSVRKRNTDRLRSETMPPDDKWKSMRS
NGKVYNLKRPSSQGSAPGEPHHRVRRSTQGPGSPPGAHSPPAFGNSTARAARRVPRSDLR
WNREERRTATSRQEELKLTSSTFALTGDSAHNQAMVHWSGQNSSVILMLTKLYDFNLGSV
TESSLWRSTDYGTTYEKLNEKVGVKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSDEG
ATYQKYRLNFYILSLLFHPEQEDWILAYGHDQKLYSSVEFGRRWQLVHERVAPNRFYWSK
MGLDKEPGLIHLETSISETQALYVTCKLQNCTDANKGKPFPGYIDPNSLVVQDEYVFVQV
STAGRPIYYVSSRRDVFTPMKLPEYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLYVSE
AGGIYYTLALENVMSSMGPEGNVMIDLYEVAGIKGMFLANKKLNNEVKTYITYNKGRDWR
LLQAPSADLRGNRIHCMLPYCSLHLHLHVSANPYTSGNIASRESAPGIIVASGSIGAELT
SSNVSMFITSDAGNTWRQIFDEEYSVLYLDQGGALVAIRHTPLPIRHLWLSFDEGRVWNK
YSFTSSPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCIESDYVPWD
LHDQGERCLMGVKRVYRKLKAIARCVMGKTYSVTMMSEPCDCTASDFECDYGFERRADGK
CTPAFWFLPSSMSRTCTTEHTFLNSTGYRKVVSNNCTGGVMEQYTARRQLCPSQAPRGLH
LVTSEGKLTATLASNVTFLVFLEEGDGSKTSITVDFGDGNAFTYSNVSSIEDGIKHIYKN
VGIYRVSATAENSLGSETVLLFLHITCQLESIHLSAPFVAVKNKEVNLTVVLSPSQVGTV
TYIWWLGNNSEPVITLEGSVAFTFSREGISVVTVQVSAGNTILQDRKTIAVHEYFRSHLL
AFSSNLDDHNPDVAEWRLDVSRVIKTSMVQATGVNPEQLLVTVLPGLPTAAEFFLLPDKQ
LTEGKPDKTATHLDQLSELVLSALNQNLVQFTLRPGVQITVYAAHLSAAPLVDTSENHSG
SAMLMLLSVVVVGLAVFLIYKFKRKIPGLHVYAAMQDEKEQEMIQSPVSPTDSTPSCSSQ
RELLTSLEPLDTEPNTQTIECIKPHPRVKFSSDLPTYIDV
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggagagaggaatcagatattgccgggttaatgctttctgcaccttgattttggttttg
ttcgcttgggttccggtgaccaaaacagtgataacttgcaggtcatgtcacctgctggat
aagtggagcggtagggaattactggtgaggatggacagtggtgtcgattttggtaaagtt
agtgacaaaaatggagacgggtcaacggcgctgtttaattcggttggtgctgaaactggt
caacccgactgcggcgcaaccgacaactgcgaacacgctcactccgtgcgtaaaaggaat
acagacaggctccgctcagagacaatgcctcccgatgataaatggaagtcgatgcgcagc
aacggcaaagtttataacctcaaacgtccaagttcacaaggttcagcccccggagagccc
catcaccgagtgcgtagaagcacccaaggacccggctcgcccccaggtgcgcactcgccg
ccggcttttggcaacagcaccgcgcgggctgcgcggagagtcccccgctctgatctgaga
tggaacagggaagagcggagaacggccacatcgcgacaggaggagctgaaacttaccagc
tctacctttgcgctgacaggggattccgctcacaaccaagccatggtgcactggtccggc
caaaacagcagcgtgattctcatgctgaccaaactgtatgacttcaatctgggcagtgtc
acagagagctccttatggaggtcaacagattatggaaccacttatgagaaactcaatgaa
aaggtgggcgtgaagaccatcctcagctatctatacgtcagccccaacaacaagcgcaag
atcatgctgctgacagatcccgaggtggaaagcagtttgctcatcagctcagatgaaggc
gccacctatcaaaaatatcgcctcaacttctacatcctcagcctgttgtttcaccctgag
caggaggactggatccttgcctacggccatgaccagaagctctacagctctgttgagttt
ggccgtcgatggcagctcgttcacgagcgggtggcgcccaatcgattctactggtctaaa
atgggccttgataaagagccgggcctgattcaccttgagaccagcatctcagaaacccag
gctctttatgtcacgtgcaagcttcagaactgcacagatgccaacaagggtaaacctttt
cctgggtacattgaccccaactcactggtggtccaggatgagtatgtgtttgtccaggtg
tcaaccgctggtcggccaatctactacgtgtcatccaggcgagatgtgtttacacccatg
aagcttcccgaatacacccttccaaaggatctgcatgtgatcagtacagatgagaaccgg
gtcgtggcggcagttcaagagtggaaccagaatgacacttacaacctgtatgtgtcagag
gccggaggcatttactacacgctggctttggagaacgtcatgagcagtatgggaccagag
ggaaatgtcatgatagatctgtatgaggtggcaggaataaaaggcatgttcttggccaat
aagaagctaaataatgaggtgaagacatacataacctataacaaaggccgcgactggagg
ctcctgcaggctccctcggccgatctcagaggaaacagaatccattgcatgctgccgtac
tgctccctgcatcttcacctgcacgtatctgcaaacccgtacacatccggaaatatcgcc
agcagagagtcggcccctggaatcatagtggcgtcaggttcaatcggcgcagagttaacg
agcagcaacgttagcatgttcatcacatccgacgctggaaacacgtggcggcagatattt
gacgaagagtacagcgtgctgtatctggatcaaggtggagctttggtagcaattagacac
acccctcttcccatcaggcacctctggttgagctttgatgaagggagagtgtggaacaaa
tatagtttcacttcatcgcccctgttcgtggatggggtcttgggcgaaccgggcgaggaa
acgcttataatgacgatcttcggtcatgtcagtcaccgctcagaatggcagctggtaaag
atagacttcaggtctatctttaacagaagatgcatcgagtctgactatgtgccgtgggat
ttacatgaccagggtgaacgctgcctcatgggagtcaaaagagtctaccgaaagctgaaa
gccatagcgaggtgtgttatgggtaaaacttactctgtcacgatgatgtccgaaccatgt
gactgcactgcgtccgactttgagtgtgattatggctttgagagaagggctgatgggaaa
tgtactccagcattctggttcctcccctcctccatgtctcggacctgtactacagaacac
accttcctcaatagcactgggtacagaaaggtggtgtctaataactgcaccggtggggtg
atggagcagtacacggctcgtagacagctgtgcccaagccaggccccccgcggcctccac
ttagtgaccagcgaagggaagctaaccgctactcttgccagcaacgtcaccttcctcgta
ttcctggaggagggtgatggatcgaaaaccagcatcacggtagatttcggagacggaaat
gctttcacctactccaacgtgagctctatcgaggacggcattaaacacatctacaagaac
gtgggaatctaccgagtgtcagccacggcggagaacagtctgggctctgaaacggtgctc
ctcttcctacacattacgtgtcagctggagtctattcacctctctgccccttttgtcgct
gtgaaaaataaagaagtcaatctgacggtggttctctcgccaagccaagtgggaacggtc
acctatatctggtggcttgggaacaattctgagcccgtgatcacgctggaggggagtgta
gcgttcacgttctctcgagagggaatcagcgttgtcactgtacaggtgtccgctgggaat
accatcctgcaagacaggaaaaccatcgctgtccacgaatacttcagatctcatcttctt
gccttttcatctaatcttgatgatcacaaccctgatgtggctgaatggaggcttgatgtg
agtcgagtcattaaaacctctatggtgcaggcgacaggagtgaatccagagcagctgttg
gtcactgtgttgcctggactgcccaccgcagccgagttcttcctgttaccagacaaacag
ctgacagaaggaaaaccagacaaaacagccacccatttagaccagctctcagaactggtt
ctcagcgctctgaatcagaatctggttcagttcacactcagaccaggagtccagattaca
gtatacgctgcacatttatcagcagcgcctctagtggacacaagcgagaatcacagcggc
tcagctatgctcatgctcctctctgtggtggtggtgggtttagccgtgttcctcatctat
aaatttaaaaggaagatcccaggcctccacgtctatgcagcgatgcaggacgaaaaagag
caagaaatgatccagagtccagtttctcccactgacagcacacccagctgcagctctcag
agagaactgctcacatcactggagcctctggacacagagcccaacacccagaccatcgaa
tgcatcaaacctcatccacgtgtcaaattctcatcagatcttcctacatacatcgacgtt
tga
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