Garra rufa (doctor fish): 141336602
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Entry
141336602 CDS
T11039
Symbol
prom1b
Name
(RefSeq) prominin 1 b isoform X1
KO
K06532
prominin 1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
grf04147
]
141336602 (prom1b)
04090 CD molecules [BR:
grf04090
]
141336602 (prom1b)
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
141336602 (prom1b)
CD molecules [BR:
grf04090
]
Proteins
141336602 (prom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
COG5_N
Ycf9
Zn_ribbon_Top1
Motif
Other DBs
NCBI-GeneID:
141336602
NCBI-ProteinID:
XP_073698398
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Position
6:35371783..35420329
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AA seq
864 aa
AA seq
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MDMWWKVGLVLVMCSGLTSSEAREEYRDSSPRNAMLRAPVETLDFGFVPSVVYETHAYYE
PGPIGILFHMVHAFLYVVQPNPFPKDLIVKMVQQNMGGIKGDDYKKPENVVLLLQGIYYE
LGFIVLSVLGVIFVLLMPIVGLFFCVCRCCENCGGEMHQRQKKNGDCLRGFYMATLIATS
VFLTVGVTVAYAANQNITNQIKSTRRLVSTNIRDLKSFANYTPTQIDYLSAQYTTAKNKV
LSDLDNIGTLLGGQIHNQLEREVMPALDNALRVTAVKVEGAIKAMRETKESLESVTTSLE
ILQEGTGRLQNSLQSERVSLSNTLNDPACSNGDVTHTCNTIRGTLSQIALSANFHGLPDV
EAPLANLDAVLKTDLSNIVQKGYTSFNDTSRMVSEQTREIVSEVKGLLDRSGQEIIGFTR
MFPIEPALENFTKFLTDSQKNIEAFYPQIDQLDFYRWIGCVVICCMVVLVLTFNFLGLLC
GSCGYDKNATPTTRGCLSNTGGNLLMASVGFSFIFSWVLMGVVVTTFVVGGNIEKLMCEP
LANRQIFKIIDTPYMVHPAKKNFLPAMLFQDPNIDLTIGSMYRDCYDNNGLYSALQLETK
FNFNRFLNATVYNPELNKIFNSVNVDLQGMVLLEQEGKDNLIDFANTGVGDIDYQAYLTE
VNKGVTVVDLLSYANELEAQADQLPRGALENALKGHASSIRQIHKDQVVPMEQAMKFVKA
RGTLSQSIKLLQKTSRELPIKVTNVLNAIEAAEYLIANNASNVVKQETDKFIKKIVGYFS
QYTEWAKHSLEMEVAQCKPISNIIDSLEIVACSFIVDSVNTFWFGLGGCCLLLIPSIIMS
VKLAKFYRRMDTEDVYDDGTENWS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggacatgtggtggaaagtggggctcgtgctggtgatgtgctcgggtcttacgagcagc
gaagcccgagaggagtaccgggattcgtctccgcgcaacgcgatgctcagagcgccagta
gaaacattggactttggcttcgtgccgtctgtggtgtacgaaacgcacgcgtattatgaa
ccgggtcccatcggtattcttttccacatggtccacgcgtttctctacgtggttcaaccc
aatcctttccccaaagatctcattgttaaaatggtccagcagaacatgggaggaatcaaa
ggggatgattacaaaaagccagagaatgttgtattattactacagggtatctactatgag
cttggcttcatagtcctgtcagtactgggggtgatatttgtgctgttaatgccgatagtg
ggtctgtttttctgtgtgtgccgctgctgtgaaaactgtgggggtgagatgcatcagaga
cagaagaagaacggcgactgcctacgaggattctacatggccacactcatcgctacctct
gtcttcctcacagtgggagtgacggtcgcctatgcagcaaatcagaacatcacaaatcag
atcaagagcaccagacgcttagtcagcactaacataagagacctgaaatcttttgccaac
tacacaccaacgcaaatagactacctctctgcacagtacacaacagccaagaacaaagta
ttatcagatttagacaatattggaactctgctgggtggacagattcataatcagctggaa
agagaagtgatgcctgcattagacaatgctcttcgcgtgacagcagttaaagtggagggt
gctattaaagccatgcgggagaccaaagaatcattagagagtgtgaccacatcactggag
atcctgcaggaagggacaggcagactccagaactctcttcagtctgaacgtgtgtctctc
tcaaacacactcaacgacccggcctgctctaatggagatgtaacacacacctgcaacacc
atccgcggaacactcagccagatcgctctcagcgcaaacttccatgggttacctgatgtt
gaggcgcctttggccaatctggatgctgtgcttaaaacagacctcagcaatattgtacag
aagggctatacttcttttaacgacacatcaaggatggtcagcgaacagacgagagaaatt
gtgtcggaagttaaagggctgctggataggtctggtcaagagataattggtttcacaagg
atgttcccgatagaaccagcacttgagaactttacaaagttcctgacggacagccagaag
aacattgaagcgttctatccacagatcgaccagctggacttctacagatggataggatgt
gtggtgatttgctgtatggttgtgctggttctgacctttaatttcctgggcctgctgtgt
ggatcatgtggctatgataaaaatgctacacccaccacacgtggctgtctgtccaacact
ggaggaaacctactgatggcgtctgttggcttcagcttcatcttctcctgggtgctcatg
ggagtcgtagtcaccacatttgttgttgggggaaacatagagaagcttatgtgtgagcca
ctggcaaacagacagatttttaagatcattgacacaccatatatggtccatcctgccaaa
aagaacttcctgcctgctatgctgtttcaagatccaaacatcgaccttactattggcagt
atgtacagagattgttatgataataatggtttatattctgcactacaactggagaccaag
ttcaacttcaacaggtttctcaatgccacagtgtataacccagaactgaacaagatattt
aacagtgtgaatgtggatctccaagggatggttcttctggaacaggagggcaaagataac
ctcattgactttgccaacacaggcgttggagacatagactatcaggcttatctaactgag
gtgaataaaggagtgacagttgtggatcttttgtcctacgcaaatgaacttgaagctcaa
gcagaccaactgccacgcggggctcttgagaacgcacttaagggtcatgccagcagtata
agacaaatccacaaagaccaagtggtgccaatggaacaggctatgaaatttgtgaaagca
aggggcactctaagtcaaagcattaaactgcttcagaaaacttctagagaactgcctatt
aaagtgacaaatgttttgaatgccatcgaggcagcagagtacctcatcgccaacaatgcc
tcaaatgtggtcaaacaggagactgataaattcattaagaagattgtgggatatttttca
caatatacagaatgggccaagcactctctggaaatggaggtcgcccagtgcaagcccatc
agcaacatcatagactcgctagagatcgtagcctgcagcttcattgttgactcagtgaac
actttctggtttggtctgggaggatgctgtttgttactcattcccagcatcatcatgtcg
gtaaaactcgccaaattctaccgcaggatggacaccgaggacgtctatgatgatggtact
gaaaactggagctaa
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