Garra rufa (doctor fish): 141336697
Help
Entry
141336697 CDS
T11039
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
grf Garra rufa (doctor fish)
Pathway
grf03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
141336697 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
141336697 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
PCB_OB
Motif
Other DBs
NCBI-GeneID:
141336697
NCBI-ProteinID:
XP_073698516
LinkDB
All DBs
Position
6:7892129..7899068
Genome browser
AA seq
194 aa
AA seq
DB search
MSPMKLCVPGERLCSTEDCIPGTGTYLRHGYIFASLAGYVLRKNEGEELPVISVVRETEA
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRREDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHAKE
FRKVARVQPEYLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccaggtgaaaggctctgcagcacggaggactgtatc
cctggtaccggcacgtatctgcggcacggctacatcttcgcttcgctcgcaggatacgtg
ctgagaaagaacgagggagaggagctcccggtgatttcagtcgttagagagacagaagca
cagcttttgcctgatgtcggtgccatcgtcacctgtaaggtgacaagtatcaacccacgg
tttgctaaagtccacatcttatatgtggggtcgacaccgctgaaagacaggtttagaggc
acgatcagaagagaagacgtgagagcgacagagaaagataaggtggagacgtacaaaagc
ttcaggccaggcgacattgtccttgcaaaagtgatctctttgggtgatgtgcagtcgaac
tacctgctgaccacagcggagaacgagttgggcgtagtcgtggcccacagcgaggcgggc
gctcagatggtgcccatcagctggtgtgagatgcagtgtccacgcacacacgccaaagag
tttcgcaaggtcgcgcgggtacagccggagtacctgcaggcctga
DBGET
integrated database retrieval system
