Garra rufa (doctor fish): 141337007
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Entry
141337007 CDS
T11039
Symbol
nup133
Name
(RefSeq) nuclear pore complex protein Nup133
KO
K14300
nuclear pore complex protein Nup133
Organism
grf Garra rufa (doctor fish)
Pathway
grf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141337007 (nup133)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141337007 (nup133)
03036 Chromosome and associated proteins [BR:
grf03036
]
141337007 (nup133)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141337007 (nup133)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
141337007 (nup133)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
141337007
NCBI-ProteinID:
XP_073698829
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All DBs
Position
6:complement(8540437..8555217)
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AA seq
1136 aa
AA seq
DB search
MFTPRGTPSSGRRQTPRTGGRKSVSGVQSGLLFSPRRSAVTARSTPTRVQSHAAVDSYHF
DVQTFGSSLPVKVMEALTMADVDDQISVKVEESGWAWMVCGERLIIWKVSQMSVAKLSVC
KDLQLPSSEFAYSADLISITSSNPLHSAPIQSISALAVSPDGSARFWPSLAHDGTYTETP
LDLSGNVCNYVAAVKGGSFIVSSYRGHLLRLTPDSSGKLYQRPVQQGQGMLSGIGRRVSS
LFGIRGQPADLTVFSVLWVKQTSCLYSLSSCGLSKWEVDENSEMQVLSWSTNQIITDSIT
DAIWDSESNYSEIKNGVNVSYLDMQYSRAGLVVLAAAWHPGDTPCVAYFCLVTLAESTAP
SPDLLTVEVTKYNPPFLSEEELQKTRLVLPDPSSPAAYLYNEELVFTCSTVAGRGGLAEE
KISFSSPGDRIRGGGVCAGLPVFFSQNSGLVAVLQRESASLLPETMEDSLCTSVAGPGPE
GTPLETPPKIDMVAQEDRTKLLKQAFLQFCRHDLVGAQSMVDELFPSDGEGDAELDAIVT
QIDLDLVDDFPACDPRWAESVPEEGAGFTLTSLILLHQLEDKMKAHRCLMDFLLQTGLLD
RLTSTTVRRSPMATRLLLCEHAEKLSAAIVLKNHHAKHQELVNAAILSALKKNNTDIPTT
LTPADVFFREVSQISSIFECLLDEEEKALKEHSDAAQWAEVVLNVNDIVKDMLQAAAQYR
ETKASLYRAPENCGPEPEYIPWTASGGVGGVRTVITRQHELILRAAYPHGDLELRGMLSE
QLVALLDSLLSGYVAQLTSLRRAGQQERYITLDNEYTQKRSELLTPLLELGQHQWVAALA
EKYCDFDILVQLCERTDNQSRLQQYMVKFADQNFADFLFRWYMEKGKRGKLLSQPVATHQ
QLASFLQAHDHLSWLHDIHVQDFQRAHRTLDSQAKMETRYFSRKKTLLALSKLTALASDM
PKEVHCRQLNDIVEQERFLLHQETLPKQLLDEKQLNPDSMPLLSPRNLIDLYICNENRGA
NEYDFKKALDLLEYLEEEDAADIDSLKREIFSKALKKDWKESWSSSDDNDNPLEAARDST
FVKILQKLIQEGVSLQSYLPDVKDLLQEDELESLKSKPYFEFLLRANYEHYLKAQI
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgtttactccccggggcacaccgagctcaggccgcagacagacgccacggaccggcggt
cggaagagtgtgagtggcgttcagtccgggctgctgttctctccacgccgctccgctgtc
actgccagatccactcccacccgagttcagagtcatgcagccgtcgattcgtatcatttt
gacgttcagactttcggatcatctctgcctgtcaaagtcatggaagcgctgaccatggcc
gacgtggatgatcagatctctgtgaaggtggaggagtccggttgggcgtggatggtttgt
ggcgaacggctgatcatctggaaggtgtctcagatgtctgtggcaaagctgtcagtgtgt
aaagacctccagctgccctccagtgagtttgcatacagcgctgatctcatctccatcact
tcctccaatccactccattctgcacccatacagtccatcagtgcattggccgtgtctcca
gacggttcagctcggttttggcctagtctggctcacgacgggacttacactgagacgcct
ctggatctgagtggaaatgtgtgcaactatgtcgcagctgttaagggtggaagtttcatc
gtgtcatcgtatcgtggtcacctgctccggctcactccggattcctctggtaaactgtac
cagagaccggttcagcagggtcaggggatgctgtctggcatcggacgcagggtttccagc
ttattcggcatccgtggccaaccggccgacctcacggtgttcagtgtgttgtgggtgaag
cagaccagctgtctgtattctctcagctcatgtggcctcagtaaatgggaggtggatgaa
aacagtgagatgcaggtgttgagctggagcaccaatcagatcatcacagacagcatcact
gatgccatctgggactcagaaagtaactactctgagatcaagaatggagtgaatgtctca
tatctggacatgcagtacagcagagcggggctggtggtgttggcagcagcgtggcatcca
ggcgacacaccatgtgtggcatatttctgcctggtcactcttgcagaaagcacagcgccg
tccccagacctgctcactgtggaggtcaccaaatacaacccgcccttcctgagtgaggag
gagctgcagaagacgcgtttagtgttgcctgatccgtcgagtcctgcggcgtacctctat
aatgaggagctggtgttcacctgcagcactgtagctggacgcggaggtctcgcagaggag
aagatctccttcagctctccaggtgaccgtatccgaggcggtggggtgtgcgctggtctg
ccggtgtttttctctcagaacagcgggctggttgccgttttacagagagaaagcgcttcc
cttctacctgagaccatggaggactcgctctgcacctcagtggccggacctggacctgag
ggcactccattagagacgccacctaaaatagacatggtggcccaggaggacagaactaaa
ctgctgaagcaagccttcctacagttctgccgtcatgatctggttggagctcagagcatg
gtggatgagctcttccccagcgatggagagggagatgcagagctggatgccattgtgacc
cagattgacctggatctggtggacgacttccctgcatgtgacccacgctgggctgagtct
gttcctgaagagggcgctgggtttacactgacatctctgatcctgctgcatcagttggag
gataagatgaaagctcaccgctgcctcatggacttcctgcttcagacaggtctcctggac
cgcctcacttccacaacagtgcgcaggtccccgatggccactcgactcttgctatgcgaa
catgcggagaagctctcggctgccatcgtgctgaagaaccatcatgccaagcatcaagag
ctggtgaatgcggccatcctgtcagctttgaaaaaaaacaacactgacataccaaccacc
ctcacgcctgcggatgtgttcttcagagaggtgtctcagatctcctctatctttgagtgt
ctgttggacgaggaggaaaaagctttaaaagagcattcggatgctgcccagtgggccgag
gtggtgctcaacgtcaatgacatagtcaaggacatgcttcaagcagcagcacagtaccga
gagaccaaagcatctctgtacagagcgccagagaactgcggtcctgagcctgagtacatc
ccatggacagcctcaggaggagtaggtggagtgcggaccgtcatcacacggcagcatgag
ctgatcctgcgcgcggcgtatcctcacggagacctggagttgcgcggcatgctgagcgag
cagctggtggcgctgttggactctctgttgagcggttacgtggctcagctgacgtctctc
cggcgagccggacaacaggagcgctacatcacactggataatgaatacacgcagaaacgc
tcagagctgctcacacctctcctggagttgggtcagcatcagtgggtcgcggcgctggcg
gagaaatactgtgactttgacatattggtgcagttgtgcgagaggacagataaccagagt
cgactacagcagtacatggtcaaattcgctgatcagaactttgctgacttcctgttccgc
tggtacatggagaaaggcaagagagggaagctgctgtctcagccagtagcaacacaccag
caactggccagtttcctgcaggctcacgatcacctcagctggctgcatgacatacatgtg
caggactttcagagagcccatcgtaccctggacagtcaagccaaaatggaaactcggtac
ttcagcaggaaaaagaccctactggccctcagcaaactcacagctctcgcgtcggacatg
cctaaagaagtgcattgcagacagctcaatgacatagtggagcaagagaggtttctgctt
catcaggagactcttcctaaacagctgctggatgagaagcagctgaacccagacagcatg
cctttactcagccctcgtaacctcattgatctttacatctgcaacgagaaccgtggagcc
aacgagtacgacttcaagaaagctcttgatctgctggagtacttggaggaggaggacgca
gctgatattgattccttaaaacgagagatcttcagtaaagccttaaagaaagactggaaa
gagagttggtcgtcgtctgatgataatgacaatcctctagaagcagccagagacagcact
ttcgtcaagatcctacagaaactcattcaggaaggtgtttctctgcagtcgtacctgcct
gatgtgaaggatctcctgcaggaagacgagctggagagtctcaaatcaaagccgtacttt
gaattcctcctgcgagccaattacgagcactacctgaaagctcagatatga
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