Garra rufa (doctor fish): 141337234
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Entry
141337234 CDS
T11039
Name
(RefSeq) multiple PDZ domain protein
KO
K06095
multiple PDZ domain protein
Organism
grf Garra rufa (doctor fish)
Pathway
grf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
141337234
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
TetR_C_11
Motif
Other DBs
NCBI-GeneID:
141337234
NCBI-ProteinID:
XP_073699113
LinkDB
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Position
6:complement(34796163..34869502)
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AA seq
1889 aa
AA seq
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MMDTQRALLAVERLQERLKKRGELPAEEKLSLLKSVLQSPLFHQILVMQETGQHHQQQQV
SPRTPPSQSMSDDGDGVSTSHPSCNLRYRDSYLSAQRRNDRCRSFNHVTFAPFITEDVLV
LQSMAQGRTVLSFDLEKGESALGISIIGLETESSGGHGIFIQTIQPDSVAHSDGRLHEGD
QILSVNGKLFESSVTQEQAVQVLEEASSVVTLIIAREPTPSFSTLQKSHTFPKNLSGIYR
QFSPRQIHHIELENDGSGLGFGIIGGRSTGTMVKTILPHGVAGRDGRLRSGDLLLRIGDV
DVSTMGSEEVARELRLAGSHVRLIIARETTDGDLSPTIAQQQDTQKKQDLEGKNEKQFSV
RFNNNKNGLGVNISKSLDNLNKESSGFEVKSILKGNAVDQDGQIHIFAVDGQSPYDCSKQ
KAKEMHMTGQQVEISIWRKGSPSGTQTTATMSQRPLTPLGLLPPPLPPCLPEPKPVLPPG
KVFFTERRDLNFNFNRECICKLSDEEEEILKVKWQSKLGPQYEVMVAQVQKFTESSGLGV
SLEAKEGHHYICSILPEGPIGQTGIIRPGDELLEVNRFPLIGETHKEVVSLLKELPVNVC
VVCSRLIPPTVSEEDDDDGDDVQLTLKELLAEFHEKAEQNSFGGLFARREDEWKTEAPVL
SHQAMWENEIQVYELQKGDSGLGFSILDYQDPMNPGRTVIVIRSLVAGGLAERDGRLLPG
DRLMFVNGTDLSHASLAQAVHVLKSTALGTVRIGVTKPLPENDIQDTGDDITGNSHSENN
NQHSTLQTNSHSQNSKMEADAKHVSSPSSGYERTITIVRGNSSLGMTVSSLRDGSGMIIR
SVVHGGSISKDGRLAVGDGIVAINGESTTNLSNAQARAMLRRHSLIGPDLSVTYVPAAVL
DMHRANYTQSKEEMEKHTTTTVQSKHSQNLPFKPLECISEQQSTVDGKGVNGKTQAEEEN
ERLDNHNQIKQRESTESLEREQKVKNERTVPQNENGQRQGREKDRRTDEEETHGKDRSSW
SQPRRVTLFRAGGTCLGFSVVGGRGMGSRLSNGEMRRGIFIKHIAEDSPAARNSTLKEGD
RILQVQGVDVSDFTHEETVEAIRRAGDKVELLVQSPQFSAPGNCSEDDSVSKSNSQNHQE
PEIPNNSPSYPFSPIPFKRTEDWKLGKPPLLKLPSRQVDTETDGVQRVPERPPLPEEASH
QHSELEQEQASYWSRMQQRYGSLPGELHMFDLDCGSHSSGLGLCLSGNRDEARGRMSVYV
LEIKPDGAAAADGRVRVGDELLEINGQVLYGRSHQNATAIINNVRAKVRILLTRNKATEN
QMTEGPVKEMDNCPVVSPAMPINIIREAQHLALSQDGRISREDKLKSCSSENLNIGLPAP
INATSNHKPSCHPASHMSPSYCTPPSSGISSADENIHCGSTVDQSSCTTGPHSTSYLTQC
SVGSDPLTCPIIPGCINTIDICKGTTGLGLSIVGGCNTVLGVIVIHEVNKDGAAHRDGRL
WAGDHILEVNGIDLRMATHEEALSVLRLSPQRVQLCIYRDSVTENHSTHTLQNHTPEDMW
DLFSVELNLKTGQGPGLRIVGKRNDTGIFVSEITRGGAADLDGRLLLGDQILSVNGEDIR
AASQDYASALLQRCSGSVLLEVARFKASSHYSYGDQVGEMDVPLLSSLSALDSVDENVDI
RTVTIQKHECESVELRLRGTQGDGMICISNLDPTTPAARAGLLQLGARVISINGTSTERL
SVIEASTLLRDSSGAVTLQVMPSGCADGASKDRSPLIHSSPGLSENYNTHNHQSSPQFQT
ITLERGSAGLGFSIVGGFGSSHGDLPIYVKNIFPKGAAVEDGRLRRGDQLLTVNGQSLDG
VTQSEAVELLRQTSGTVTLQVLSKRLPTC
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atgatggacacacagcgtgctttgctggcggtggagcggctgcaggagaggctgaagaag
aggggagaacttcctgctgaggagaaactcagtctgctcaagagtgtcttacaaagtcct
ctgtttcaccagatactcgtcatgcaagagactggacaacatcatcagcaacaacaggtt
tcccccagaacgcctccctctcagtctatgagtgatgatggagatggtgtgagcacatcc
cacccctcatgcaatctgaggtacagagactcctacctctcagcccagcggcgcaatgac
cgatgtcgatccttcaatcatgtgacttttgcccctttcatcacagaggacgttttagtg
ctgcagtccatggcccagggtcgaactgtgctcagctttgacctggagaagggcgaaagt
gctttaggcatcagcattattggtctggagactgaaagcagtggaggacatggtatcttc
atacagacgattcagccggactctgtagcacacagtgatggacgtctgcatgagggtgat
cagattctctcagtgaatggcaagctgtttgaatcctctgtaacacaggaacaagctgtc
caggttcttgaggaagcatcttctgtggtaaccttaattatagccagagaaccaacccca
tcattcagcaccctacagaagagccacacttttcccaaaaacctctccggcatttatcgt
caattcagtcctaggcaaattcatcatattgagttggagaatgacggatcgggtctaggc
tttggcatcattggaggaaggagtactggcaccatggttaaaaccattcttcctcatggt
gtagctggaagggatgggagattacgtagtggtgatcttctcctcagaattggtgatgtg
gacgtgtccaccatggggagtgaggaggtagcacgtgagctccgtcttgctggttcccat
gtaagacttatcattgccagggaaaccactgatggtgacctctcacctaccattgcccag
caacaggacactcaaaagaaacaggatttagaagggaaaaatgaaaaacaattcagtgtc
agattcaataacaacaaaaatggcttgggcgtcaacatctccaaatctctggataacctg
aacaaagaatccagtggatttgaagtaaagagcatactgaaaggaaatgcagtggatcag
gatggacaaattcacatctttgctgtggatggtcagagtccgtatgactgcagtaaacag
aaagcgaaggagatgcacatgactggccaacaagtggagatctctatttggagaaagggc
tcaccatctggaacgcaaacaaccgccacaatgtcccaaagacccttaacccctctgggt
ctccttccccctccactgcctccatgcctaccagagccaaaaccagttctgcccccaggg
aaagttttctttactgaacgccgggacctcaacttcaacttcaacagagagtgcatttgc
aagctgtctgatgaagaggaggaaatattgaaggtgaagtggcaaagcaaactgggtcct
caatatgaagtcatggtggcccaggtacagaaattcactgagagtagcggtcttggagtg
agtttggaggctaaggaaggtcatcactatatctgctctatactgccagagggtccaatt
ggacagaccggaatcatacgacctggagacgaactgctagaggtgaaccggttccctctg
attggtgagacacataaggaagttgtgagcttgctgaaggagcttcctgtgaatgtttgt
gtggtatgcagtcgtctcatcccacccacagtcagcgaggaagatgatgatgatggtgac
gatgtacaactcaccctcaaggagctactagcagaatttcatgaaaaggctgagcagaac
tcatttgggggtctctttgcacgccgagaggatgaatggaagacagaagctcctgtgctg
tcccatcaggccatgtgggagaacgagattcaagtctatgagctgcagaaaggcgattct
ggcctgggattcagtatactagactaccaggaccccatgaacccagggcgtactgtgata
gtgatccgctctcttgtagcaggcgggttggcagagagagatggccgcttgttgccaggc
gaccggttgatgttcgtgaacgggactgacttgagccacgcgagtctggctcaggccgtt
catgtcctgaagagcactgctttgggcaccgtacgaattggagtcaccaaacccctaccg
gaaaatgacattcaggacacaggagatgatataacaggcaacagccactcagaaaataac
aaccagcacagcactttgcagacaaattcccactctcaaaacagcaagatggaggctgat
gctaaacatgtctccagcccctcaagtggctatgagagaaccataacaatagtcagggga
aactccagtctgggaatgacagtgagttccttaagggatggttcaggcatgataatccgc
tctgtggtgcatggcgggtcgatcagtaaagacgggagactggcagtgggggatggaatt
gttgccatcaatggagaatccaccaccaacctgtccaatgcacaagccagagcaatgcta
cgcagacattcactaatcggacctgatctcagtgtgacatatgtacctgctgccgtcttg
gacatgcacagagccaactatacccaatctaaagaggaaatggaaaaacacacaacaact
actgtccaatccaagcactcacagaacctaccttttaaacccttagaatgcatttctgaa
caacaaagtacagtggatggtaaaggagtgaatggaaagactcaagctgaagaagagaat
gaaagactagataaccacaatcaaataaagcaaagagaaagcactgaaagtttggaaaga
gagcaaaaggtgaagaatgaaagaacagtcccgcagaatgaaaacggacaaagacaaggg
agagaaaaagacaggcgaacagatgaagaagagacacatgggaaggatcgtagttcatgg
agtcagccaagaagagtaacattattcagggctgggggcacgtgtcttggcttcagtgtg
gtggggggtcgtggtatgggcagtcgactgagcaatggagaaatgagacggggcatcttc
ataaaacacatcgcagaggacagtccagctgcacgcaacagcactctgaaagaaggagat
cgaattcttcaggttcaaggtgtagatgtgagtgattttactcatgaagaaaccgtcgag
gcaatccgtagagcaggagacaaagtagaactgctagtgcaaagtcctcagttttcagct
cctggcaactgctctgaagatgacagtgtgtcaaaatcaaattctcaaaatcatcaggaa
cccgagatccccaataattccccaagctaccccttcagtcccatcccttttaagcgtaca
gaagactggaagttggggaagcctcccctcctgaaactgccctctaggcaagtcgacaca
gaaacagatggagtgcagagggttccagagagaccacccctgccagaagaggcttcgcat
caacacagcgagctagagcaggagcaggcctcttactggagccgcatgcagcagaggtat
ggcagtctgcctggagagctgcacatgtttgatctggactgtggctcacacagctctgga
ctgggactgtgtttgtcaggaaacagagatgaagcgcgtggtagaatgagtgtgtacgtg
ttagagatcaaaccagacggggccgctgccgcagatggtcgggtcagagtgggagatgaa
ctactggagataaatggacaagtgctgtatggacgcagccaccagaatgcaacagcaatc
atcaacaacgttcgagctaaagtcaggattctgctcacgaggaataaagcaacagagaac
caaatgactgaaggaccagtaaaagagatggacaactgtcctgttgtatctcctgccatg
cctattaatatcatcagagaagctcaacatttagctttgtcacaggatggaaggatcagc
agagaggataaactcaagtcctgctcctcagagaatctcaacattggtcttcctgctcca
atcaatgccacatccaatcataagccctcctgtcatcctgccagtcacatgtctcccagc
tactgtactcctccgtcatctggcatttcatcagctgatgagaacatccactgcggctcc
acagtcgatcagagctcttgcacgacggggcctcacagcacttcttacttgacccagtgt
tctgtgggctctgaccccctaacatgtcccatcatacctggctgtataaataccattgat
atctgcaagggcaccacagggctcggcctcagcatagtaggaggctgcaacacagtactg
ggtgtaatagtgattcatgaagtgaataaggatggtgcagcacacagggatggtcggtta
tgggcaggagatcatatactagaggtgaacggcattgatctgagaatggccactcatgag
gaggccttgagcgtcctgcgcttgagcccacagcgtgtgcaattgtgtatctacagagac
tctgtgacagagaaccactccacacacacactccagaaccacacacctgaagacatgtgg
gacctcttcagtgtggaactgaacctcaaaacgggacagggaccggggcttcgcattgtg
ggaaaaaggaatgacactggaatctttgtgtctgagataacaaggggaggggctgcagac
ttggatggaagactgttgctaggtgaccagattttgtctgtgaatggagaggacatccga
gctgcatcacaggactatgcgagtgctctgctgcagaggtgtagtgggtctgtgctgttg
gaggttgcacgttttaaagcttcatcgcattactcttatggagatcaggtgggcgagatg
gacgtccctcttctctcctctctcagcgcacttgattctgtggatgaaaatgtggacatc
agaactgtcaccattcagaagcatgaatgtgagtccgtggagctgagattgagaggcaca
caaggagatggcatgatatgtatctccaacctggacccaaccacacctgcagcacgcgca
ggacttcttcagctgggtgccagggtcatcagcattaacggtacatcaactgaacgtctc
tcagttatcgaggcaagtactctcctgagagacagcagcggagctgtcacactgcaggtg
atgccaagtggctgtgcagatggagctagcaaagatcggtcacctttaattcactcctca
cctggactctcagagaattacaatacccacaaccaccagagttctcctcagttccagact
atcactcttgaacgtggctctgccgggcttggcttcagtattgtaggaggatttggcagt
tcccatggtgacttgcccatctatgtcaagaacatatttcccaagggagccgcggtggag
gacgggcgtctgcgacgcggtgatcagctgctgacagtaaatggacaaagtctggatggt
gtcactcaatctgaagctgtcgagctccttagacaaaccagtgggacggttactctacaa
gtactctcaaaaagactaccaacatgctga
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