Garra rufa (doctor fish): 141337396
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Entry
141337396 CDS
T11039
Symbol
xylt2
Name
(RefSeq) xylosyltransferase 2 isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
grf00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
grf01100
Metabolic pathways
Module
grf_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
141337396 (xylt2)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
141337396 (xylt2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
grf01003
]
141337396 (xylt2)
Enzymes [BR:
grf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
141337396 (xylt2)
Glycosyltransferases [BR:
grf01003
]
O-Glycan biosynthesis
Glycosaminoglycan
141337396 (xylt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
141337396
NCBI-ProteinID:
XP_073699313
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Position
1:complement(57013368..57067569)
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AA seq
810 aa
AA seq
DB search
MDPVAFEKNALSGANHGQSRQRQDQPAITTVIRRGSRRRNKPSLKDKSLGAPEDGVAVEK
AAHYDPSSSRNFSDTRAGEMARIHLVAPGEPGSVEGAPQVPNSDFVPKCEISGKDALSAL
HRAGSRQCRQEIANIVCQHQAGQLMPQSLPQFCPQHVISSAVQHADFADADLSKVENPVR
VVFMLVVHGRAVRQLKRLLKAIYHKDHFYYIHVDKRSNYMHREVLQMAELYPNVRATPWR
MVTIWGGASLLKAYLRSMHDLLSMLDWKWDFFINLSATDFPTRTNDELVAFLSQNRDKNF
LKSHGRENARFIKKQGLDRLFHECDNHMWRLGERTIPEGLEVSGGSDWFSLTRKFVEYVV
NSEDGLVTGLKQFYTYALLPAESFFHTVLGNSHMCDTLVDNNLRVTNWNRKLGCKCQYKH
IVDWCGCSPNDFKPSDLIRIQQLTRPTFFARKFESTVNQEAIEILDNHLYGQYAPGTVAL
KAYWESLFEQADGVSSLNDVALTAYSSFFRLGLRKQETPQSSSEACRFEPIGYPVSVHLY
FYDDRFQGYLVRQEVQNVVTRSREMLEVWAVPQATLQLEHNLHEFERLKHLEVGTDWDPK
ERIFRNFGGVMGPLDEPVAVQKWARGPNLTATIVWIDPAHIVAASYDISIDVEAEFTQYK
PPLQRPLRPGVWTVRVLRLWERVAEARFLVMPLAFKGREPLRTEDHGWVHAGPPGNVYLE
QSFQQLAHVLNLPPSEPALQEAQKKTTLVGKPLEAWVDSSVGAFWVTGDICSEQTSSCPS
IGLCTKTSWSSLSPDPKSELGQVKKDGRIR
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggaccctgtggcctttgagaaaaacgccctgtcaggggcgaaccacgggcagtcgaga
cagcgccaggatcagcccgccatcaccactgtcatcaggagggggtctagacggagaaac
aagccctctttgaaggacaagagtctgggcgcgccggaagatggggtggcggttgaaaaa
gccgctcattatgatccttcaagcagccgtaacttcagcgatacacgggcaggggaaatg
gccagaatccatctagtagcacctggagagcctggcagcgttgagggtgctcctcaagtc
ccgaacagtgactttgtgcccaaatgtgagatctctggcaaggacgctctgtctgccctc
caccgtgcgggttcacggcagtgcagacaggagatcgccaacatcgtatgccagcaccaa
gcggggcagctcatgcctcagtctctgcctcagttttgcccacagcatgtcatctccagt
gcagtccagcatgcagattttgccgacgctgacctttccaaggtggagaacccagtcagg
gtggttttcatgctggtggttcatgggcgagcagtccggcagttgaaacgtcttctcaaa
gccatctatcacaaagaccacttttattacatccatgtggacaagcgttcaaactacatg
caccgggaggtgctgcagatggcggagctgtaccccaatgtgagagctacaccctggcgt
atggtcaccatctggggcggagccagtctgttgaaggcctacctgcgcagcatgcacgac
ctgctgtcaatgctggactggaagtgggacttcttcatcaacctcagtgccaccgacttc
cccaccaggaccaatgatgagctcgtggcttttctctcccagaaccgtgacaagaacttc
ttgaagtctcacggcagagagaacgcaaggttcattaagaagcagggtttggatcgcctg
ttccatgaatgtgacaaccacatgtggcgtttgggcgagcgcaccatccctgagggtctg
gaggtgtcaggaggctcggactggttctccctcacgcgcaaatttgtggagtatgtggta
aactcagaggacgggctggtgacggggctcaagcagttttacacctacgctcttctgcct
gctgagtctttctttcacacagtgctgggaaacagccacatgtgtgatactttggtcgac
aataatctgcgtgtgaccaactggaaccggaagttgggctgcaagtgccagtataagcac
atagtggactggtgcggctgttcaccaaatgacttcaaaccctcagacctcatcagaata
cagcaactaacgcggcccacgttcttcgcccgcaagtttgagtccacagtgaaccaggag
gctattgagatcctggacaatcatctgtatgggcagtacgctccgggaacggtggcactg
aaagcttactgggagagtctgttcgagcaggctgatggggtgtcttccctcaatgatgtg
gccctcacagcgtactcctccttctttagactgggcctccgtaagcaggagacccctcag
agcagttctgaggcctgcaggtttgaacccattggctaccccgtctcggtgcacctgtat
ttttatgatgaccgttttcagggttacctggtcaggcaggaggtgcagaatgtggtgacc
aggtcccgtgagatgctggaggtgtgggctgttcctcaagcaacactgcagctggagcac
aatcttcatgagtttgaacgcctcaaacatcttgaggtcggaactgattgggacccgaag
gagcgaatcttccgtaacttcggtggtgtgatgggacctctagatgagccggtggcagtt
cagaagtgggctcgtggacccaacctgacagccactatagtgtggattgaccctgcgcac
atagtagcagcctcctatgacatcagcatagatgttgaggcggagtttacgcaatacaag
ccaccgcttcagcgccccctcaggcctggagtgtggacagtgcgtgtgctacggctgtgg
gagcgcgtagcagaagctcgctttctggtcatgcctctggccttcaaaggacgtgagccc
ctgcgcacagaagaccatggctgggtacacgcagggcctccaggtaatgtgtatttggag
caaagcttccagcagctcgcccatgttttaaacctgccgcccagtgagcccgccctgcag
gaggcgcaaaagaagaccaccctggtggggaagccactagaggcctgggtggacagctct
gtgggggctttctgggtcacgggagacatttgctctgagcagacctcctcctgtccctcc
ataggactctgcaccaaaacctcttggagttccttgtcccctgaccccaaatcagaactg
gggcaagtcaaaaaagacggtcgcattaggtag
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