Garra rufa (doctor fish): 141337400
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Entry
141337400 CDS
T11039
Name
(RefSeq) amyloid-beta A4 protein-like isoform X1
KO
K04520
amyloid beta A4 protein
Organism
grf Garra rufa (doctor fish)
Pathway
grf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
141337400
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
grf01002
]
141337400
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
grf00535
]
141337400
00536 Glycosaminoglycan binding proteins [BR:
grf00536
]
141337400
Peptidases and inhibitors [BR:
grf01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
141337400
Proteoglycans [BR:
grf00535
]
Cell surface proteoglycans
Others
141337400
Glycosaminoglycan binding proteins [BR:
grf00536
]
Heparan sulfate / Heparin
Others
141337400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Mucin
Insulin_TMD
HTH_Tnp_Mu_1
HrpE
Motif
Other DBs
NCBI-GeneID:
141337400
NCBI-ProteinID:
XP_073699314
LinkDB
All DBs
Position
6:complement(54191420..54233009)
Genome browser
AA seq
741 aa
AA seq
DB search
MGCRELFILLMAATSTLAVEVPSDSGTGLLAEPQVAMFCGKLNMHINVQTGKWEPDPSGT
KSCIGTKEGILQYCQEVYPELQITNVVEANQPVSIWDWCKKGRKQCRSHMHIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDMCESHLHWHTVAKESCGDRSMNLHDYGMLLPCGIDRF
RGVEFVCCPAEAEKETDSAAVEEDDSDVWWGGAENDYSENSMTRDAGSEPAVVEDDEDAD
EEEEVLDNDQDGDGDEDEKEDEDDEAVDERQSTSVAMTTTTTTTTESVEEVVREVCFASA
ETGPCRAMLPRWYFVREEGRCAPFIYGGCGGNRNNFESEEYCLSVCSSVLPTPSSSPPDA
VDRYLETPADENEHAHFLKAKESLEAKHRERMSQVMREWEEAERQAKSLPRNDKKAVIQH
FQEKVEALEQEAASERQQLVETHMARVEALLNDRRRLALESYLSALQADPPRPRHVFSLL
KKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRPQVLTHLRVIEERMNQSLGLLYKVPGV
TEDIQDQVELLQREQQEMSAQLANLQSDVRVSYGNDALMPDSTASLDLLPAEDTQGFGFI
HPESFNQPNTQNQVEPVDARPIPDRGLPTRPVSGLKPEDVPELRMEAEERHSEVYHQKLV
FFAEDVSSNKGAIIGLMVGGVVIATIIVITLVMLRKKQYTSIHHGIIEVDAAVTPEERHL
SKMQQNGYENPTYKFFEQINN
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggggtgtcgagagcttttcatattactgatggccgcgacatcgacgctcgctgttgag
gtgccgtcggactccggtaccggactgctggccgagcctcaggtggccatgttctgcggg
aaactcaacatgcacatcaacgttcagaccggaaaatgggaacccgatccgtccggaacc
aagagctgcatcgggacaaaagagggaatcctgcagtactgccaagaggtgtatccagag
cttcagatcacaaacgtggtggaggccaatcagccggtcagtatctgggactggtgtaag
aagggccgtaagcagtgccgcagtcatatgcacatcgtggtgccgtaccgctgcctggtt
ggtgagtttgtgagcgacgctctgctggttcctgataagtgtaagttcctgcaccaggaa
cgcatggacatgtgtgagagtcacctgcactggcacaccgtcgccaaagagtcttgcggc
gaccgcagcatgaatctccatgactacgggatgctgttgccatgcggtatcgatcgtttc
cgtggcgtcgagtttgtttgttgtcctgcagaagcggagaaagagacggacagcgcagcc
gtggaggaagacgattcagacgtctggtggggaggagctgagaacgactacagcgagaac
agcatgacgagagacgcaggatccgaaccggccgtggtggaggacgacgaagatgcggac
gaggaagaggaagttctggacaacgaccaggatggagatggagacgaggatgagaaggag
gacgaagacgacgaggcggtcgacgagcggcagagcaccagcgtcgcaatgaccacaacc
acaacgacaaccacagagtcagtggaggaggtggtgagagaggtgtgttttgcgagtgca
gagacgggcccctgcagggccatgttgccccgctggtattttgtgcgtgaggagggccgc
tgcgctccattcatctacggcggctgcggaggaaaccgcaataactttgagtcggaggag
tactgtctgtctgtctgcagcagcgtcttgccgactccctcctccagccctccggacgcc
gtggaccgatacctggagacaccagctgacgaaaacgaacatgcgcacttcttgaaagcc
aaagaaagcctggaggccaaacaccgcgagcgcatgtctcaggtgatgagggaatgggag
gaggccgagagacaggccaagagtttaccgcgcaatgacaagaaagccgtgatccagcat
ttccaggagaaggtggaggctctggagcaggaggcggccagcgagcgccagcagctggtg
gagacacatatggcacgagtggaagcgcttctgaacgaccgccggcgcctcgctttggag
agctacctgtccgccctgcaggccgatccgccccggccgcggcacgtgttcagtctgctg
aagaagtacgttcgcgccgagcagaaggaccgacagcacacgctcaaacacttcgaacac
gttcgcatggtcgaccccaagaaggccgctcagatccggcctcaggtgctgacccatctg
cgtgtgatcgaggagcggatgaatcagtctctcgggctgctgtacaaggtgccgggagtc
actgaagacattcaggaccaagtcgagctgttgcagcgcgagcagcaggaaatgtccgct
cagttagcaaacctgcagagcgacgtgagagtgagttacggtaacgacgccctgatgcct
gacagcaccgccagcctcgacctgctgcccgctgaagacacgcagggattcggattcatc
caccctgagagctttaaccagcccaacacacagaaccaggttgagccagtggatgcacga
cccatcccagaccgaggcctgccgacccgaccagtgtctggactgaagcctgaagatgtt
ccagagctgcggatggaagcggaagagagacacagtgaagtttaccaccagaaactggtt
ttcttcgcggaggacgtgagctccaataagggagctattattggcctgatggtcggaggt
gttgtcatagcaaccatcatcgtcatcaccctggtgatgctgaggaagaagcagtacacg
tccatccaccacggaatcattgaggtggacgccgccgtgaccccagaggaacgtcacctg
tctaagatgcagcagaatggctatgaaaaccccacttacaagttcttcgagcagataaac
aactga
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