Garra rufa (doctor fish): 141337559
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Entry
141337559 CDS
T11039
Symbol
cacng5b
Name
(RefSeq) voltage-dependent calcium channel gamma-5 subunit isoform X1
KO
K04870
voltage-dependent calcium channel gamma-5
Organism
grf Garra rufa (doctor fish)
Pathway
grf04010
MAPK signaling pathway
grf04260
Cardiac muscle contraction
grf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141337559 (cacng5b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
141337559 (cacng5b)
04261 Adrenergic signaling in cardiomyocytes
141337559 (cacng5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141337559 (cacng5b)
Ion channels [BR:
grf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
141337559 (cacng5b)
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Motif
Pfam:
Claudin_2
PMP22_Claudin
SUR7
TM225
Motif
Other DBs
NCBI-GeneID:
141337559
NCBI-ProteinID:
XP_073699473
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Position
1:58436275..58451577
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AA seq
299 aa
AA seq
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MSACGRKALTLLSSVFAVCSLGLLGIAVSTDYWLYLEEGVILPLNQSADIRMSIHSGLWR
VCFLAGEERGRCFTIEYVMPMSVQLTSESTVSVLKMIRSATPFPLVSLFFMFIGFVLNNI
GHIRPHRTILAFVSGIFFILSGTLLLPPLSVWHVLFTRLMFVCHTGLSLVVGLVLYISSI
NDEMFNRTKSNEAYFSYKYGWSFAFAAISFLLTESAGVMSVYLFMKRYTAEEIYQPHPSF
YRPRLSNCSDYSGQFLHPDAWTRGRSPSDISSDTSLQMNASYPALLKCPDYDQVSSSPC
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgtgcgggaggaaggctctgaccctgcttagcagtgtgtttgcggtatgcagt
ctggggctgctgggtatcgctgtcagcactgactactggctttacttggaggagggcgtc
atcctgcctctcaaccagagcgctgacatacgcatgtccatccactctggcctctggaga
gtgtgttttctggcaggtgaggagaggggtcgctgcttcaccatcgagtatgtgatgcca
atgagcgttcagctgaccagtgagtctactgtcagtgtcctgaagatgattcgttcggcc
acaccgttccccctggtcagtttgttcttcatgttcatcggttttgtgctcaacaatatc
ggacacattcggccccatcgcaccatattggcatttgtctctggaatctttttcatcctg
tcaggtacacttcttcttcctcctctgtcagtctggcatgtcttattcaccagactgatg
tttgtctgtcacacaggtctgtctctggtggttggtttggtgctttacatctccagcata
aatgacgagatgttcaacaggaccaagagtaatgaggcgtatttcagctataagtacggc
tggtcgtttgcgttcgctgccatttccttcctgctcactgagagtgcaggtgtgatgtcg
gtctacctgttcatgaagcgttacacagcggaggaaatctaccagccccaccccagcttc
taccggcctcgtctgagcaactgctccgattactctggtcagttccttcatcctgacgcc
tggacgcgaggacgcagcccgtcagacatctccagcgacacctcactccagatgaatgcc
agctaccctgccctgctcaagtgccctgactatgaccaggtgtcctcctctccctgctga
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