Garra rufa (doctor fish): 141337842
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Entry
141337842 CDS
T11039
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
grf Garra rufa (doctor fish)
Pathway
grf04110
Cell cycle
grf04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
141337842
04114 Oocyte meiosis
141337842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141337842
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
grf00535
]
141337842
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
141337842
Meiosis-specific proteins
Cohesin complex and associated proteins
141337842
Proteoglycans [BR:
grf00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
141337842
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
141337842
NCBI-ProteinID:
XP_073699523
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Position
7:complement(36605765..36638257)
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AA seq
1216 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKARISAMKEEKEQLSSERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNNVKEREER
GISRLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKERNLEQYSKLDQDLNEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLSKLDVRDTAY
PETNDAIPMISKLRYSPNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRVKDTMARSEDLDTLIDKTEVEIKDHQKS
MERWKNIEKEQNEAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDTEGGQSQDEGEGGDSERGS
SSQSNVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYL
FDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVI
SAEQAKDFVEDDTTHG
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtacattaaacaggttattattcaggggtttcgcagctacagagatcagactgtggtt
gatcccttcagctccaaacacaatgttatagttggaagaaatggatcaggaaagagtaac
ttcttttatgccattcagtttgtactcagtgatgagttcagtcatcttcgtccagagcag
cgtctggctctgcttcacgaaggcactggtcctcgggtcatttccgccttcgtggagatt
atatttgacaactccgacaacaggctgccgattgataaggaggaggtgtctctgcgtcgt
gtcatcggcgcaaagaaagaccagtacttcttggacaaaaagatggtcactaaaaacgat
gtgatgaaccttttggagagtgctggtttctcccgcagcaacccttactacattgtcaaa
cagggaaagatcaatcaaatggcaacagcgcctgattctcagcgtctgaagctgctcaga
gaggtggctggaaccagagtctatgatgagcgcaaagaagagagtatttcgctcatgaag
gaaactgagggaaagcgagagaagattaatgagctgctaaagtacatcgaggagcgtctg
cacactctggaggacgagaaagaagaactggctcagtaccagaagtgggacaaaatgaga
agagctttggagtacaccatctacaaccaggagctcaacgagacccgggccaaactggat
gagttgtccagtaagagagaaacctgtggagacaaatcaagacaactgcgagacgctcaa
caagatgctcgagacaaagtggaggagacggagcgtgtggtgagggagctgaaggctcga
atctccgccatgaaggaggagaaggaacagctgagctcggagcgacaggagcagatcaaa
cagaggaccaaactggagctcaaagccaaagatctgcaggacgagctggcaggaaacagc
gaacagaggaaacgactgctcaaagagcggcagaagcttctggagaagattgaagaaaaa
cagaaagagctgcaggaaacagagcccaaatttaacaacgtgaaagaaagagaggagcga
ggaatttcccgactggctcaagccacacaagagcgaacagacctgtatgccaaacaaggc
cgaggcagtcagttcacctctaaagaagagagagacaaatggatcaagaaagagctgaag
tctctggatcaagccatcaacgacaagaaacggcagattgcagccatccacaaagatctg
gaggacactgaagccaataaagagagaaacctggaacagtacagtaaactggaccaagac
ttgaacgaagtgaaaactcgagtggaggagctggacaagaagtactacgaggtgaagaac
cgcaaggatgaacttcagagtgaaagaaactacctgtggagagaggagaacgcagaacag
caggcgctggcagccaaacgagaagacctggagaagaaacaacagctactgcgagcagcc
accggaaaggctattctgaatggcatcgacagcattaataaagtattggagcatttccgt
cggaagggcatcaaccagcacgtcatcaacggttatcacggcatcgtcatgaacaacttt
gagtgcgaacctgctttctacacctgtgtggaggtgactgctggcaccagattgttttac
cacattgtggaaacggatgaagtgagcaccaagattctgatggagtttaataagatgaac
ttgcctggagaggtcaccttcctgcccctcagcaaactggacgtcagggacacagcttac
cctgagactaacgatgcaatccccatgatcagcaagctccgttacagtccgaacttcgat
aaggccttcaaacacgtctttggaaagacactgatctgccgcagtatggaagtgtccact
cagctggctcgagctttcaccatggactgcatcactctggaaggtgatcaggtgagtcat
cgtggtgctctgaccggtggctactacgacacacgtaagtcccgtctggagctgcagaag
gacatgaggaaggcagaggaggagcttggagaactggaggccaaactcaacgagaacctg
cgtagaaacattgaacgtatcaacaatgaaattgaccagctgatgaatcagatgcagcaa
attgagactcagcagaggaaattcaaggcgtccagagacagcatactgtctgagatgaag
atgctaaaggagaagagacagcagtcagaaaaaacatttatgcccaagcaacgcagtctt
cagagtctagaggccagtctgcacgccatggagagcacacgggagtctctgaaagcagag
ctgggaacagacctactctctcagctcagtttagaagaccagcgcagagtggacgacctc
aacgatgagatcagacagctgcaacaggacaacagacaattgctgaatgagagaattaag
ctggagggaatcatgaccagggtggagacgtacctcaacgagaacttgcgcaaacgtctc
gaccaagttgagcaggaattgaatgagctgagagaaactgaaggaggaaccgttctcact
gcgacaacgtcagaactggatggcattaataaacgcgtaaaagacactatggctcgatcg
gaggatttggacactctcatcgataagacggaggtggaaataaaggaccaccagaaaagt
atggagcgttggaagaacatcgagaaggagcagaacgaagccatcaaccacgacaccaag
gagctggagaagatgaccaacagacagggcatgttattgaaaaagaaagaggaatgcatg
aagaagatccgtgagctgggttcccttccgcaggaggcttttgaaaagtaccagacgctt
acgctcaaacagttgttcaggaagctggagcagtgtaacacagagctgaagaagtacagc
catgtgaataaaaaagccctggaccagtttgtcaatttctcagagcagaaagagaagttg
attaagaggcaggaagagctggacagaggatacaaatccatcatggagctcatgaacgtc
ctggagctgcgcaaatacgaggccatccagctcaccttcaaacaggtgtctaagaatttc
agcgaggtatttcagaagctggtgcctggcggtaaagccactctggtgatgaagaagggc
gacactgaaggtggccagtctcaggacgagggcgagggaggagacagcgagaggggatct
tcctcccagagcaacgtgcccagtgtagaccagttcactggagtgggcatcagggtgtcg
ttcactggcaaacagggagagatgagagagatgcagcagctttctggaggtcagaagtct
ttggtggctctggctctcatctttgccatccagaaatgtgaccctgctcctttctacctg
tttgatgaaatcgaccaggctctggacgcccagcacagaaaagcagtgtcagacatgatc
gtggagctggctggacacgctcagttcatcaccacgaccttcagaccggagctgctggag
tcagccgacaagttctacggcgtcaaattcagaaacaaggtgagtcacatcgatgtgatc
tcagcagagcaggcgaaggactttgtggaggacgacaccactcacggctaa
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