Garra rufa (doctor fish): 141338019
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Entry
141338019 CDS
T11039
Symbol
cacna2d2b
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2b
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
grf Garra rufa (doctor fish)
Pathway
grf04010
MAPK signaling pathway
grf04260
Cardiac muscle contraction
grf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141338019 (cacna2d2b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
141338019 (cacna2d2b)
04261 Adrenergic signaling in cardiomyocytes
141338019 (cacna2d2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141338019 (cacna2d2b)
Ion channels [BR:
grf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
141338019 (cacna2d2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
VWA_CoxE
Cache_3-Cache_2
dCache_2
Fe_dep_repress
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
141338019
NCBI-ProteinID:
XP_073699693
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Position
7:17404467..17426765
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AA seq
1033 aa
AA seq
DB search
MFQFYSEKRRQFSLVRNNPRDIVEKVATDIERLLAKKRKALEKLASEAERLQKDHRWQDG
IKEENIEYYNSKAEMDYDGEDIDSQMSLKLEFEYDPNFKNHVNYSHTAVQIPTDIYKGAP
VILNELNWTQALERVFIENSRDDPSLLWQAFGSATGVTRYYPAAPWRAPDKIDLYDVRRR
PWYIQGASSPKDMVILVDVSGSVSGLTLKLIKASVTEMLDTLSDDDYVNVARFNEKAEAV
VPCFRHLVQANVRNKKIFKEAVQQMQAKGTTDYKSGFHFAFNQLLNKTNVPRANCNKIIM
LFTDGGEDRAQDIFEQYNWPNKTVRVFTFSVGQHNYDVTPLQWIACANKGYYFEIRSICA
IRINTQEYLDVLGRPMVLAGKSAKQVQWTNVYQDALGLGLVVTGTMPVFNLTVDGNSQNQ
LILGVMGVDVHLDELKRLTPQYKLGANGYIFAIDPNGYVLMHPNLQPREEDLPEPVTLDF
LDAEVEDSSKQEIRRQMIDGRSGDMTIKTLIKSMDERYIDDVTRMYTWTPINDTDYSLGL
VLPPYSEYYIQADLSDVMLQLQYLQSLLPNSFESAGHVFLAPREYCKRLQMAENNTQFLA
DFLSLMVEISPESEDCDQGLIHNLILDSGILWQLASRVWQNKDLNTYGFLALFASTNGGV
TRVYPNTAAESWDEDPEPLNSNFYRRTLDNKGYIFRAPTRTSMDDLLITENGTVGILVTT
AVEVVISGKTMKPAVVGVKLDLEAWVDKFKILASNVSDSRQAAHKCGPSRSCEMDCEVNS
DDLLCYLIDDGGFLVMSNQRDHWKKVGLFFGEVDPYLMFALYNNSIYARHQTFQYQSACE
PTASSHTGAAHRGFYVPSIADFLNLAWWTSAAAWSILQQFLYGLIYSSWFTAEDAWAESY
SDTKGSSSCVTVYSQFYFTNTTNSFNVLQDCGNCSRLFHAKRIENTNLLFVVAETLPCSS
CEIEKLLPVRTKSQEENPCEVLNSARYRKGPDKCFDYNSEENTSECGSAHSLHCPMRVLL
WIQLLWLYLILRS
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagttctacagtgagaagagaagacagttcagtctggtcagaaataaccctcga
gacatcgtagagaaagtggcgactgacattgagagactgctggccaagaaacgcaaagca
cttgagaaacttgcgagtgaagcggagcgacttcaaaaagatcatcgctggcaggatgga
atcaaggaggaaaatattgaatattataactctaaagcagagatggactatgacggtgag
gacatcgattcccagatgtctttgaaactggagtttgagtacgatccgaacttcaaaaac
catgtgaattactcacacaccgccgttcagatccccacagacatctacaaaggcgctccg
gtgattttgaacgagctgaactggacgcaggcattagagcgagtcttcatagagaacagc
agagatgatccgtcattgctctggcaagcgtttggtagcgccaccggtgtcacgagatac
tacccagctgctccctggagagcaccggataagatcgacctttatgatgtacgacgacgc
ccctggtacattcaaggagcatcatcacccaaagatatggtcattcttgttgatgtgagc
gggagcgtcagtggactcactctcaaactgatcaaagcttcagtaacggaaatgctcgac
acgctctctgacgatgattacgtcaacgtggccaggttcaatgagaaggccgaggcggtg
gtgccctgctttagacacctggttcaggcgaatgtgcgcaataagaagatctttaaagaa
gctgtgcagcagatgcaagccaaaggaaccaccgattacaaatccggctttcatttcgcc
ttcaaccagctgctcaacaagacaaatgttcctcgagccaactgtaataaaatcatcatg
ttatttactgacggaggggaggaccgagctcaggacatctttgagcagtacaactggccc
aataagacggtccgcgtgttcacgttctcggtggggcagcacaattatgatgtcactccg
ctgcagtggatcgcatgtgctaataagggatactattttgagatccgctccatctgtgct
atacggattaacacccaggaatatctggacgtgttgggccgccccatggttctggcagga
aaaagtgccaagcaggtgcaatggaccaacgtctatcaggacgcactgggtttgggactc
gtggtgacggggacgatgccggtgttcaacctcactgtggacggaaactctcagaatcag
ctgattttaggagtcatgggggttgacgttcatctggatgagctgaagagactcacgccg
caatacaagctgggagcaaatggatacatcttcgccattgacccaaatggatacgtgctg
atgcatccgaaccttcagcctcgagaggaggacttgccagagccggtgacactggatttc
ctagatgcagaagtagaagacagcagcaaacaggagatccgccggcaaatgattgatggc
cgatcgggagacatgacgatcaaaactctaattaaatcaatggatgagcgctacattgac
gacgttacgcgtatgtacacctggacgcccatcaacgacactgattacagtctgggtctg
gtacttcctccgtacagcgaatattacatccaggctgatctcagcgatgtcatgctacag
ctgcagtatttacagtctctgctgccaaactcgtttgagtcggctggtcacgtgtttcta
gctccaagagaatactgcaagcgtctgcagatggctgaaaataacacacagttcctagca
gactttctgtctctgatggtggagatctcacctgaatctgaagactgtgatcagggtctc
attcataacctaatcttggattctgggatcctctggcagctcgcctcacgcgtttggcag
aacaaagatctcaacacgtatggcttcctggcgctcttcgcgtccaccaatggaggcgtc
acgcgagtttaccccaacacagctgctgaatcatgggacgaggaccctgaacctctaaac
tcaaacttctaccgtcgcactctggacaacaaaggctacatcttcagagcgccaacacga
acctctatggatgatctgttaatcacagagaatggcactgtgggaattttggtcaccacc
gccgtggaggtcgtgatcagtggcaaaaccatgaagcctgcagtggtcggcgttaagctg
gatttggaggcctgggttgacaagttcaagatcctcgcaagcaacgtttcagacagcaga
caggccgcacataagtgcggcccgtccagatcctgtgaaatggactgtgaagtgaacagc
gatgatttgctgtgttacctgatcgatgacggaggtttcctggtgatgtccaatcagaga
gatcattggaagaaggttggtctgttctttggcgaagtagacccctacttgatgttcgcc
ctctacaacaactcaatctacgcccgtcatcagaccttccagtatcagtcagcctgcgag
ccgacagccagcagtcacacgggagctgcgcacagaggattctatgtgccctccattgct
gattttctcaatctggcctggtggacgtcagcagcggcatggtccattctgcagcagttc
ctgtatggactcatctacagcagctggttcacagcagaagacgcctgggctgagagttac
tcagacactaaagggagcagcagctgtgtgacggtttacagtcagttctactttaccaac
accaccaactccttcaacgtgctgcaggattgtgggaactgctccaggttgttccacgcc
aagcgtatagaaaacacaaatctgttgtttgtggtggcggagacgctgccctgcagctct
tgcgagatcgagaaactcctacctgtcagaacaaagtctcaagaagagaatccgtgtgag
gtgttaaactccgcccgctatcggaaaggccctgacaaatgtttcgactacaactcagag
gagaacacgtcggagtgtggcagcgctcactctttacactgtccgatgcgagttctgctc
tggattcagttattgtggctttacctcattctccgatcgtaa
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