Garra rufa (doctor fish): 141338117
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Entry
141338117 CDS
T11039
Symbol
ccdc50a
Name
(RefSeq) coiled-coil domain-containing protein 50
KO
K25949
coiled-coil domain-containing protein 50
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141338117 (ccdc50a)
Membrane trafficking [BR:
grf04131
]
Autophagy
Other autophagy associated proteins
Others
141338117 (ccdc50a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
141338117
NCBI-ProteinID:
XP_073699778
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All DBs
Position
7:complement(33123093..33153654)
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AA seq
590 aa
AA seq
DB search
MADFSIDQNNLPGVKEVCRDFAVLEDHCLAHNLQEQEIESHLASNVHKSRLVQQDLQVAK
RLQEEEDLRAKAESQRQHRRMVRNLSDFVKNNLIFVPKINEGLMAHVSNSAPEGPLSCRD
SGSPGVEFDIPIFGTTVRCCFPPCFCTPPFTQTHFYTAPRFPPDLREPNPRSASPGYKKG
KNHVFDQMLSPYNSPEPDRKKYPNSRSGYPEYEPVELDRSRHPESPSKGRIQEYYSPERR
PKERNKPLDLDCTEPRRRKKQDQWDDLEPVVRRKEKPPRDYSAGQDKVWDKDRIRDRERE
RDGRRPKERSRDRNRTRSQDRLFSGEAKQVNRGRNLDREMERNGYRHGSRDRQRERGRDG
NRGRHRSRERELDDYGHVPSRGWSEEDLEWEDHKNSSRLPSGPNEVFEEPVLRVPSNEGW
SPGHSPRDRGRKPRGEYGMKEATHGLAHLELQDQELKDLEVARKLQEEELKASQFERRAA
QVAQDEELARRLMEEEKREYKRSRDKEKQGMERRRPEVEYNPVQEEVVRPRTREEPRIRE
DEYQRARNHKPTRPPPPTQHYENINPSYVYADGPYSPRPPSRPEAYKGSH
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttagtattgatcagaacaacctgcctggtgtaaaagaggtgtgccgggac
tttgccgtgctagaagaccactgtctggctcacaacctgcaggaacaggaaatcgagagc
cacctggcatccaacgtccacaagagtcgtctggtgcagcaggaccttcaagtggccaaa
cgtctgcaggaggaagaggatctgcgggccaaagccgagagccagagacaacaccgccgc
atggtcaggaacctctcggatttcgtcaaaaataacttaatttttgttcccaagataaat
gaaggccttatggcacatgtgtcaaactcagctcctgaagggccactgtcctgcagagac
agtggctctccaggagttgagtttgacatccccatctttggaacgacggtgaggtgttgt
tttcctccttgtttttgcactccaccttttactcaaactcacttttacacagcccctcga
tttccaccggacctgcgagagccgaatccccgctctgcttctccaggttacaaaaaaggg
aagaatcacgtctttgatcaaatgctttccccgtacaactctcctgagcctgacagaaaa
aaatatcctaatagccgtagtggatatccagaatatgagcctgttgagttggaccgatct
aggcatccggagagtccaagcaagggaaggatccaagagtactattcacctgagcgacga
ccgaaagagagaaacaaacctctcgatctcgattgcacagaaccacgtagaaggaagaag
caagatcaatgggacgacttagagccagtggtgcgccgtaaggagaagcctccaagggat
tactctgccggacaggacaaggtctgggacaaggacaggatcagggatcgagaacgagaa
agggatggacggagacccaaggaaaggtcgagagatcgaaaccggacaagaagtcaagat
cgactctttagtggagaagccaagcaggtgaacaggggtaggaacttggaccgggagatg
gagcgaaatggttacagacatggtagcagagacaggcaaagagaacggggcagagatggc
aacagagggagacacagaagcagagagcgagagctggatgattacggtcacgtcccaagt
agaggatggtccgaagaagacctggagtgggaggatcacaagaacagttcgaggctcccg
tcaggtcctaatgaggtgtttgaggagcccgttctcagagttccctcaaacgagggatgg
tcccctggtcattctcccagagatagaggtcggaagccacgaggagaatatggtatgaag
gaggcaacgcatggactagcccatttagaactacaagaccaggagctcaaagacttggag
gtggcacgcaagctacaggaagaagaacttaaggcgagtcaatttgaaagacgagccgct
caagttgcacaagatgaggaattagctcgacggctaatggaggaagagaaaagggaatat
aagagatcgagagataaggagaaacaagggatggagagaagacgacccgaggtggaatat
aacccagtgcaagaagaagtagtacgaccccgaacacgagaagagccacgcatcagagag
gacgagtaccagagagcacgcaaccacaaacccaccaggcctcctcctcccacacagcac
tacgagaacataaacccaagctacgtttatgcggacggcccatactctcctcgccctcca
tcaagaccagaggcgtacaaaggttcacattga
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