Garra rufa (doctor fish): 141338239
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Entry
141338239 CDS
T11039
Name
(RefSeq) 5-hydroxytryptamine receptor 3A
KO
K04819
5-hydroxytryptamine receptor 3
Organism
grf Garra rufa (doctor fish)
Pathway
grf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
141338239
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141338239
Ion channels [BR:
grf04040
]
Ligand-gated channels
Serotonin (5-HT3)
141338239
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
141338239
NCBI-ProteinID:
XP_073699884
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Position
7:complement(52120341..52130147)
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AA seq
422 aa
AA seq
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MRDEVLVYSDARPVISLSTPTNVTLDLTLYGILGVRWQIEGLTWDPVECGTKKISLPREK
VWIPDVVINEFMDENRAPETYYVYVTNNGQVLDGRPFHVISSCRLDIYTFPFDFQNCTYT
FNSYKHSRDDVQLFFLLPVEQIFKNSLDAITTKGEWELIDMRAEKPVQLYLDGGWDNLIV
YIVLRRRATLYVVNLLIPSSFLLSLDLFSFLLPPQSVDRASFKMTLILGYTVFLLLMNDL
LPVTGNNLPLINVFFSLCMALMVASLLETILITNVLYGSSDLPPLPNWLRILVLKYLARL
ACMKKPCDRHLEAANRPESPFYKNPMTDNAMTNIPKKELVSANPVKVWEQCLDEMKKMSQ
DLLAIRHQVEEHLNNDDKTDDWKMFGQVIDRVLFIMYSLFIVVSLSTIMVLWLYSYSLDK
RS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagagatgaagtcctcgtctacagcgatgcaaggccagttataagtctgagtactccc
accaacgtcactttggacttgactctctatggaatcttaggagtgaggtggcagattgaa
ggtttgacctgggaccctgttgagtgtggaacaaagaagatttcactaccaagagagaaa
gtatggattccagacgttgtcatcaatgaattcatggatgaaaaccgagcaccagaaacg
tattacgtctatgtgaccaacaatggtcaggtccttgacggacggccgtttcacgtgatc
agctcctgcagactggacatctacacctttccgtttgattttcagaactgcacctacact
ttcaactcttataaacactctcgtgacgatgttcagttgtttttccttctgccagtggag
cagatattcaaaaattctcttgacgcaataacaactaaaggagagtgggagctgatagac
atgcgggcagaaaaacctgtacagctctatctggatgggggatgggataaccttattgtt
tatattgtcctgagacgtcgagctacgctgtatgtggtgaacctcctgattcccagcagc
ttcctgctttctttggatctctttagcttcctgctgcctcctcaaagtgtggaccgtgct
tccttcaaaatgaccctcatcttgggttacactgtgttcctgctgctaatgaatgacctg
ctgcccgtcacaggaaacaacttaccgctcataaatgtgtttttctcactctgcatggcc
ttgatggtagcaagtctccttgagactatcctcatcaccaatgttctgtatggttccagt
gacttgcctcccttacctaattggctaaggattctggttctgaaatatcttgctcgactt
gcttgtatgaagaaaccttgcgacagacaccttgaagcagcaaacagacctgagagccct
ttctacaaaaaccccatgactgataacgccatgactaatattccaaagaaagaattagtt
agtgcaaatccagtgaaagtctgggaacaatgtcttgatgaaatgaagaagatgagtcag
gatttattggccattcgtcaccaagttgaagagcacttgaataatgacgacaaaacagat
gattggaagatgtttggtcaggtcattgaccgtgtactctttataatgtatagtctcttt
atcgttgtgagtttaagcacaattatggttctgtggctgtactcgtacagtctagacaaa
aggtcataa
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