Garra rufa (doctor fish): 141338244
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Entry
141338244 CDS
T11039
Name
(RefSeq) 5-hydroxytryptamine receptor 3C-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
grf Garra rufa (doctor fish)
Pathway
grf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
141338244
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141338244
Ion channels [BR:
grf04040
]
Ligand-gated channels
Serotonin (5-HT3)
141338244
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
141338244
NCBI-ProteinID:
XP_073699888
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All DBs
Position
7:complement(52186380..52191272)
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AA seq
484 aa
AA seq
DB search
MAVVLFSRPQAAGSTAMFPHFQLMICCLIMQSLLMKSTETISCSEPTTDGLLTALKQNIF
SKTEIRPVINLKTPTNISVTFTLYGILDVDEKAQKLNTFLWVNLFWNIEGLSWDPDECGT
DRISIPRKQLWRPDIIINEFIDENKVPDTYYLYLAYTGKVVDDLPFHVISSCNLDIYTFP
FDIQNCTFTFNSYQHTVLDVQLSFAEPVEETFKSSLEAMTTKGEWELVDMLAEKPTIPPH
EMNNSRDMLTYYIVLRRRATLYVVNLLIPSCFLITVDLFSFLLPPQSVDRSAFKMTLILG
YTVFLLLMNDLLPVTGNNLPLINAFFSLCLALMVASLLETILIINIQCGSTHYGPLPRWA
KVLFLNYVAKLVRLSKKTNDQNCDPEERRTETKRCDPPFETSQSEATHKTPALLELKKIS
HELQSIRQQVDKQLKTDESADEWVHLGQVIDRLLFCLYIVFLSVSFITIVVFWIYWYRKN
ASLI
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctgtagttttgttctcaagaccacaggctgctggatccacagctatgtttccacat
ttccagctcatgatctgctgtctcatcatgcagtctctactgatgaaatccacagagacc
atcagctgctccgaacccactacagatggtctcttaacagccctgaagcaaaacatcttt
agcaaaactgaaataaggccagttattaacctgaaaactcccaccaacatcagtgtgacc
ttcactctgtatggaattttagatgtggatgaaaaagcacagaagcttaacacattcctt
tgggtaaatttgttttggaatattgaaggcttgagctgggatcctgatgaatgtggaaca
gacagaatttcaataccacgaaaacaactgtggaggcctgatattatcatcaatgaattc
attgatgaaaataaagtcccagacacatattacctctacctcgcatatactggtaaggta
gtggatgatcttccatttcacgtcattagttcttgtaacctggacatctacacctttcca
tttgatattcagaactgcaccttcacctttaattcataccagcacactgtgctggatgtt
cagttgtcctttgctgaaccggtggaggaaacgttcaaaagttctcttgaagcgatgaca
actaaaggagagtgggagctagtcgacatgcttgctgaaaaacctacgatacctccccat
gaaatgaataactcacgggacatgctcacttactatattgtcctcaggcgccgggcgact
ttgtacgtggtgaacctcctgattcccagctgcttcctcattactgtagatctgttcagc
tttcttctgccacctcagtccgtggatcgttctgccttcaaaatgaccctcattttgggt
tacactgtattcctactgctaatgaacgacctgctgcccgtcacaggaaacaacttgcct
ctcataaatgcatttttctccctctgcttggctctgatggtggccagtcttctcgagaca
attcttatcataaatattcaatgtggctccactcactatggacccttacctcgatgggcc
aaggtgcttttcctcaactatgttgccaaacttgttcgtttaagcaaaaaaaccaatgac
caaaactgtgatcctgaagagcgcagaactgagaccaaacgctgtgatcctccatttgaa
acctctcagagtgaagcaacacataagacacctgctcttctggaactgaagaagataagc
cacgaattacaatccatccgtcagcaggttgataaacaattgaaaactgatgagagcgca
gacgagtgggtgcatttgggtcaagtcattgaccgcttgcttttttgcctgtatattgtg
tttctttcagttagttttatcaccattgtagtcttttggatatactggtaccggaaaaat
gcatctttaatataa
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