Garra rufa (doctor fish): 141338276
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Entry
141338276 CDS
T11039
Symbol
bcdin3d
Name
(RefSeq) pre-miRNA 5'-monophosphate methyltransferase
KO
K25191
RNA 5'-monophosphate methyltransferase [EC:2.1.1.-]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
grf03016
]
141338276 (bcdin3d)
Transfer RNA biogenesis [BR:
grf03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
141338276 (bcdin3d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bin3
Methyltransf_12
Methyltransf_25
Methyltransf_31
Methyltransf_36
Methyltransf_32
Methyltransf_23
DUF6961
Motif
Other DBs
NCBI-GeneID:
141338276
NCBI-ProteinID:
XP_073699921
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All DBs
Position
7:1738774..1740869
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AA seq
252 aa
AA seq
DB search
MEAHVPHVNEEENEDPGAAPYGNFINYYSFNPPENRLSLIPETLLENIGLVSERVLILDV
GCNSGDLSVALYKHLLHEEASGSDFPQREVYLLGFDLDQDLIHRAQTSNPIPQNIQFIPL
DITDDSKSQTVLESYLRKYGCPRFHLCTCFAVTMWVHLNHGDAAFLSLLSKLASLCEYLL
LEAQPWKCYRSAARRFRKLGRSDFDHFKTLEIRGDMAAHAREHLEKQCSMELVQCFGNTT
WDRSLLLFKRRQ
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggaggctcacgttccccatgtgaatgaagaggaaaatgaggatccaggagctgctcct
tatggaaacttcatcaattattactccttcaacccgccagaaaatcgcctcagtttgata
ccagaaacgctgctggaaaacattggactcgtttctgaacgtgttttaatactggacgtg
gggtgtaactcaggggacttgtctgttgctctctacaagcatttattgcatgaagaagcc
tctggaagtgactttcctcagagggaagtctatctgcttggatttgacctggaccaagat
ttaatccatcgggcacaaacctccaacccaattccccagaatatccaatttatccccctg
gatatcacagatgattcaaagagccagacagtactagaatcctatttgagaaagtatggc
tgcccccgtttccacctgtgcacctgttttgcggtcactatgtgggttcatctaaatcat
ggagacgcagcgtttctctctctcctctccaaactggcgtctctttgtgagtatctgctg
ctagaggcgcagccgtggaagtgttatcgctctgctgcacgccggtttcgcaaactgggg
cgcagtgattttgaccacttcaagactcttgagattcgaggggacatggcggcgcatgct
agagagcacttggaaaagcagtgcagcatggagttggtgcagtgtttcgggaatacaaca
tgggatagaagtcttctgctcttcaaaagacgacaataa
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