Garra rufa (doctor fish): 141338316
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Entry
141338316 CDS
T11039
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141338316 (sox2)
Transcription factors [BR:
grf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
141338316 (sox2)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
141338316
NCBI-ProteinID:
XP_073699950
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All DBs
Position
7:complement(44759233..44761259)
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AA seq
315 aa
AA seq
DB search
MYNMMETELKPPAPQPNTGGTGNTNSSGNNQKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGGNAMGAGVGVGAGLGAGVNQRMDSYAHMNGWTNGGYGMMQEQLGYPQH
PGLNAHNTAQMQPMHRYDMSALQYNSMTNSQTYMNGSPTYSMSYSQQSTPGMTLSSMGSV
VKSESSSSPPVVTSSSHSRAGQCQTGDLRDMISMYLPGAEVQDQSAQSRLHMSQHYQSAP
VPGTTINGTIPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggaaaccgagctgaagcccccggcgcctcagccgaacacggggggc
acgggcaacaccaactcttcaggaaacaaccagaaaaacagcccggaccgggtcaagaga
cccatgaacgccttcatggtgtggtcgcggggccagaggaggaaaatggcacaggagaac
cccaaaatgcacaattcggaaataagcaagcgactcggggccgagtggaaacttctgtcc
gagagcgagaagcggccgttcatcgatgaagccaagcgccttcgggctctccacatgaag
gaacacccggattacaaataccgaccccggaggaaaaccaagaccctcatgaagaaggac
aagtacaccctgccgggtgggctcctggcgccgggcggcaacgccatgggcgccggtgtg
ggtgtaggggccggcttgggcgctggggtcaaccagaggatggacagttatgcccacatg
aacggctggaccaacggaggctacggcatgatgcaggagcagctgggttacccgcagcac
ccgggactgaacgcacacaacacggcacagatgcagcccatgcaccgctacgacatgagc
gcgctccagtacaactccatgaccaactcgcagacctacatgaacggatcgcccacctac
agcatgtcctattcgcagcagagcacgccgggaatgacgctgagctccatgggctcggtg
gtcaagtccgagtccagttcgagtccgccggtggtcacatcgtcctctcactcccgggcc
ggacagtgtcaaacgggggacctgcgggacatgatcagtatgtacctgcccggggcggaa
gtccaggatcagagtgcccagagcagactgcacatgtcccaacattaccagagcgcacct
gtgcccggcacaacgattaacggcacgattcccttatcgcatatgtaa
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