Garra rufa (doctor fish): 141338355
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Entry
141338355 CDS
T11039
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M-like isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
grf Garra rufa (doctor fish)
Pathway
grf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141338355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141338355
Spliceosome [BR:
grf03041
]
Common components
Common spliceosomal components
hnRNP proteins
141338355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_MARF1
RBD_DEAH11
RRM_5
RRM_3
DUF7552
Motif
Other DBs
NCBI-GeneID:
141338355
NCBI-ProteinID:
XP_073699978
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All DBs
Position
7:26820015..26831507
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AA seq
579 aa
AA seq
DB search
MKKAVEKVNKHVMNGRPLKVKEDPDGVIAQREANRGHGGGGGGGPPMGGGMGGGMGGGMG
GGMGMGMGPGPGGPSMVNIPPSLMNNPNIPNEIIHGLQAGKIGSTIFVANLDYKVGWKKL
KEVFGMAGAVVRSDILEDKDGKSRGMGTVTFEMPIEAVQAVSMFNGQLLFNRVMHVKLDE
KSLPKGDFAPPDRPPALPRGLSGVGLGLGPGGQPIDATQLNRGGMGNMGPGGMDGMGFGG
MGRMGGMDNFGSGMNNMDRFGPSGMGRMNDMDRGIGGGFDRDFSGRNDMGMSRSNFGDSF
DRGMAGNSMGMDRMNSGMDRLGGGGGGGSGMDRMGGLDRMGGMDRMDRMSDLDRLGSGFD
RMGSGLDRLGGPTMDRLGSGLDRMSSSVDRMGPGGFDRLGPSSMDRMSGGMDFSSPMGID
RMNSGLDRMGSNFDRMGSGGMDRFQSSGLDRMGSGMDRMGSGGIGGQFDRPTDMDRGTFG
TPFSGSGQGGPGAGGANARKGCQIFVRNLPFDFTWKMLKDTFNTCGIVQYADIKMENGKS
KGCGVVRFDSPETAERACRTMNGYRLNGREIDVRIDRNA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggctgttgagaaagtcaacaaacatgtcatgaatggtcgccctcttaaggtc
aaagaggacccagatggagtgattgcccagcgtgaagctaaccggggtcacgggggtggc
ggtggtggtggaccaccaatgggaggaggcatgggtggaggaatgggaggaggcatgggt
ggcggaatgggcatggggatgggcccagggcctggcggtccttcaatggtcaacatccct
cccagcctcatgaacaacccaaacattcccaacgagatcatccacggactccaggctgga
aaaatcggaagcaccatctttgtggccaatctggactacaaggtgggatggaagaagctc
aaggaggtgtttggaatggctggagcagttgtgcgttcagatatcctggaggataaagac
ggcaagagcaggggaatgggaaccgtcacgtttgagatgcccattgaggccgttcaagca
gtctctatgttcaacggacagctcctcttcaacagggtcatgcatgtcaaattggatgag
aaatcccttcccaaaggtgactttgcacccccagatcgtcctccagcacttcctcgtggt
ctgagcggtgttggtcttggtctgggacctggcggtcaacccatcgacgctacccagctc
aaccggggtgggatgggaaacatgggaccaggaggaatggatggaatgggatttggtggc
atgggtagaatgggagggatggataattttggaagtggtatgaacaacatggatcgtttc
ggcccttctggaatgggaagaatgaatgatatggatcgtggaatcggcggtggctttgat
agagatttcagtggccgtaatgacatgggtatgtcccgcagtaacttcggcgactctttt
gaccgaggaatggcagggaactcaatgggaatggatcgcatgaattctggcatggaccgg
cttggcggcggtggtggtggcggcagtggcatggaccgcatgggaggactggaccgcatg
ggaggaatggatcgcatggaccgcatgtctgatctggatcgcttgggatccggcttcgac
cgaatgggttcagggctcgaccgactgggggggcccactatggatcgtctgggatcaggc
ctcgaccgcatgagctccagcgtggaccgcatgggccctggtggcttcgaccgtttgggc
ccgtccagcatggatcgcatgagtggcgggatggacttttcctcacccatgggcatagat
aggatgaactcgggccttgacagaatgggttcgaacttcgaccgcatgggctccggtggc
atggaccgcttccagtcttcaggtctggaccgcatgggttccggcatggaccggatgggc
tctggtggcatcggtgggcagtttgacagaccgactgatatggatcgtggcaccttcggg
actcctttcagtgggtctggacaaggagggccaggagctggtggagccaatgccaggaag
ggttgccagatttttgtcagaaatctgccctttgacttcacttggaagatgttgaaggac
actttcaatacatgtggcatcgtgcagtacgcagacataaagatggagaacggcaagtcc
aagggctgcggtgtggtgcgttttgacagtcccgagaccgccgagcgagcctgtcgtacc
atgaacggctaccggctcaacggacgagagattgacgtcaggattgacaggaatgcataa
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