Garra rufa (doctor fish): 141338387
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Entry
141338387 CDS
T11039
Symbol
psmd1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1
KO
K03032
26S proteasome regulatory subunit N2
Organism
grf Garra rufa (doctor fish)
Pathway
grf03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
141338387 (psmd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
grf03051
]
141338387 (psmd1)
Proteasome [BR:
grf03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
141338387 (psmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
Zip
Nop52
Cnd1
CIS_TMP
NatA_aux_su
TASL
PA26
Tim54
SLC52_ribofla_tr
Motif
Other DBs
NCBI-GeneID:
141338387
NCBI-ProteinID:
XP_073700021
LinkDB
All DBs
Position
7:45236078..45325317
Genome browser
AA seq
972 aa
AA seq
DB search
MITSAAGIISLLDEDEPQLKEFALQKLNSIVNDFWAEISESVDKIEVLYEDETFRSREFA
ALVASKVFYHLGAFEESLNYALGAGDLFNVNDDSEYVETIIAKCIDHYTKLRVENAELPE
DEEKKSIDPRLEGIVNKMFQRCLGDHMYKQAIGIALETRRLDIFEKTILESSDIGGLLAY
SLKICMSLMQNKKFRNEVLRVLVKLYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKE
DNLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIPAVPGSTNTGTVPTQEKDSDAMET
EEKAGSSPAGKAAEVKAEPKDQNSKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDA
VRNSVCHTATVIANSFMHTGTTSDQFLRENLEWLARATNWAKFTATASLGVIHKGHEKEA
LQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLSQLKNASNDIVRHGGAL
GLGLAALGTARQDVYDLLKSNLYQDDAVTGEAAGLALGLVMLGSKSAQAIEDMVGYAQET
QHEKILRGLAVGIAMVMYGRMEEADTLIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAI
RRLLHVAVSDVNDDVRRAAVESIGFILFRTPEQCPSVVSLLSESYNPHVRCGAAMALGIC
CAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQSEVTCPKVNQFRQLYSKVIND
KHDDVMAKFGAILAQGILDAGGRNVTISLQSRTGHTHMPSVVGLLVFTQFWFWFPLSHFL
SLSFTPTAIIGLNKDLKMPKVQYRSNCKPSTFAYPPPLEVPKEKEKEKVSTAVLSITAKA
KKKEKEKKEKEEEKMEVETQAEAEKEKEKKDEEKEKEKEKEKEKEKKKEPEPNFQMLENP
ARVMPAQLKVLNMPESCRYQPFKPLHTGGIIILKDTSEEEEELVEPVSAHGPKIEEEEQE
PEAPEPFEYIDE
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgatcacttcagcagctggtatcatttctcttctggatgaagatgagccgcagctcaag
gagtttgcgctacagaaactgaactccattgttaatgacttctgggctgagatttcagag
tctgtcgacaaaatcgaggtcctgtatgaggatgagacgtttcgtagcagagagtttgca
gcactggtggcgtctaaagtcttttaccacctcggtgctttcgaggagtctttaaactac
gcacttggtgctggagatctcttcaacgtcaatgacgattcagaatatgtggagaccatt
attgccaagtgtattgatcattacaccaaactgcgtgttgagaacgccgagctgccagag
gatgaggagaagaaaagcatcgaccctcgtctggagggaatcgtcaacaagatgttccag
cgctgcttgggagatcacatgtacaaacaagccatcggcatcgcgctggagacccgacgc
ttggacatcttcgagaaaaccatcctggaatctagcgacatcggtggtttgctggcctac
agcctgaagatctgcatgtccctcatgcagaacaagaagtttcgcaacgaggtgctccga
gttctggtcaagctgtacatgaacctggagaagcctgacttcattaacgtttgccagtgt
ctgattttcctcgacgaccctcaagctgtgagtgacattctggagaagcttgtcaaagag
gacaatctcctgatggcctatcagatctgctttgacctgtatgagagcgccagccagcag
ttcctgtcgtctgtcattcagaacctgaggaccgtaggaacacccatcccagccgtgccc
ggatccaccaacaccggcacggtgcccacccaagagaaagacagcgacgccatggagacg
gaggagaaagctggcagttctccagctggaaaagctgctgaagtgaaggctgagccaaaa
gaccagaactcgaaaatgatcaaaatactgagtggtgaaatggccatcgagctgcacctt
cagttcctcattcgaaacaacaacacagatctgatgattctcaaaaacacaaaggatgcg
gtgcgaaattcggtttgtcacacggcgacggtcatagcaaattcattcatgcacacagga
acaacgagtgaccagtttctacgagagaatttggagtggctggcaagagcaactaactgg
gccaaattcacagcaacagccagtcttggggtcattcacaagggccatgaaaaggaagca
ttacagttaatggccacttacctgcctaaagacacctcgccaggatcagcctatcaggaa
ggaggagggctgtatgctcttgggctgatccacgctaatcacggaggggacatcattgac
tacctcctgagccagctgaagaatgccagtaatgatattgttcgtcacggtggcgctctg
ggtctcgggttagctgcactaggcactgctcgccaagacgtctacgatctgctcaaatca
aacctctatcaggatgatgccgtaacaggagaggcagctggtcttgctctggggctggtg
atgttgggctcaaagtcggctcaggccattgaggacatggtgggttacgctcaagagacc
cagcacgagaagatcctgcgtggactggctgtgggcatcgccatggtcatgtacggaagg
atggaggaggctgatactctaattgaaagtctatgtagagataaggaccccatcctgcgc
cgctcgggaatgtacacagtggccatggcgtactgcggctctgggaacaacaaagccatc
cgacgactgctacacgtggctgtaagtgacgtgaacgatgatgttcggagggctgccgtc
gagtccattggattcatcttgttcaggactccagagcaatgtcccagtgtggtttctctg
ctgtctgagagctacaatcctcatgtccgctgcggcgctgcgatggctctgggcatctgc
tgtgctggcactgggaacaaggaagcgatcaatctcctggagcccatgaccaatgacccg
gtgaattacgtaagacagggcgctctgatcgcctcggctttgatcatgatccagcagtcg
gaggtcacctgtccaaaggtgaaccagttcagacaactttactcaaaggtgatcaacgac
aagcacgacgatgtgatggccaaatttggggccattctggctcagggcatcctggatgca
ggtggacgcaacgtgacaatctctctgcagtcacgcacgggccacacccacatgccatct
gtggtgggtctgttggtcttcacccagttctggttctggttcccgctctctcacttcctg
tctctgtccttcacacccacggctatcattggcctcaacaaagatctgaagatgccgaag
gtgcagtatcgatccaactgcaaaccctccacctttgcctaccctccgcctttggaagtg
ccaaaggagaaagaaaaagagaaggtctccaccgctgttctgtccatcacagctaaagcc
aagaagaaggaaaaggagaagaaagagaaggaggaggaaaagatggaagtggaaacacaa
gcagaggctgagaaagagaaagagaagaaagacgaagagaaggagaaagaaaaagaaaaa
gaaaaagaaaaagaaaagaaaaaagagcccgagccaaacttccagatgttggagaaccca
gcccgtgtcatgccagcccagctcaaggtcctcaacatgcccgaaagctgcagataccag
cccttcaaacctttacacacaggtggaatcatcatcttgaaagacaccagtgaggaagag
gaggagcttgtggagcccgtgtccgctcacggtcctaagattgaggaggaagaacaggag
ccagaggccccagaacctttcgaatacatagatgagtga
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