Garra rufa (doctor fish): 141338454
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Entry
141338454 CDS
T11039
Symbol
uhrf1
Name
(RefSeq) E3 ubiquitin-protein ligase UHRF1
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141338454 (uhrf1)
03036 Chromosome and associated proteins [BR:
grf03036
]
141338454 (uhrf1)
Enzymes [BR:
grf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141338454 (uhrf1)
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141338454 (uhrf1)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
141338454 (uhrf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTD
SAD_SRA
ubiquitin
PHD
zf-C3HC4_2
zf-C3HC4
zf-RING_10
PHD_2
zf-RING_2
zf-RING_UBOX
Rad60-SLD
zf-RING_5
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
141338454
NCBI-ProteinID:
XP_073700103
LinkDB
All DBs
Position
7:2856773..2885787
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AA seq
778 aa
AA seq
DB search
MWIQVRTMDGKETHRVDSLSKLTKVDELRVKIAELFNVEPERQRLFYRGKQMEDGHTIFD
YNVGLNDIVQLLVRQASAPLPKDKEAELSDSDSGCGSAQSESDKGSTHGESDGQNAGTSG
QTDTPDLIDPGFGFYKINEFVDARDLNMGAWFEAQIINVTKATKSTEDEGTDGEEEIIYH
VKYEDYPENGVVQLRGKDVRPRARTVYQWHQLEQGMIVMVNFNPDEPKERGYWYDAEIQR
KRETRTQREVYGKILLGDAGDSLNDCRIMFVTEIYKIEEPGSAEGPGASSDSPLKRSNGP
ECKVCKDDPKKNCRVCNCHVCGVKQDPDKQLLCDECDMAFHTYCLNPPLTTIPEDEDWYC
PECRNDASEVVLAGEKLKESKKKAKMASASSSSQRDWGKGMACVGRTKQCTIVPSNHHGP
VPGVPVGTLWKFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDDGNEFTYTG
SGGRDLSGNKRTAEQSCDQKLTNMNRALALNCNAAVNDKEGAEAKDWKAGKPVRVVRSSK
GRKHSKYSPEDGNRYDGIYKVVKYWPEKGKSGFLVWRYLLKRNDDEPAPWTRDGKERIKK
LGLTMQYPEGYLEAVAAKEKEKENKNDEEVDETPTKGKRKRKSQTVEEKSSPAKSTPKKM
KVEAYKLNKEQKALIKDDELNKKLWDEAMDSLNLGPRFINKVEEVFLCICCQEVVYQPIT
TECQHNVCRECLQRSFKAEVYTCPACRHDLGKNYQMTVNKPLQAILTQLFPGYSSGRC
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgtggattcaggtgcgcactatggatggaaaggagacccatcgggtcgactccctgtcc
aagctcaccaaggtggacgagctgcgagtgaagatcgccgagctcttcaacgtcgaaccc
gagaggcagcgactcttctaccggggcaaacagatggaagacggtcacaccatcttcgac
tataacgtcgggttaaacgacatcgtccaacttctggtgcgtcaggcgtctgcaccgctg
ccgaaggacaaagaggcagagctgtccgactcagactccggctgcggatcggctcagagc
gagtccgataagggctccacgcatggagagagcgacggccagaacgccggcacctcgggc
cagaccgacacgccagacctcatcgatccaggttttggcttttacaagataaatgagttt
gtggacgctcgagacttgaacatgggcgcttggttcgaggcgcagatcattaacgtgacg
aaagctacgaagtccacagaagacgaaggaactgatggtgaagaggagatcatttaccac
gtcaaatacgaagattaccccgagaacggcgtggtgcagctgcgcgggaaagacgtgcgt
ccgcgggcgcgcaccgtctaccagtggcaccagctggagcagggcatgatcgtgatggtg
aacttcaaccccgacgagcccaaggagcgcggatactggtacgacgccgagattcagagg
aagagggagacgcgcacccagcgcgaggtttacggcaagatcctgctcggagacgccggc
gattctctcaacgactgtcgcatcatgttcgtaaccgaaatctacaagatcgaggagcca
ggaagtgcggagggtccaggagcctcttctgacagccctctaaagaggtcgaacggaccc
gagtgcaaggtctgcaaagacgacccgaagaagaactgccgcgtgtgtaactgtcacgtg
tgcggcgtcaagcaggatcccgacaaacagctgctgtgtgacgaatgcgacatggccttt
cacacctactgcctgaaccccccgctcaccaccatccctgaagatgaggactggtattgt
cctgaatgccgtaacgatgccagcgaggtggttctggccggagagaagctgaaggaaagc
aagaagaaggccaagatggcgtctgcgagctcatctagtcagagagactgggggaagggt
atggcgtgtgtgggccgcaccaaacagtgcaccatcgttccctccaaccatcacggccct
gttcctggagtcccagtgggaacactctggaaatttagagtgcaggtgagtgaatcaggt
gtccacaggcctcacgtggccggcattcacggcagaagtaacgacggcgcttactccctg
gttctggccggaggctacgaagacgatgtggacgacggtaatgagttcacctacacgggc
tccgggggtcgagatctctcaggaaacaaaaggacggccgaacagtcctgcgatcagaag
ctcaccaacatgaacagggctctcgctctgaactgtaacgcggcggtaaacgacaaggaa
ggcgctgaggccaaagactggaaagctggaaaacccgtgagagtggtgcgcagctccaaa
ggacgcaaacacagcaagtactctcctgaagacggcaaccgctacgacggcatttacaag
gtggtaaaatactggccagaaaagggtaaatccggcttcctggtttggagatacttgcta
aaacgaaacgacgacgaaccagcaccatggacccgcgacggaaaagagcgcattaagaaa
ctaggcctcacaatgcagtatcccgaagggtatctggaagccgttgctgcgaaagaaaag
gaaaaagagaacaaaaatgacgaagaagttgacgaaacgcccactaaaggcaagaggaag
agaaaatcccagaccgtggaggagaagagctctccggccaaaagcacgcctaagaagatg
aaggtggaggcgtacaaactgaacaaagagcagaaggccttgatcaaggacgacgagctc
aacaagaagctgtgggacgaagccatggactctctgaacctcggacctcgcttcatcaac
aaagtggaggaagttttcctgtgcatctgctgccaagaagtcgtctatcagcccattact
acagaatgccaacacaacgtctgcagggaatgccttcagcgatctttcaaagccgaggtc
tacacctgtccggcttgccgacacgatttgggcaagaactaccaaatgacggtgaacaaa
cccctccaagccatcctcacccagctcttccccggatacagcagcggccgatgttga
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