Garra rufa (doctor fish): 141338562
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Entry
141338562 CDS
T11039
Symbol
nisch
Name
(RefSeq) nischarin isoform X1
KO
K24095
nischarin
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
grf04990
]
141338562 (nisch)
Domain-containing proteins not elsewhere classified [BR:
grf04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
141338562 (nisch)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
LRR_4
LRR_8
LRR_9
LRR_NXF1-5
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
141338562
NCBI-ProteinID:
XP_073700249
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All DBs
Position
7:complement(18683462..18709234)
Genome browser
AA seq
1419 aa
AA seq
DB search
MDAPHLPEQSAEKRVRIVGSELVENYTVYIIEVNVGEHSWTVKHRYSDFYDLHEKLTVEK
KIDKHLLPPKKIIGKNSKSLVEKRQKELEVYLQTLLSRFPASTPKVLSNFLLFHLYEING
IAEALAEELFHKGEQLLAAGEVFLLRPLQLYAVTQQLKLAKPTCANGDAKADLGHILDFT
CRLKYLKIPGKKAKVGTSNIEEQSLPFDLSIFKSLLQIEISDCDAGQVTGLPSLKPTLAT
LSTHLSASSMKEIIVPEASEFAQWEPEGVDTDCPVTAIIPTWKMLTTLDMSRNSIRCIDE
SVKLIPEVEFLDLSYNELSLVENLQHLYNLVHLDLSFNKLMVLEGVHTKLGNIKTLNLSG
NQLETLSGLSKLYSLVNLDLSSNRLAQLDEIKQIGTLPCLEKLSLADNPMCIIPDYRTKV
LAQFCDRASEVCLDGTTTTEKELDTVEVLKAIQKAKEAKGRMANNEKKVSDVPGQAVGGP
QSSSSSLVAPPSSSSPSLSRSTCSSQEINTCKEKAFITKDILTPVDSTLTQRCYDVYSSA
CDVIPQVETQIDSGLSSEVNFESSPCCCEEEWKPWTTSLSNLFVPPSLLSYTIANQEFTN
QLSAHISQANKESTPIPCETTSLEGTNQGSPQSGDGYFEMTLDDTNEIMGCSSSSTVQEK
TPDDVKKDSAVDHVKMVAWSLCISVGEGLSQRPSCLVATDSSLVVFHTRSEESISNLEEL
MENLDVDLVVPYTNIETFQFDIPEVCVSMKVKSSNTRWYFFSEAQSLKEIHSCVVPLVDQ
TNEQVLNSSNTQLFIRQFLNTWDFEESEDSVKGGHLIHFLNPESSTSDKNVDNNPQFPKI
SVPSDVLSQIGLFESDQDQTSNPMILFLTSRHLCVLKVDFIALASRDPSEASVTRNCSKV
TRIPLSFTLLDPKQGCLCSAISNSRRFYNEHVVELMPGHERLTVVFALSQDKFTFLREFT
RLRSNLKEIKTIALQHTKKGHSKMHNCPTPATATQRMPTSSVPQEVPRPHLTLSLLYPAK
SLIQQLMEDNQCPSHLSLSSSLLLISSLKGDQLVHFFHDNIAEMENEELKHILWTSVLFY
RSPDVETTACVLLSTKAIYFILDDTASSLTNQSTMWTWHPSEHKDTDFLISFSFTLKLKD
LQSVNVGLFDQYFRVVGPSADHIISCLTRDGYGTHRFLQQLMMVLSLLEKVPSPEPSELD
FYSQFGNKSTGKMENYELVHSSKVKFVYPSEEEIGDLTFIVAERKTPQAPSHSFNILLYV
LVFQVHVVPGQTTQIQTVLHPKTLILTSTDVFLLDEDHISYPLPEFAKEPPQRDKYRLTD
ARRIRDLDRVLMGYQTYPQALTLVFDDVPGPDLLCHLTMDHFAESDGKGDRTQGLGGAEG
EVQWCIFVPGADSRERLISLLARQWETLCSRELPVELTG
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgccgcatctaccggagcagagcgcggagaaacgcgtccgcatcgtcggatcc
gagctggtggagaattacacggtttacatcatagaggtgaatgttggagagcacagctgg
accgtgaagcaccgatacagcgacttctacgatttgcacgaaaaactcactgtggagaag
aagatcgataaacatctgttgccgcccaagaagatcatcggcaaaaattccaaaagcctc
gtcgagaagcgacagaaggagctggaggtttatctccaaacactgcttagccgatttcca
gcgtcgacccctaaagtcctgtctaacttcttactctttcacttatatgaaatcaatgga
attgctgaagccctggctgaagagctctttcataagggtgagcagttgttggctgcaggc
gaggtgtttctcctcaggccgctccagttgtacgccgtcacacagcagctgaaactcgcc
aagcccacctgtgccaacggagatgccaaagccgacctcggacacatcctggacttcacc
tgccgcctcaagtacctcaagatccctggaaagaaagcaaaagtggggacgagtaacatc
gaggagcagagcctgccgtttgacctgtccatctttaaatcgctgcttcagatcgagatc
agtgattgtgatgctggacaggtcacaggtctgccttccctaaagcccacactggccaca
ctcagcacacatctctcagccagcagcatgaaggaaataatagttcccgaagcgtctgaa
tttgcacagtgggaacctgagggtgttgatacggactgtcctgtgacggcgatcattcct
acatggaagatgctcactactttggacatgagccgaaactccattcgttgcattgacgag
tcggtgaaactgattcctgaagtcgaattccttgatctcagctataatgagttatctcta
gtggaaaacctccagcatttgtacaacctggttcacctggatctgtccttcaacaaactc
atggttttagagggcgttcacaccaaactggggaatatcaagactttgaatctgtctggg
aatcagctggagacgctttccggcctcagtaaactgtactccttggttaacttggattta
agcagcaaccgattagcacagctggatgaaattaaacaaatcggcactcttccctgtctg
gagaaactgtctctggcggataaccccatgtgcatcatcccagattacaggacaaaagtt
ttggctcagttctgcgaccgggcctccgaggtgtgtttggatggtacaaccaccacagag
aaagagctcgacacggtggaggtgctgaaagccattcaaaaagcaaaagaggccaaaggc
cgaatggctaacaatgagaaaaaggtgagtgacgtcccggggcaggccgtgggcggccca
cagtcctcttcgtcctctctcgtcgcgccaccctcctcttcctccccctctctgtcgcgt
tccacctgctccagtcaagaaataaatacttgtaaagaaaaagcttttattaccaaagac
atattaactcctgtggattctacacttacccagagatgctacgatgtttacagctcagcc
tgtgatgtcataccacaggttgaaactcaaattgattccggtttgtcttcggaggttaac
tttgagagcagcccctgttgctgtgaagaggagtggaaaccttggaccacaagtctttcg
aatctctttgtacctccttccttattgtcctacaccatcgccaatcaagagtttacaaac
cagctttctgctcacataagccaggctaataaagaatcaaccccgataccttgcgaaacc
acatctcttgagggcacaaaccaggggagccctcaatctggagatgggtactttgagatg
acactagatgatactaacgagatcatgggttgttcctcctcgtctaccgttcaggaaaag
acaccagatgatgtgaagaaggactctgcagttgatcatgtgaaaatggtggcttggtct
ctatgcatcagtgttggagaaggtttaagtcagcggccatcttgtttggtggcaacagac
agttcgcttgttgttttccacacaaggtcagaagaatcaataagtaacttggaggaacta
atggagaaccttgatgtagacttggttgtgccatacaccaacattgagacctttcagttt
gatattccagaggtttgtgtctctatgaaggtgaagtcaagcaatacacgatggtacttc
ttctcagaggcccaaagtctgaaggagattcactcctgtgttgttccacttgtggaccaa
actaatgagcaagttttgaactcctctaacactcaactgtttatccgacagtttctgaac
acttgggactttgaggaaagcgaagacagtgttaaaggtggacacttgatccatttcctt
aatccagaatcatctacctccgacaagaatgtcgataacaacccacagtttccaaagatc
tcagtaccctcagatgttttatcccaaatcggcctgtttgaaagtgatcaggaccaaacc
tccaatcccatgatccttttcttgacctctcgacacctctgtgttctcaaggtagacttt
attgctctagcgtcccgggacccttcggaagcgagtgtgacgcgaaactgttccaaagta
acccgtatcccactctcgttcacactcctcgacccaaagcaggggtgtttgtgtagcgcc
atctcaaactctcgccgtttctacaatgaacatgttgtagaactgatgccgggtcacgag
cgcctgactgttgtttttgccctttcacaagacaagttcacattcctgagagagtttaca
aggcttcggtccaatctgaaggaaattaagaccatcgccctccagcacaccaagaagggc
cactcgaaaatgcacaattgtcccactcctgctacggccacacaaagaatgcctaccagc
agtgtccctcaggaggtgccaaggccccatctgaccctgtctctgctgtatccagccaaa
tccctcattcagcagctgatggaggacaaccaatgtccctcacacctctcgctctcctcg
tcattactcctcatctcatctctcaaaggagaccagctcgttcacttcttccatgacaac
attgcagagatggaaaacgaggaactgaaacacatcctatggacgtcggtgctcttctac
agatctcctgatgtggagacaacggcctgtgtcttgctgtccaccaaagcgatttacttc
atcctggatgataccgcatcctcactcaccaaccaatcaacaatgtggacctggcaccct
tctgagcacaaggacaccgatttcctcatctccttcagctttaccctcaaactgaaggac
ctgcagagcgtcaatgtgggcttgttcgatcagtacttcagagttgtggggccctcggct
gatcacatcatttcctgtctgacccgtgatggttacggcacacaccggttcctgcagcag
ctgatgatggttttgtccttactggaaaaagttccctctcctgaaccttctgaactggat
ttctactcgcagtttggaaacaaaagcacaggtaaaatggagaactatgaactggtccat
tccagcaaagtgaagttcgtatatccgagtgaagaagagattggagacctcaccttcatc
gtagcggagaggaagacccctcaagcgccgtctcactccttcaacatccttttgtatgta
ctggtgttccaggtccacgtcgttccgggtcagaccacccagatccagaccgtcctacac
cctaagactcttattctcaccagcacggatgtctttctcctagatgaagatcacatcagt
tacccgctaccggaatttgcaaaagagccaccgcagagagataagtaccgcctcacagat
gccagacggatacgtgacctggaccgtgtgctaatgggttaccagacttacccacaagcc
ctcacactggtgttcgacgacgttcccggaccggatctgttgtgccaccttaccatggac
cattttgcggagagtgacgggaagggtgacaggacgcaggggctcggaggagctgagggg
gaagtgcaatggtgtattttcgtacctggagcggacagcagagagcggctgatatcgctc
ttggctcgccagtgggagacgttgtgtagccgagagttgccggttgagctaacaggataa
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